Difference between revisions of "Lnc-TAOK3-1:6"
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sequence = <dnaseq>CAGTGCCTCACCCCTCGGAGGAATTAACAAAAATACGGAGGCTGGTGGGACCTCAACCCCAGCTGGTATCCAGGCTCTTGACACCATCTGGAGAAGGAATTCAAGAGTGTGTCAGAAAATGATGAAAGTACAAAGATTTATTGCAAAGCGAAAAATACACACTCAAGAAAGGGGAGTATGGGTGGACTCAAGACAGAGTCCGATGGGACTTGGGGTTTCTACCTTTTGGGTTTCTTTTTTTTTTTTTTTTGATATGGAGTCTCGCACTGTTGCCCAGGCTGGAGCGCAGTGGCGTGATTTTGGCTCACTGCAACCTCTGCCTCCCGGGTTAAAACGATTCTCCTGCCTCAGCGTCCCAAGTAGCTGGGATTACAGGCTCCCACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGAGGCCTCACCATATTGGCCAGGCTGTTCTCGAACTCCGGACCTTAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAATGGGTGTGGGATTTAGTATATTAATGAGTGTATAATGAGGTCCTTGGTGAAACCTACATCAAATCCAGCACCGTGTTGGGTCCAGTCTGTCTTAGCCAGCTTGGTCCACACCCTGGTTTTTTAGGGTCTTATTGGCCCCTTACTTCTGCAGCAAAAGTTTCCTTTTGCTAGTCATGTGAAACTGCCACCTGGAATTTTCTATTCTCTAGTGACCACCCTGTATTATTCCTGTCTCACTGGGACCCTAAGAAATTGGGAATTCCAACTACACATCCAAAATAGTTTGACTAAAACTGTTGAAAAAAGAAAAAAATAATGGCATAAAGTATTGCTTGACTAAATTCCAGCCAGGTGCATTGGCCACTTTAGGTCGGGTGTGGTGGCTCATGCTTGTAATCCCAGCATTTTGGGAGGCTGAGGCGGGAGGATCACTTGAGGTCAGGAGTTCCAAACCAGTCTGGCCAAAATGGTAAAACCCCCTCTCTACTAAAAATACAAAAATTAGCCGGACCTGGTGGCGGAAGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCACGAAAATTGCTTGAACCCAGGAGGTGGAGGTTGCATTGAACCAAGATCATACCACTGCACTCTAGCCTGTGTGACAGAGAAAGATTCCGTCTCAAGAAACAAAAACAAAAATGAAAAACAAACAAAAAGAAAGCCCATTCTATCTTTTTTATTTTTTATTTTTTTGAGACAGGGTCTCGCTCTGTCACTCAGGCTGGAGTGCCACAGCGCGATCTCTGCTCACTACAACCTCCATCTCCCAGGCTCAAGCACTCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGCACAGAAACCCCACTGTAAATAAAGAGAGGTAGGCTTTTAAAAATGTCACTCTGTTCACAGTAAGGCAAGCAAGGGAAGCAAAATCAATTTCTTTCTAGAGGTGGGATAATGGGTAGGGAGTGGAAGACTTTAGGAAAGAGGTGCCCCAGTTTCTGAGTCACTTCATGGCTTCAATATTCATTGACTATCAATCAACAGATGAATGGATATACAAAAGGTGGTATCTCTGTTGCAGCAGGTAGTTAGTCAGAGCTGAGCAGGGAAGGAGAGGCTCCTCCGCCCCATCAGGAGATGATCAGGCAGTTGTTAAACTGTCTCTCTCAAATAATCATTGGTTGCAGCCGATGCCAGGGAAAGACAGTCTCCCAGTAGATAGAAACGCCAGAAACTGGTGATCAGCAGCTTCCCAGTAAGATCTCAGGAGGTGGGTGAGTGGGCTTAAGCATGTGCATGAAGAGGCAAAATGGTTGAGCTTAGCTGGTACATGACCTTCCTCTAGGAACACTCAACTGATAAGGGAAGAACACCTCAAGTGAGCACACATATAGCTTCAGTAAACACACTCACATGCAGCCCCTCCCAAGTGCTGGCAGGCCATTGTACATGCAGACTGCCAACATATAAAACCACAAGTCAAAGGTCAAACCATGCACTTGAATCTCTCAAGGTCCCTACTGGCCCTCTTCCACGTGTACTTTATTTCCTTGCATTCCTGTTCTAAAACTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTTGTTGCTCAGGCTGGAGTGCAATGGCGCGATCTCAGCTCACAGCAACCTCCACCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCATGTGCCATCATGCCCGGCTAATTTTATATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCGGACCTCAGGTGTTCTGCCCACCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCTAAAACTTTTTAATAAACTTTCACTCCTGCTGTGAAACTTGCCTTGGTTTCTTACTCTGTCTTATGCCCCTTGGTTGAATTCTCTCTTCTGAGGAGGCAAGGATTCAGGTTGCTGCAGGCCCGTATGGATTCACTGCTACTAACATCTCCATACAACAGAATATAATTTGGCCATAAAATGAAATGAAGTATTGATACAAGCTACAATGTAGATGAACCTTGAGAACATTGCGTTAAGTGAAAGAAGCCAGTCACAACATATATTGCTTGCTTCTGTTAACATGAAATGTCTGGAATAGGCAAAACCATAGAGACAGAAAGTAGATTCATGATTGCTGGGGGTTGGAGGGGGTGGGGAAATTGTGAGTGTGTCTTAGCCTGTTTTCTGTTGCATATATACCACAGACTGGGTAGGGTAATTTATAAAGAAAAAAAGTATATTTAGTACATGGTTCTGGAGACTGAGAAGTCCAAGAGCATGGAACAAGCATCTGGTGAGGACCTTCTTGCTGTATCATAACATAACAGAGGGCATCACATGGCAAGAGGACAAGAGCAAGAGAGCCAGAGAGCGCTTGCTTTTATAACAAAACCACTCCCACGATGGCAACACTAATCCATTCTTGAGGGTAGAGGGACTGAGTTTCCAACACATGAACTTTTGGAGGACACATTCAAACCATAGCAAGGTGATAGCTAAAGGGTATGGGGTGTCTTTCTGGAGTGATGAAAATCTAAAATTGATGGTAGTTATGGTTGTACAACCTTGTGACTATGCTAAAAGCCATTGAATTGTAGACTTTAACTGAGAGAGTTCTATGGGATGAATTATATCTCAATAAAGC</dnaseq>| | sequence = <dnaseq>CAGTGCCTCACCCCTCGGAGGAATTAACAAAAATACGGAGGCTGGTGGGACCTCAACCCCAGCTGGTATCCAGGCTCTTGACACCATCTGGAGAAGGAATTCAAGAGTGTGTCAGAAAATGATGAAAGTACAAAGATTTATTGCAAAGCGAAAAATACACACTCAAGAAAGGGGAGTATGGGTGGACTCAAGACAGAGTCCGATGGGACTTGGGGTTTCTACCTTTTGGGTTTCTTTTTTTTTTTTTTTTGATATGGAGTCTCGCACTGTTGCCCAGGCTGGAGCGCAGTGGCGTGATTTTGGCTCACTGCAACCTCTGCCTCCCGGGTTAAAACGATTCTCCTGCCTCAGCGTCCCAAGTAGCTGGGATTACAGGCTCCCACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGAGGCCTCACCATATTGGCCAGGCTGTTCTCGAACTCCGGACCTTAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAATGGGTGTGGGATTTAGTATATTAATGAGTGTATAATGAGGTCCTTGGTGAAACCTACATCAAATCCAGCACCGTGTTGGGTCCAGTCTGTCTTAGCCAGCTTGGTCCACACCCTGGTTTTTTAGGGTCTTATTGGCCCCTTACTTCTGCAGCAAAAGTTTCCTTTTGCTAGTCATGTGAAACTGCCACCTGGAATTTTCTATTCTCTAGTGACCACCCTGTATTATTCCTGTCTCACTGGGACCCTAAGAAATTGGGAATTCCAACTACACATCCAAAATAGTTTGACTAAAACTGTTGAAAAAAGAAAAAAATAATGGCATAAAGTATTGCTTGACTAAATTCCAGCCAGGTGCATTGGCCACTTTAGGTCGGGTGTGGTGGCTCATGCTTGTAATCCCAGCATTTTGGGAGGCTGAGGCGGGAGGATCACTTGAGGTCAGGAGTTCCAAACCAGTCTGGCCAAAATGGTAAAACCCCCTCTCTACTAAAAATACAAAAATTAGCCGGACCTGGTGGCGGAAGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCACGAAAATTGCTTGAACCCAGGAGGTGGAGGTTGCATTGAACCAAGATCATACCACTGCACTCTAGCCTGTGTGACAGAGAAAGATTCCGTCTCAAGAAACAAAAACAAAAATGAAAAACAAACAAAAAGAAAGCCCATTCTATCTTTTTTATTTTTTATTTTTTTGAGACAGGGTCTCGCTCTGTCACTCAGGCTGGAGTGCCACAGCGCGATCTCTGCTCACTACAACCTCCATCTCCCAGGCTCAAGCACTCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGCACAGAAACCCCACTGTAAATAAAGAGAGGTAGGCTTTTAAAAATGTCACTCTGTTCACAGTAAGGCAAGCAAGGGAAGCAAAATCAATTTCTTTCTAGAGGTGGGATAATGGGTAGGGAGTGGAAGACTTTAGGAAAGAGGTGCCCCAGTTTCTGAGTCACTTCATGGCTTCAATATTCATTGACTATCAATCAACAGATGAATGGATATACAAAAGGTGGTATCTCTGTTGCAGCAGGTAGTTAGTCAGAGCTGAGCAGGGAAGGAGAGGCTCCTCCGCCCCATCAGGAGATGATCAGGCAGTTGTTAAACTGTCTCTCTCAAATAATCATTGGTTGCAGCCGATGCCAGGGAAAGACAGTCTCCCAGTAGATAGAAACGCCAGAAACTGGTGATCAGCAGCTTCCCAGTAAGATCTCAGGAGGTGGGTGAGTGGGCTTAAGCATGTGCATGAAGAGGCAAAATGGTTGAGCTTAGCTGGTACATGACCTTCCTCTAGGAACACTCAACTGATAAGGGAAGAACACCTCAAGTGAGCACACATATAGCTTCAGTAAACACACTCACATGCAGCCCCTCCCAAGTGCTGGCAGGCCATTGTACATGCAGACTGCCAACATATAAAACCACAAGTCAAAGGTCAAACCATGCACTTGAATCTCTCAAGGTCCCTACTGGCCCTCTTCCACGTGTACTTTATTTCCTTGCATTCCTGTTCTAAAACTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTTGTTGCTCAGGCTGGAGTGCAATGGCGCGATCTCAGCTCACAGCAACCTCCACCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCATGTGCCATCATGCCCGGCTAATTTTATATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCGGACCTCAGGTGTTCTGCCCACCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCTAAAACTTTTTAATAAACTTTCACTCCTGCTGTGAAACTTGCCTTGGTTTCTTACTCTGTCTTATGCCCCTTGGTTGAATTCTCTCTTCTGAGGAGGCAAGGATTCAGGTTGCTGCAGGCCCGTATGGATTCACTGCTACTAACATCTCCATACAACAGAATATAATTTGGCCATAAAATGAAATGAAGTATTGATACAAGCTACAATGTAGATGAACCTTGAGAACATTGCGTTAAGTGAAAGAAGCCAGTCACAACATATATTGCTTGCTTCTGTTAACATGAAATGTCTGGAATAGGCAAAACCATAGAGACAGAAAGTAGATTCATGATTGCTGGGGGTTGGAGGGGGTGGGGAAATTGTGAGTGTGTCTTAGCCTGTTTTCTGTTGCATATATACCACAGACTGGGTAGGGTAATTTATAAAGAAAAAAAGTATATTTAGTACATGGTTCTGGAGACTGAGAAGTCCAAGAGCATGGAACAAGCATCTGGTGAGGACCTTCTTGCTGTATCATAACATAACAGAGGGCATCACATGGCAAGAGGACAAGAGCAAGAGAGCCAGAGAGCGCTTGCTTTTATAACAAAACCACTCCCACGATGGCAACACTAATCCATTCTTGAGGGTAGAGGGACTGAGTTTCCAACACATGAACTTTTGGAGGACACATTCAAACCATAGCAAGGTGATAGCTAAAGGGTATGGGGTGTCTTTCTGGAGTGATGAAAATCTAAAATTGATGGTAGTTATGGTTGTACAACCTTGTGACTATGCTAAAAGCCATTGAATTGTAGACTTTAACTGAGAGAGTTCTATGGGATGAATTATATCTCAATAAAGC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-TAOK3-1]] | + | [[Category:Intergenic]][[Category:lnc-TAOK3-1]][[Category:Transcripts]] |
