Difference between revisions of "ENST00000417058.2"
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sequence = <dnaseq>ATAGCATTAGGAGATATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACCTATGTAACAAACCTGCACATTGTGTACATGTACCCTAGAACTTAAAGTATAATTAAAAAACAAAACAAAACAAAACAAAAACAATGAGGTGCTATTGTTTTAGTGGTGAGTATCCGGAGACCTGGGAGTTCTATTTACCAGGTATAACCTGGGCTCAAAATTCCAGGCTGACTTCAGGCATGTCCTCATCTCATAGATGCCAGCACTAAGGCCCAGAGAGGGCCGAGCTCATTCAGCCCACCCATCTTCTCACCCCTGACTGCATTTCCCGGGGGTCCTTCTGCAGCCAGGTGCTGCTGTGGTACTTTGGGATCTATTGGCTGAGCTCCCAGAGAAGGGTCATGGATTGGGCTAGTTTGGAACAAGTGAAGGGACTGAAGATGGGCTCAGTATGGGGCGAAGACCTTCAGGAAGGGTCTGCAGAGTGAGTAGGGGGGTTTTGACTAGGAAAAGTTCCAACCCTGCCGGGGCCGCTGTCAAGAGAAAAGCATCTATTACAGTTACATTTTTAAGTTAAGTAGACTGAAGAATATTTCTTGTGTATTAAAGACGTTCCTTTTTGGTTGATTTGCAATGGAAAAGCTTTTGTTTTCTTTTTTTTTTTGGAAACAGGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCTAATTCAGTAGTCTCTGCTTTTTTTTTTTATTTTGTACCCCATCAATAAAATGATTTTCAGCATGTATCCCCAAATAAACAA</dnaseq>| | sequence = <dnaseq>ATAGCATTAGGAGATATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACCTATGTAACAAACCTGCACATTGTGTACATGTACCCTAGAACTTAAAGTATAATTAAAAAACAAAACAAAACAAAACAAAAACAATGAGGTGCTATTGTTTTAGTGGTGAGTATCCGGAGACCTGGGAGTTCTATTTACCAGGTATAACCTGGGCTCAAAATTCCAGGCTGACTTCAGGCATGTCCTCATCTCATAGATGCCAGCACTAAGGCCCAGAGAGGGCCGAGCTCATTCAGCCCACCCATCTTCTCACCCCTGACTGCATTTCCCGGGGGTCCTTCTGCAGCCAGGTGCTGCTGTGGTACTTTGGGATCTATTGGCTGAGCTCCCAGAGAAGGGTCATGGATTGGGCTAGTTTGGAACAAGTGAAGGGACTGAAGATGGGCTCAGTATGGGGCGAAGACCTTCAGGAAGGGTCTGCAGAGTGAGTAGGGGGGTTTTGACTAGGAAAAGTTCCAACCCTGCCGGGGCCGCTGTCAAGAGAAAAGCATCTATTACAGTTACATTTTTAAGTTAAGTAGACTGAAGAATATTTCTTGTGTATTAAAGACGTTCCTTTTTGGTTGATTTGCAATGGAAAAGCTTTTGTTTTCTTTTTTTTTTTGGAAACAGGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCTAATTCAGTAGTCTCTGCTTTTTTTTTTTATTTTGTACCCCATCAATAAAATGATTTTCAGCATGTATCCCCAAATAAACAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000215039.2]][[Category:lnc-VAMP1-1]] | + | [[Category:Intergenic]][[Category:ENSG00000215039.2]][[Category:lnc-VAMP1-1]][[Category:Transcripts]] |
Revision as of 11:44, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000417058.2 |
Source |
Gencode19 |
Same with |
