Difference between revisions of "Lnc-SNURF-1:1"

From LncRNAWiki
Jump to: navigation, search
(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
Line 42: Line 42:
 
sequence = <dnaseq>GGAATTATCAGAGTAACAATAGTTCCTGTTACTGACTTGATATGGTCTCTGCCAGAATAGCTTCTCAGATTAATGGCCACTCTCAGGGGAAGCATTTCTCCTTGCATTGGTTTGCTGGTATGGATGGCCCTTAGATTTTGGCATGAGTGATTATGCAGCCTATTTGAAGAAAACCTGTTTTCAGGACCTTTTTAATTAAATATGGCCTGTTACATGAGTTAAAGTGTCATACGATACCATTTTTTGACCACTTAGTTGATGCCTCTGAAAGGAAGAGAGAATCAGATCGCTAAAATTTGATGTGTCGTCAGTGTGGATCCTACTCAGTAGTGTCACAACGAGGCTGAAAATCATATTAAGTGCTTTTAGGACAGAAACGTAAACTGCTCAGGTAAAATAACCTTATAAAGAGAAATAAGCATATATTGCAGAGGCCTTGGCTAGGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGTGTGCCTCACTAGACTTTTCGATTTCAAGATTTTCTGCAGAAAATGTTTTGAAAACTTTGAATACTTAAAAATGGCAGGTGTAGTATTGCACTTTGCTAGTTGCTCAGATACCCTTTTTTATTTGTATAGATATTCTGAGTTCCTTTTTTTTTCTACATGTTGTACGTTGTCGAAAGCTAAAAGGAAACTTATCCTTGGATCACGGAAGGCAGAGGCATTTGGTGAGATGGAAACAAGGATGTGTAAAAATGAGACGACCACCTCTCGGATTAAAAAAAAAAAGTGCCAGAGTTCTAGGGTTCTAAGTGATGTCCAGGAAGGAGGAGGAATAATATTTATGGAGCATATATTATGGAACACACCATTATGAATGGTTTTTGATTGATCTCACAAAGAGCATGTGCTTTAGACATTAATGCAGCGACTACCATGAAACAGAGTATTGGATTACCTAAGGAAAGAAGCAGAGGATGGAATTTGAGGCAATCAGGATGAGTGAAAAATTGATTTGCAGCTGACCTGCAAATGGAATCATCAGGAACATCCCTTTCTCATGGAGTCCCTTAATTTACAAGTTAACTGCAAACATAGGAGATGATAGTTCCAAGAAGGAACATTTTATCGTCTTTGTTTTTAATCTCAAGAATGGTACCTACCATCAGTGAATGACCTGTTGCAGTGCTTTCATTGAAGTGTTCTTCGTTCCCTCAGCAATATGATTGTGATGACTGAAAAAGGGAAACTGTGCCACTATTTGTACCATCATTTTCACCAAAATCTAAAAATGCTTTTTATGACGTATGGAGACATTCTTCATGTTTGTTTCAGTGGACACTCCTTGCAGATGTAAAAAACTGAGAAAACTCACTTTTGGAAAGTGACCTAAAGAGTGTCATTGAAGTGAATTTTAAGTAGGCACGATGATTGTTTTCATGGTTGCTGTTGGATCATATCTCAGGAGCTGGAATGACAGACATTATTGAACAAAGAAATCAGGATAGTGGAACTTAAAGGGCTTCATCTCAGTGCTTTCATAAGTATGAAGTGCATATATTTATAATTTTCACTAATCACAGGAATATTCCCTCTGTATACTTGCATTTTTTTCTATCAATTGACGCTTACAATTATTTTTGCAAGTTGGAAAAAAATGCAGTATTAATTTCATTTGCAACAAATTTAATAGATTAATTAGGAGAGAATAGATATCTTTAAAATTGAGTCTTCTGTCCAACTGCAAGTTATAGCTGAGGTGGTACCAGTTTAAGAAGTGAGAACTTCTTCACTGACTGAAATTTGCATATCAATCCAAATCATTGTGCTTATTTACTATTTTTGTAGACGTCATTCTTCAAAAGTGCTGCATCTTCAATAGTCAAGGAGGACAAAGACATCTTTCCTGCAGGTGGTGACCATGTGGATAATAGGATCATAGACAAATGGTGGTTCCATCTACAGCATCACCGAAATGCTGTTGTTACTGCTTCTTTCTGGGATCTTCTTGCATCTTTGCTTCTAAAGGGGCACACCTTTTATAGAAGTACGTCCAGGAATAGAAGTGACCTGCTTTTTCGCAAGTAATTGCCTGGAATGTTTTTATGTACTTCTCTGCACTCTCAATACATTTCATGCTTCCCTCTATTTTTGTATATTAACTCATTGTATTTCTTAAATTTATATTTTACTTTATGAATGGAAGTGAGATTTGTGTATGGTAAATATAATTAATTCAACCCCATGGATACGTTAGTCACTGTCCAGATGATGGCAAGTCTTTCTCAGAAGCAGAGGGCCTTGGTGTGCCAGTGATTTTTTTTCCCCATGTGTAAGATACTTTTTTTCCTCATTTGAATCAGGAGCCCACAGTTTTTAGACAAGTCCCAAATGAAATCTTAAGCATTTGTGTTATCTGGACTAGACCTTCTGTAGTATCCTTTTTGTTAGACCTAGTATATCTCATTGCAGATCAGGATCTGAGATTGACTATAGTTCACCTCTTTCCAAGTACACAAACTTGGATGACATGACAACTGAGTGTGTAAGGGAGAGCGAGACCCTTGCACTGCCATTTGAGCCCTTGTGATCTCATCTTGTAGAACATGTTGTACAATCATTTTATTGGTATCATTAGTGTTATTTGGGGCTGGAATAAAAATCTCAGTGCACCAAA</dnaseq>|
 