Latest revision as of 05:26, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-TAOK3-1:6 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
intergenic |
Length |
3241 nt |
Genomic location |
chr12-:118552481..118559339 |
Exon number |
2 |
Exons |
118552481..118555687,118559306..118559339 |
Genome context |
|
Sequence |
000001 CAGTGCCTCA CCCCTCGGAG GAATTAACAA AAATACGGAG GCTGGTGGGA CCTCAACCCC AGCTGGTATC CAGGCTCTTG 000080
000081 ACACCATCTG GAGAAGGAAT TCAAGAGTGT GTCAGAAAAT GATGAAAGTA CAAAGATTTA TTGCAAAGCG AAAAATACAC 000160 000161 ACTCAAGAAA GGGGAGTATG GGTGGACTCA AGACAGAGTC CGATGGGACT TGGGGTTTCT ACCTTTTGGG TTTCTTTTTT 000240 000241 TTTTTTTTTT GATATGGAGT CTCGCACTGT TGCCCAGGCT GGAGCGCAGT GGCGTGATTT TGGCTCACTG CAACCTCTGC 000320 000321 CTCCCGGGTT AAAACGATTC TCCTGCCTCA GCGTCCCAAG TAGCTGGGAT TACAGGCTCC CACCACCATG CCCGGCTAAT 000400 000401 TTTTGTATTT TTAGTAGAGA CGAGGCCTCA CCATATTGGC CAGGCTGTTC TCGAACTCCG GACCTTAGGT GATCTGCCTG 000480 000481 CCTCAGCCTC CCAAAGTGCT GGGATTACAG GCGTGAGCCA CCATGCCCAA TGGGTGTGGG ATTTAGTATA TTAATGAGTG 000560 000561 TATAATGAGG TCCTTGGTGA AACCTACATC AAATCCAGCA CCGTGTTGGG TCCAGTCTGT CTTAGCCAGC TTGGTCCACA 000640 000641 CCCTGGTTTT TTAGGGTCTT ATTGGCCCCT TACTTCTGCA GCAAAAGTTT CCTTTTGCTA GTCATGTGAA ACTGCCACCT 000720 000721 GGAATTTTCT ATTCTCTAGT GACCACCCTG TATTATTCCT GTCTCACTGG GACCCTAAGA AATTGGGAAT TCCAACTACA 000800 000801 CATCCAAAAT AGTTTGACTA AAACTGTTGA AAAAAGAAAA AAATAATGGC ATAAAGTATT GCTTGACTAA ATTCCAGCCA 000880 000881 GGTGCATTGG CCACTTTAGG TCGGGTGTGG TGGCTCATGC TTGTAATCCC AGCATTTTGG GAGGCTGAGG CGGGAGGATC 000960 000961 ACTTGAGGTC AGGAGTTCCA AACCAGTCTG GCCAAAATGG TAAAACCCCC TCTCTACTAA AAATACAAAA ATTAGCCGGA 001040 001041 CCTGGTGGCG GAAGCCTGTA ATCCCAGCTA CTCTGGAGGC TGAGGCACGA AAATTGCTTG AACCCAGGAG GTGGAGGTTG 001120 001121 CATTGAACCA AGATCATACC ACTGCACTCT AGCCTGTGTG ACAGAGAAAG ATTCCGTCTC AAGAAACAAA AACAAAAATG 001200 001201 AAAAACAAAC AAAAAGAAAG CCCATTCTAT CTTTTTTATT TTTTATTTTT TTGAGACAGG GTCTCGCTCT GTCACTCAGG 001280 001281 CTGGAGTGCC ACAGCGCGAT CTCTGCTCAC TACAACCTCC ATCTCCCAGG CTCAAGCACT CCTCCCACCT CAGCCTCCTG 001360 001361 AGTAGCTGGG ACCACAGGCA CAGAAACCCC ACTGTAAATA AAGAGAGGTA GGCTTTTAAA AATGTCACTC TGTTCACAGT 001440 001441 AAGGCAAGCA