Difference between revisions of "ENST00000544645.1"

Revision as of 12:56, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000544645.1
Source	Gencode19
Same with	lnc-TMEM132C-2:1
Classification	intergenic
Length	1930 nt
Genomic location	chr12+:128399917..128436055
Exon number	3
Exons	128399917..128400227,128429263..128429344,128434519..128436055
Genome context
Sequence	000001 GATGACTTGT CTAGATCTTA GGCAACAATT CTCTTAGCAC ATCAGCTCCT GGAAACAAAT GCACTTAACC AGAAAAACAG 000080 000081 GGACATCAAC CAGCAAAGAT GCATCCTCAT TTAATAGAGC TTGAAATTAC TATAATCTGT AAAGTACAGC GAGAAGAAGA 000160 000161 AGTTTCACCT GCCTGCACAT CTGTCGTTGA CTCTCCATCT GACTTGGAGG GACTCTGAGG GACCAACCTG AGCCTGAGAA 000240 000241 GAGGCAAGAT TCCCCTTCAA GGACACACTG GGAACTTACG GACCTCTTTC TCCATGGTGC AGAGCGCAGA GGTGAACAAA 000320 000321 CAGACGCATA ATAGCTCTTG AGCTTGCCAT TGGGAAGTGA AAATCAACTG CTTGAATAAA TGTAAGGACT CAGGTAGACA 000400 000401 TCACCTTGTG ACTCAACAGC AGCCAATAAG ATGGAAATAA AGGCCATGAA GTTATCGGAT GGCATCTACA AGGAATACTT 000480 000481 AGATGAGGAG GTGACTCTGG TAGCAATTGT TCTTTTGTCT TTCTCACCTT CCTTCTTGTC CTGTCTGGGA TGCTGAAGTG 000560 000561 ATGGCTGGTA TACAGATGCC CTGTTGTGAT GTTGAGATAA ACATGAGAAT AAAAGTCGGC GATTACAGAT GGCAGAGAAG 000640 000641 AGAGAGAAAG ATAGGATGTA GGTGGATATT GACGGAACTA AGTTTCTATT GCACAAGTTC TACCACCAAC CTCTGGACTT 000720 000721 CATGATATGT GAGGGAGAAA TAAACTCCTA TTTTAGAAGA GATCTATGTT ACCTGCAACT GAACGGAATG CTTAATTGGC 000800 000801 ACATCCTATG TGCTCCAAAC CTTCCTTAAT TTCTGTGTGT AAGGCATACT TAGTCTTTAC CCATTATTCT GTTCACATTC 000880 000881 ATTCACTTGA TCAGCCTCCC AACTCTATGG TAAAGAGTTT ACTACAGTTT ACTCTATTAG TAAGGGAGAT TCTGGAGCAA 000960 000961 GCCCCACAAA TCATAGATTG AATACCCATT CATTAAGAGA GAGATTTAAA GATACTTCTA TCCAAACACA TTTTAAATTT 001040 001041 CCAGCACCTT TGAGGTGGTG GAGGTTCATG GTGGTTGATA GGGTTTAAAT GACTTGTGAT TCAAGCTCCA TATTACAATG 001120 001121 TAACAGTGCA AAAGTTCATT TTTTTAAATT TATTTTACTT TAAGTTCTGG TATACATGTG TAGAACATGC GGGTTTGTTA 001200 001201 CATAGGTATA CATGTGCCAT GGTGGTTTGC TGCACCTATC AAACCGTCAC CTAGGTTTTA AGAACCACAT GCATTAGGTA 001280 001281 TTTGACCTAA TGCTCTCCCT CATGTTGCCC CCCAACTCCC TGACAGGGCC CAGTGTGTGA TGTTCCCCTC CCTGTGTCCA 001360 001361 TGTGTTCTCA TTGTTCAACT CCCACTTATG AGTGAGAACA TGTGGTGTTT GATTTTCTGT TCCTGTGTTA GTTTGCTGAG 001440 001441 AATGATGGCT TCCAGCTTCA TCCATGTCCC TGCAAAGGAC ACGAACTCAT TCTTTTTTAT GGCTTCATAA TATTCCATGA 001520 001521 GTCTGGATTT GGTTACAGAT AGAGCTGGAC AAGCCTTAGC TATATCTAAT GGCTTTTGAC ATGTTATATC AATTTCTTAC 001600 001601 TGCTTTTGTA AATGAATATA TTAAGAAGAA AAAATTACAA ATGACCCTTT CTTCACAAAC TTTTAGGGTA ATCAAGTTCA 001680 001681 GTTATTAAAA AATGGATGTT TGCAACATTC ATAGTAATTA TTTTCAGAAA ATTAAAAATG ATTAAAAATT ATATTTTCAT 001760 001761 CCCATTCAGA TATTATATAT TTAACTGTGA GATAATTCTC AGAGATAAAT GTCAACTTTT AAAAAATGCT AAATAAATTA 001840 001841 AATCAAAATA TCCCCTCTAA AATAAATAAA TTAGCTCCGA TTATTTCTTC TTTTTAAATT TTTCCTTATA GTTGTAAAAA 001920 001921 TAAAGTGAAC