lnc-VAMP1-1:9 |
Classification |
intergenic |
Length |
1504 nt |
Genomic location |
chr12-:6548324..6556939 |
Exon number |
3 |
Exons |
6548324..6548842,6552712..6552883,6556127..6556939 |
Genome context |
|
Sequence |
000001 ATAGCATTAG GAGATATACC TAATGTAAAT GATGAGTTAA TGGGTGCAGC ACACCAACAT GGCACATGTA TACCTATGTA 000080
000081 ACAAACCTGC ACATTGTGTA CATGTACCCT AGAACTTAAA GTATAATTAA AAAACAAAAC AAAACAAAAC AAAAACAATG 000160 000161 AGGTGCTATT GTTTTAGTGG TGAGTATCCG GAGACCTGGG AGTTCTATTT ACCAGGTATA ACCTGGGCTC AAAATTCCAG 000240 000241 GCTGACTTCA GGCATGTCCT CATCTCATAG ATGCCAGCAC TAAGGCCCAG AGAGGGCCGA GCTCATTCAG CCCACCCATC 000320 000321 TTCTCACCCC TGACTGCATT TCCCGGGGGT CCTTCTGCAG CCAGGTGCTG CTGTGGTACT TTGGGATCTA TTGGCTGAGC 000400 000401 TCCCAGAGAA GGGTCATGGA TTGGGCTAGT TTGGAACAAG TGAAGGGACT GAAGATGGGC TCAGTATGGG GCGAAGACCT 000480 000481 TCAGGAAGGG TCTGCAGAGT GAGTAGGGGG GTTTTGACTA GGAAAAGTTC CAACCCTGCC GGGGCCGCTG TCAAGAGAAA 000560 000561 AGCATCTATT ACAGTTACAT TTTTAAGTTA AGTAGACTGA AGAATATTTC TTGTGTATTA AAGACGTTCC TTTTTGGTTG 000640 000641 ATTTGCAATG GAAAAGCTTT TGTTTTCTTT TTTTTTTTGG AAACAGGGTC TCACTCTGCT CACTCTGTCT CCCAAGCTGG 000720 000721 AGTGCAGTGG TACAGTCACG GCTCACTGCA GCCTCCACTT CCTGGACTCA AGTGATCTTC TCACTTCAGC CTTCTGAGTA 000800 000801 GCTGGGACTA CAGCCCCCTC TGCAGCTCTT CATGGGGGTC CACTCAAGTC AGAAGCCACA TTTGGGTGTG ATTCAGAGAG 000880 000881 CTGTTTATGC AAAACCAGCT TTGTCACCAT CAGGCAAGGC ACCTGAATTC CCACCGCAGA GAGTGTTGTG GCCGTGAGGA 000960 000961 CTTTTCTGTC ACCAGCCATT TCCAGGTAGA CCCAGTGTAA TCACAAGCAT CCTTGTAAGT GGCAAAGAGG CAGAGGAGAC 001040 001041 AGCGCCAGAG AGGCAGCTGC ATGAGAAGGA TCAAGATGTT GCTGACTTTG AAGTTGGAAG AAGAAGGCCA TGAGCCTCAG 001120 001121 TATGTGGGCG GCTTCTAGAA GCTGGAAGGG GCAAGGAGAT GGATTTGACC CTTCAGCCTC CAGGGGCAGC TGTACCTGCC 001200 001201 ATCACTGATT GTAGCCTGGT GAGGCCTGTT TTAGACTTCT GACCTGTAGA GCTGTAACAT AATACATTTG GGTTGTTTTC 001280 001281 AACCACTAAG TTTGTGGTAA TTTGTTGTAG CAGCTGTAGA AAATGAATAC ATATGAATCC TCTGGCATTT GTTTGAGATT 001360 001361 TGCTCTATGG CCTAGTATGT GGTTGTAAAT GTTCCATCTG TGCCTGAAAA AATGTATATT TCTAATTCAG TAGTCTCTGC 001440 001441 TTTTTTTTTT TATTTTGTAC CCCATCAATA AAATGATTTT CAGCATGTAT CCCCAAATAA ACAA |