AGGGAAGCAA AATCAATTTC TTTCTAGAGG TGGGATAATG GGTAGGGAGT GGAAGACTTT AGGAAAGAGG 001520 001521 TGCCCCAGTT TCTGAGTCAC TTCATGGCTT CAATATTCAT TGACTATCAA TCAACAGATG AATGGATATA CAAAAGGTGG 001600 001601 TATCTCTGTT GCAGCAGGTA GTTAGTCAGA GCTGAGCAGG GAAGGAGAGG CTCCTCCGCC CCATCAGGAG ATGATCAGGC 001680 001681 AGTTGTTAAA CTGTCTCTCT CAAATAATCA TTGGTTGCAG CCGATGCCAG GGAAAGACAG TCTCCCAGTA GATAGAAACG 001760 001761 CCAGAAACTG GTGATCAGCA GCTTCCCAGT AAGATCTCAG GAGGTGGGTG AGTGGGCTTA AGCATGTGCA TGAAGAGGCA 001840 001841 AAATGGTTGA GCTTAGCTGG TACATGACCT TCCTCTAGGA ACACTCAACT GATAAGGGAA GAACACCTCA AGTGAGCACA 001920 001921 CATATAGCTT CAGTAAACAC ACTCACATGC AGCCCCTCCC AAGTGCTGGC AGGCCATTGT ACATGCAGAC TGCCAACATA 002000 002001 TAAAACCACA AGTCAAAGGT CAAACCATGC ACTTGAATCT CTCAAGGTCC CTACTGGCCC TCTTCCACGT GTACTTTATT 002080 002081 TCCTTGCATT CCTGTTCTAA AACTTTTTTT TTTTTTTTTT TGAGACGGAG TTTCGCTCTT GTTGCTCAGG CTGGAGTGCA 002160 002161 ATGGCGCGAT CTCAGCTCAC AGCAACCTCC ACCTCCCAGG TTCAAGCCAT TCTCCTGCCT CAGCCTCCCG AGTAGCTGGG 002240 002241 ATTATAGGCA TGTGCCATCA TGCCCGGCTA ATTTTATATT TTTAGTAGAG ACAGGGTTTC TCCATGTTGG TCAGGCTGGT 002320 002321 CTCGAACTCC GGACCTCAGG TGTTCTGCCC ACCTCCCAAA GTGCTGGGAT TACAGGCGTG AGCCACCATG CCCAGCTAAA 002400 002401 ACTTTTTAAT AAACTTTCAC TCCTGCTGTG AAACTTGCCT TGGTTTCTTA CTCTGTCTTA TGCCCCTTGG TTGAATTCTC 002480 002481 TCTTCTGAGG AGGCAAGGAT TCAGGTTGCT GCAGGCCCGT ATGGATTCAC TGCTACTAAC ATCTCCATAC AACAGAATAT 002560 002561 AATTTGGCCA TAAAATGAAA TGAAGTATTG ATACAAGCTA CAATGTAGAT GAACCTTGAG AACATTGCGT TAAGTGAAAG 002640 002641 AAGCCAGTCA CAACATATAT TGCTTGCTTC TGTTAACATG AAATGTCTGG AATAGGCAAA ACCATAGAGA CAGAAAGTAG 002720 002721 ATTCATGATT GCTGGGGGTT GGAGGGGGTG GGGAAATTGT GAGTGTGTCT TAGCCTGTTT TCTGTTGCAT ATATACCACA 002800 002801 GACTGGGTAG GGTAATTTAT AAAGAAAAAA AGTATATTTA GTACATGGTT CTGGAGACTG AGAAGTCCAA GAGCATGGAA 002880 002881 CAAGCATCTG GTGAGGACCT TCTTGCTGTA TCATAACATA ACAGAGGGCA TCACATGGCA AGAGGACAAG AGCAAGAGAG 002960 002961 CCAGAGAGCG CTTGCTTTTA TAACAAAACC ACTCCCACGA TGGCAACACT AATCCATTCT TGAGGGTAGA GGGACTGAGT 003040 003041 TTCCAACACA TGAACTTTTG GAGGACACAT TCAAACCATA GCAAGGTGAT AGCTAAAGGG TATGGGGTGT CTTTCTGGAG 003120 003121 TGATGAAAAT CTAAAATTGA TGGTAGTTAT GGTTGTACAA CCTTGTGACT ATGCTAAAAG CCATTGAATT GTAGACTTTA 003200 003201 ACTGAGAGAG TTCTATGGGA TGAATTATAT CTCAATAAAG C |