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@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GATGACTTGTCTAGATCTTAGGCAACAATTCTCTTAGCACATCAGCTCCTGGAAACAAATGCACTTAACCAGAAAAACAGGGACATCAACCAGCAAAGATGCATCCTCATTTAATAGAGCTTGAAATTACTATAATCTGTAAAGTACAGCGAGAAGAAGAAGTTTCACCTGCCTGCACATCTGTCGTTGACTCTCCATCTGACTTGGAGGGACTCTGAGGGACCAACCTGAGCCTGAGAAGAGGCAAGATTCCCCTTCAAGGACACACTGGGAACTTACGGACCTCTTTCTCCATGGTGCAGAGCGCAGAGGTGAACAAACAGACGCATAATAGCTCTTGAGCTTGCCATTGGGAAGTGAAAATCAACTGCTTGAATAAATGTAAGGACTCAGGTAGACATCACCTTGTGACTCAACAGCAGCCAATAAGATGGAAATAAAGGCCATGAAGTTATCGGATGGCATCTACAAGGAATACTTAGATGAGGAGGTGACTCTGGTAGCAATTGTTCTTTTGTCTTTCTCACCTTCCTTCTTGTCCTGTCTGGGATGCTGAAGTGATGGCTGGTATACAGATGCCCTGTTGTGATGTTGAGATAAACATGAGAATAAAAGTCGGCGATTACAGATGGCAGAGAAGAGAGAGAAAGATAGGATGTAGGTGGATATTGACGGAACTAAGTTTCTATTGCACAAGTTCTACCACCAACCTCTGGACTTCATGATATGTGAGGGAGAAATAAACTCCTATTTTAGAAGAGATCTATGTTACCTGCAACTGAACGGAATGCTTAATTGGCACATCCTATGTGCTCCAAACCTTCCTTAATTTCTGTGTGTAAGGCATACTTAGTCTTTACCCATTATTCTGTTCACATTCATTCACTTGATCAGCCTCCCAACTCTATGGTAAAGAGTTTACTACAGTTTACTCTATTAGTAAGGGAGATTCTGGAGCAAGCCCCACAAATCATAGATTGAATACCCATTCATTAAGAGAGAGATTTAAAGATACTTCTATCCAAACACATTTTAAATTTCCAGCACCTTTGAGGTGGTGGAGGTTCATGGTGGTTGATAGGGTTTAAATGACTTGTGATTCAAGCTCCATATTACAATGTAACAGTGCAAAAGTTCATTTTTTTAAATTTATTTTACTTTAAGTTCTGGTATACATGTGTAGAACATGCGGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCTATCAAACCGTCACCTAGGTTTTAAGAACCACATGCATTAGGTATTTGACCTAATGCTCTCCCTCATGTTGCCCCCCAACTCCCTGACAGGGCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGAACATGTGGTGTTTGATTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTCATTCTTTTTTATGGCTTCATAATATTCCATGAGTCTGGATTTGGTTACAGATAGAGCTGGACAAGCCTTAGCTATATCTAATGGCTTTTGACATGTTATATCAATTTCTTACTGCTTTTGTAAATGAATATATTAAGAAGAAAAAATTACAAATGACCCTTTCTTCACAAACTTTTAGGGTAATCAAGTTCAGTTATTAAAAAATGGATGTTTGCAACATTCATAGTAATTATTTTCAGAAAATTAAAAATGATTAAAAATTATATTTTCATCCCATTCAGATATTATATATTTAACTGTGAGATAATTCTCAGAGATAAATGTCAACTTTTAAAAAATGCTAAATAAATTAAATCAAAATATCCCCTCTAAAATAAATAAATTAGCTCCGATTATTTCTTCTTTTTAAATTTTTCCTTATAGTTGTAAAAATAAAGTGAAC</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:ENSG00000256193.1]]
+[[Category:Intergenic]][[Category:ENSG00000256193.1]][[Category:lnc-TMEM132C-2]]