Difference between revisions of "NONHSAT117163"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>CCGGGCTCTGAACTAGGGGAGTGTGGATTCTCAAAGAATTCATGAAAATGTTCACAATAGAGTCTTCTTATGCATCTGTTTTCCCTACAGCATTCAATTCAAGCACATGAAATATCAGAGAGGTTATGAAGCCTTCCTGAATGCTCATTCAAGgttgtacaagaagcatggcaccagcatctgcatctgatgaggacctcagggtgcttccacttgtggcagaagaaggggagctagcatgtgcagatgccacatggcgagagataaaggaaaggaaagaggaggaaggttccaggctctttttaacaatcggacctcacaggaactaatagtgtgagaaGATGTTTAACATATTCTAATAAGAAAGATATTCCTAATAAACTGCCGTGAGATAACTGCt</dnaseq>| | sequence = <dnaseq>CCGGGCTCTGAACTAGGGGAGTGTGGATTCTCAAAGAATTCATGAAAATGTTCACAATAGAGTCTTCTTATGCATCTGTTTTCCCTACAGCATTCAATTCAAGCACATGAAATATCAGAGAGGTTATGAAGCCTTCCTGAATGCTCATTCAAGgttgtacaagaagcatggcaccagcatctgcatctgatgaggacctcagggtgcttccacttgtggcagaagaaggggagctagcatgtgcagatgccacatggcgagagataaaggaaaggaaagaggaggaaggttccaggctctttttaacaatcggacctcacaggaactaatagtgtgagaaGATGTTTAACATATTCTAATAAGAAAGATATTCCTAATAAACTGCCGTGAGATAACTGCt</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG045986]] |
Revision as of 13:19, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT117163 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
400 nt |
| Genomic location |
chr6_dbb_hap3+:3967721..3968527 |
| Exon number |
3 |
| Exons |
3967721..3967838,3968097..3968131,3968281..3968527 |
| Genome context |
|
| Sequence |
000001 CCGGGCTCTG AACTAGGGGA GTGTGGATTC TCAAAGAATT CATGAAAATG TTCACAATAG AGTCTTCTTA TGCATCTGTT 000080
000081 TTCCCTACAG CATTCAATTC AAGCACATGA AATATCAGAG AGGTTATGAA GCCTTCCTGA ATGCTCATTC AAGgttgtac 000160 000161 aagaagcatg gcaccagcat ctgcatctga tgaggacctc agggtgcttc cacttgtggc agaagaaggg gagctagcat 000240 000241 gtgcagatgc cacatggcga gagataaagg aaaggaaaga ggaggaaggt tccaggctct ttttaacaat cggacctcac 000320 000321 aggaactaat agtgtgagaa GATGTTTAAC ATATTCTAAT AAGAAAGATA TTCCTAATAA ACTGCCGTGA GATAACTGCt 000400 |
Predicted Small Protein
| Name | NONHSAT117163_smProtein_140:328 |
| Length | 63 |
| Molecular weight | 6898.7499 |
| Aromaticity | 0.0322580645161 |
| Instability index | 64.3919354839 |
| Isoelectric point | 4.83966064453 |
| Runs | 7 |
| Runs residual | 0.0407373271889 |
| Runs probability | 0.045284780579 |
| Amino acid sequence | MLIQGCTRSMAPASASDEDLRVLPLVAEEGELACADATWREIKERKEEEGSRLFLTIGPH RN |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLHHHHHHHHHHHHLLLLEEEEELLL LL |
| PRMN | - |
| PiMo | - |