sequence = <dnaseq>GGAATTATCAGAGTAACAATAGTTCCTGTTACTGACTTGATATGGTCTCTGCCAGAATAGCTTCTCAGATTAATGGCCACTCTCAGGGGAAGCATTTCTCCTTGCATTGGTTTGCTGGTATGGATGGCCCTTAGATTTTGGCATGAGTGATTATGCAGCCTATTTGAAGAAAACCTGTTTTCAGGACCTTTTTAATTAAATATGGCCTGTTACATGAGTTAAAGTGTCATACGATACCATTTTTTGACCACTTAGTTGATGCCTCTGAAAGGAAGAGAGAATCAGATCGCTAAAATTTGATGTGTCGTCAGTGTGGATCCTACTCAGTAGTGTCACAACGAGGCTGAAAATCATATTAAGTGCTTTTAGGACAGAAACGTAAACTGCTCAGGTAAAATAACCTTATAAAGAGAAATAAGCATATATTGCAGAGGCCTTGGCTAGGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGTGTGCCTCACTAGACTTTTCGATTTCAAGATTTTCTGCAGAAAATGTTTTGAAAACTTTGAATACTTAAAAATGGCAGGTGTAGTATTGCACTTTGCTAGTTGCTCAGATACCCTTTTTTATTTGTATAGATATTCTGAGTTCCTTTTTTTTTCTACATGTTGTACGTTGTCGAAAGCTAAAAGGAAACTTATCCTTGGATCACGGAAGGCAGAGGCATTTGGTGAGATGGAAACAAGGATGTGTAAAAATGAGACGACCACCTCTCGGATTAAAAAAAAAAAGTGCCAGAGTTCTAGGGTTCTAAGTGATGTCCAGGAAGGAGGAGGAATAATATTTATGGAGCATATATTATGGAACACACCATTATGAATGGTTTTTGATTGATCTCACAAAGAGCATGTGCTTTAGACATTAATGCAGCGACTACCATGAAACAGAGTATTGGATTACCTAAGGAAAGAAGCAGAGGATGGAATTTGAGGCAATCAGGATGAGTGAAAAATTGATTTGCAGCTGACCTGCAAATGGAATCATCAGGAACATCCCTTTCTCATGGAGTCCCTTAATTTACAAGTTAACTGCAAACATAGGAGATGATAGTTCCAAGAAGGAACATTTTATCGTCTTTGTTTTTAATCTCAAGAATGGTACCTACCATCAGTGAATGACCTGTTGCAGTGCTTTCATTGAAGTGTTCTTCGTTCCCTCAGCAATATGATTGTGATGACTGAAAAAGGGAAACTGTGCCACTATTTGTACCATCATTTTCACCAAAATCTAAAAATGCTTTTTATGACGTATGGAGACATTCTTCATGTTTGTTTCAGTGGACACTCCTTGCAGATGTAAAAAACTGAGAAAACTCACTTTTGGAAAGTGACCTAAAGAGTGTCATTGAAGTGAATTTTAAGTAGGCACGATGATTGTTTTCATGGTTGCTGTTGGATCATATCTCAGGAGCTGGAATGACAGACATTATTGAACAAAGAAATCAGGATAGTGGAACTTAAAGGGCTTCATCTCAGTGCTTTCATAAGTATGAAGTGCATATATTTATAATTTTCACTAATCACAGGAATATTCCCTCTGTATACTTGCATTTTTTTCTATCAATTGACGCTTACAATTATTTTTGCAAGTTGGAAAAAAATGCAGTATTAATTTCATTTGCAACAAATTTAATAGATTAATTAGGAGAGAATAGATATCTTTAAAATTGAGTCTTCTGTCCAACTGCAAGTTATAGCTGAGGTGGTACCAGTTTAAGAAGTGAGAACTTCTTCACTGACTGAAATTTGCATATCAATCCAAATCATTGTGCTTATTTACTATTTTTGTAGACGTCATTCTTCAAAAGTGCTGCATCTTCAATAGTCAAGGAGGACAAAGACATCTTTCCTGCAGGTGGTGACCATGTGGATAATAGGATCATAGACAAATGGTGGTTCCATCTACAGCATCACCGAAATGCTGTTGTTACTGCTTCTTTCTGGGATCTTCTTGCATCTTTGCTTCTAAAGGGGCACACCTTTTATAGAAGTACGTCCAGGAATAGAAGTGACCTGCTTTTTCGCAAGTAATTGCCTGGAATGTTTTTATGTACTTCTCTGCACTCTCAATACATTTCATGCTTCCCTCTATTTTTGTATATTAACTCATTGTATTTCTTAAATTTATATTTTACTTTATGAATGGAAGTGAGATTTGTGTATGGTAAATATAATTAATTCAACCCCATGGATACGTTAGTCACTGTCCAGATGATGGCAAGTCTTTCTCAGAAGCAGAGGGCCTTGGTGTGCCAGTGATTTTTTTTCCCCATGTGTAAGATACTTTTTTTCCTCATTTGAATCAGGAGCCCACAGTTTTTAGACAAGTCCCAAATGAAATCTTAAGCATTTGTGTTATCTGGACTAGACCTTCTGTAGTATCCTTTTTGTTAGACCTAGTATATCTCATTGCAGATCAGGATCTGAGATTGACTATAGTTCACCTCTTTCCAAGTACACAAACTTGGATGACATGACAACTGAGTGTGTAAGGGAGAGCGAGACCCTTGCACTGCCATTTGAGCCCTTGTGATCTCATCTTGTAGAACATGTTGTACAATCATTTTATTGGTATCATTAGTGTTATTTGGGGCTGGAATAAAAATCTCAGTGCACCAAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-SNURF-1]]

