Difference between revisions of "NONHSAT071780"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ctcaggctattcaagagactttagtaaagggacaattttcagagatgtgggcagaattaaggaatgcaatagggatggtgaggtgctcaggggagggcaacagcagaagccaatctcatttctaggtctgaaggggtaaggggagtggacacaggacaaaagccaggagagatccggagcttggagaagaaatgaagccaccgcgtgggagctctgcccagtgcaggatgtcgcaggagcccctctccctccttctgcccctttatctctgccgtgccttccattgggtgaattcaaccaggccccaggggcaacggagcagcaaggtcagcttcctggggcccagggcagggcagaggagggcagagtagatggggaaactgaCAGTGGGAAAGCAGGGCAAAGCCACAACACTGGGCACCATGCTAACAGCATCAAATGAGGAACACACTGTCCAC</dnaseq>| | sequence = <dnaseq>ctcaggctattcaagagactttagtaaagggacaattttcagagatgtgggcagaattaaggaatgcaatagggatggtgaggtgctcaggggagggcaacagcagaagccaatctcatttctaggtctgaaggggtaaggggagtggacacaggacaaaagccaggagagatccggagcttggagaagaaatgaagccaccgcgtgggagctctgcccagtgcaggatgtcgcaggagcccctctccctccttctgcccctttatctctgccgtgccttccattgggtgaattcaaccaggccccaggggcaacggagcagcaaggtcagcttcctggggcccagggcagggcagaggagggcagagtagatggggaaactgaCAGTGGGAAAGCAGGGCAAAGCCACAACACTGGGCACCATGCTAACAGCATCAAATGAGGAACACACTGTCCAC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG028245]] |
Revision as of 13:06, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT071780 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
458 nt |
| Genomic location |
chr2+:75217499..75217956 |
| Exon number |
1 |
| Exons |
75217499..75217956 |
| Genome context |
|
| Sequence |
000001 ctcaggctat tcaagagact ttagtaaagg gacaattttc agagatgtgg gcagaattaa ggaatgcaat agggatggtg 000080
000081 aggtgctcag gggagggcaa cagcagaagc caatctcatt tctaggtctg aaggggtaag gggagtggac acaggacaaa 000160 000161 agccaggaga gatccggagc ttggagaaga aatgaagcca ccgcgtggga gctctgccca gtgcaggatg tcgcaggagc 000240 000241 ccctctccct ccttctgccc ctttatctct gccgtgcctt ccattgggtg aattcaacca ggccccaggg gcaacggagc 000320 000321 agcaaggtca gcttcctggg gcccagggca gggcagagga gggcagagta gatggggaaa ctgaCAGTGG GAAAGCAGGG 000400 000401 CAAAGCCACA ACACTGGGCA CCATGCTAAC AGCATCAAAT GAGGAACACA CTGTCCAC |
Predicted Small Protein
| Name | NONHSAT071780_smProtein_191:370 |
| Length | 60 |
| Molecular weight | 6669.6654 |
| Aromaticity | 0.0677966101695 |
| Instability index | 53.8966101695 |
| Isoelectric point | 11.548034668 |
| Runs | 8 |
| Runs residual | 0.00886331830197 |
| Runs probability | 0.0354619325207 |
| Amino acid sequence | MKPPRGSSAQCRMSQEPLSLLLPLYLCRAFHWVNSTRPQGQRSSKVSFLGPRAGQRRAE |
| Secondary structure | LLLLLLLLLLLLLLLLLHHHHLLHHHHHHHHEELLLLLLLLEEEEEEEELLLLLLLLLL |
| PRMN | - |
| PiMo | - |