Revision as of 13:26, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

lnc-SNURF-1:1

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

2696 nt

Genomic location

chr15+:25224704..25266501

Exon number

11

Exons

25224704..25224789,25225094..25225231,25226922..25227584,25243513..25243633,25244117..25244225,25245392..25245521,25246505..25246860,25247872..25248035,25264174..25264295,25264975..25265016,25265737..25266501

Genome context

Sequence
000001 GGAATTATCA GAGTAACAAT AGTTCCTGTT ACTGACTTGA TATGGTCTCT GCCAGAATAG CTTCTCAGAT TAATGGCCAC 000080
000081 TCTCAGGGGA AGCATTTCTC CTTGCATTGG TTTGCTGGTA TGGATGGCCC TTAGATTTTG GCATGAGTGA TTATGCAGCC 000160
000161 TATTTGAAGA AAACCTGTTT TCAGGACCTT TTTAATTAAA TATGGCCTGT TACATGAGTT AAAGTGTCAT ACGATACCAT 000240
000241 TTTTTGACCA CTTAGTTGAT GCCTCTGAAA GGAAGAGAGA ATCAGATCGC TAAAATTTGA TGTGTCGTCA GTGTGGATCC 000320
000321 TACTCAGTAG TGTCACAACG AGGCTGAAAA TCATATTAAG TGCTTTTAGG ACAGAAACGT AAACTGCTCA GGTAAAATAA 000400
000401 CCTTATAAAG AGAAATAAGC ATATATTGCA GAGGCCTTGG CTAGGTTCAT GATGACACAG GACCTTGTCT GAACATAATG 000480
000481 ATTTCAAAAT TTGAGCTTAA AAATGACACT CTGAAATCCA GTCAGTGTGC CTCACTAGAC TTTTCGATTT CAAGATTTTC 000560
000561 TGCAGAAAAT GTTTTGAAAA CTTTGAATAC TTAAAAATGG CAGGTGTAGT ATTGCACTTT GCTAGTTGCT CAGATACCCT 000640
000641 TTTTTATTTG TATAGATATT CTGAGTTCCT TTTTTTTTCT ACATGTTGTA CGTTGTCGAA AGCTAAAAGG AAACTTATCC 000720
000721 TTGGATCACG GAAGGCAGAG GCATTTGGTG AGATGGAAAC AAGGATGTGT AAAAATGAGA CGACCACCTC TCGGATTAAA 000800
000801 AAAAAAAAGT GCCAGAGTTC TAGGGTTCTA AGTGATGTCC AGGAAGGAGG AGGAATAATA TTTATGGAGC ATATATTATG 000880
000881 GAACACACCA TTATGAATGG TTTTTGATTG ATCTCACAAA GAGCATGTGC TTTAGACATT AATGCAGCGA CTACCATGAA 000960
000961 ACAGAGTATT GGATTACCTA AGGAAAGAAG CAGAGGATGG AATTTGAGGC AATCAGGATG AGTGAAAAAT TGATTTGCAG 001040
001041 CTGACCTGCA AATGGAATCA TCAGGAACAT CCCTTTCTCA TGGAGTCCCT TAATTTACAA GTTAACTGCA AACATAGGAG 001120
001121 ATGATAGTTC CAAGAAGGAA CATTTTATCG TCTTTGTTTT TAATCTCAAG AATGGTACCT ACCATCAGTG AATGACCTGT 001200
001201 TGCAGTGCTT TCATTGAAGT GTTCTTCGTT CCCTCAGCAA TATGATTGTG ATGACTGAAA AAGGGAAACT GTGCCACTAT 001280
001281 TTGTACCATC ATTTTCACCA AAATCTAAAA ATGCTTTTTA TGACGTATGG AGACATTCTT CATGTTTGTT TCAGTGGACA 001360
001361 CTCCTTGCAG ATGTAAAAAA CTGAGAAAAC TCACTTTTGG AAAGTGACCT AAAGAGTGTC ATTGAAGTGA ATTTTAAGTA 001440
001441 GGCACGATGA TTGTTTTCAT GGTTGCTGTT GGATCATATC TCAGGAGCTG GAATGACAGA CATTATTGAA CAAAGAAATC 001520
001521 AGGATAGTGG AACTTAAAGG GCTTCATCTC AGTGCTTTCA TAAGTATGAA GTGCATATAT TTATAATTTT CACTAATCAC 001600
001601 AGGAATATTC CCTCTGTATA CTTGCATTTT TTTCTATCAA TTGACGCTTA CAATTATTTT TGCAAGTTGG AAAAAAATGC 001680
001681 AGTATTAATT TCATTTGCAA CAAATTTAAT AGATTAATTA GGAGAGAATA GATATCTTTA AAATTGAGTC TTCTGTCCAA 001760
001761 CTGCAAGTTA TAGCTGAGGT GGTACCAGTT TAAGAAGTGA GAACTTCTTC ACTGACTGAA ATTTGCATAT CAATCCAAAT 001840
001841 CATTGTGCTT ATTTACTATT TTTGTAGACG TCATTCTTCA AAAGTGCTGC ATCTTCAATA GTCAAGGAGG ACAAAGACAT 001920
001921 CTTTCCTGCA GGTGGTGACC ATGTGGATAA TAGGATCATA GACAAATGGT GGTTCCATCT ACAGCATCAC CGAAATGCTG 002000
002001 TTGTTACTGC TTCTTTCTGG GATCTTCTTG CATCTTTGCT TCTAAAGGGG CACACCTTTT ATAGAAGTAC GTCCAGGAAT 002080
002081 AGAAGTGACC TGCTTTTTCG CAAGTAATTG CCTGGAATGT TTTTATGTAC TTCTCTGCAC TCTCAATACA TTTCATGCTT 002160
002161 CCCTCTATTT TTGTATATTA ACTCATTGTA TTTCTTAAAT TTATATTTTA CTTTATGAAT GGAAGTGAGA TTTGTGTATG 002240
002241 GTAAATATAA TTAATTCAAC CCCATGGATA CGTTAGTCAC TGTCCAGATG ATGGCAAGTC TTTCTCAGAA GCAGAGGGCC 002320
002321 TTGGTGTGCC AGTGATTTTT TTTCCCCATG TGTAAGATAC TTTTTTTCCT CATTTGAATC AGGAGCCCAC AGTTTTTAGA 002400
002401 CAAGTCCCAA ATGAAATCTT AAGCATTTGT GTTATCTGGA CTAGACCTTC TGTAGTATCC TTTTTGTTAG ACCTAGTATA 002480
002481 TCTCATTGCA GATCAGGATC TGAGATTGAC TATAGTTCAC CTCTTTCCAA GTACACAAAC TTGGATGACA TGACAACTGA 002560
002561 GTGTGTAAGG GAGAGCGAGA CCCTTGCACT GCCATTTGAG CCCTTGTGAT CTCATCTTGT AGAACATGTT GTACAATCAT 002640
002641 TTTATTGGTA TCATTAGTGT TATTTGGGGC TGGAATAAAA ATCTCAGTGC ACCAAA
[back to top]