Difference between revisions of "NONHSAT117468"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CGTGGGTTGGACGGGGCCAGAGTGTGAGGCAGAGCTAGGGGGCTGCATCTCTGCACCCTGTGCCCATGGGGGGACCTGCTACCCCCAGCCCTCTGGCTACAACTGCACCTGCCCTACAGGCTACACAGGACCCACCTGTAGTGAGGAGATGACAGCTTGTCACTCAGGGCCATGTCTCAATGGCGGCTCCTGCAACCCTAGCCCTGGAGGCTACTACTGCACCTGCCCTCCAAGCCACACAGGGCCCCAGTGCCAAACCAGCACTGACTACTGTGTGTCTGCCCCGTGCTTCAATGGGGGTACCTGTGTGAACAGGCCTGGCACCTTCTCCTGCCTCTGTGCCATGGGCTTCCAGGGCCCGCGCTGTGAGGGAAAGCTCCGCCCCAGCTGTGCAGACAGACTCTGATGGACTTATGTGCCCAGAAGCCCTGCCCACGCAATTCCCACTGCCTCCAGACTGGGCCCTCCTTCCACTGCTTGTGCCTCCAGGGATGGACCGGGCCTCTCTGCAACCTTCCACTGTCCTCCTGCCAGAAGGCTGCACTGAGCCAAGGCATAGACGTC</dnaseq>| | sequence = <dnaseq>CGTGGGTTGGACGGGGCCAGAGTGTGAGGCAGAGCTAGGGGGCTGCATCTCTGCACCCTGTGCCCATGGGGGGACCTGCTACCCCCAGCCCTCTGGCTACAACTGCACCTGCCCTACAGGCTACACAGGACCCACCTGTAGTGAGGAGATGACAGCTTGTCACTCAGGGCCATGTCTCAATGGCGGCTCCTGCAACCCTAGCCCTGGAGGCTACTACTGCACCTGCCCTCCAAGCCACACAGGGCCCCAGTGCCAAACCAGCACTGACTACTGTGTGTCTGCCCCGTGCTTCAATGGGGGTACCTGTGTGAACAGGCCTGGCACCTTCTCCTGCCTCTGTGCCATGGGCTTCCAGGGCCCGCGCTGTGAGGGAAAGCTCCGCCCCAGCTGTGCAGACAGACTCTGATGGACTTATGTGCCCAGAAGCCCTGCCCACGCAATTCCCACTGCCTCCAGACTGGGCCCTCCTTCCACTGCTTGTGCCTCCAGGGATGGACCGGGCCTCTCTGCAACCTTCCACTGTCCTCCTGCCAGAAGGCTGCACTGAGCCAAGGCATAGACGTC</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG046142]] |
Revision as of 13:31, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT117468 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
564 nt |
| Genomic location |
chr6_mann_hap4-:3521529..3524841 |
| Exon number |
5 |
| Exons |
3521529..3521539,3523078..3523231,3523739..3523856,3524292..3524444,3524714..3524841 |
| Genome context |
|
| Sequence |
000001 CGTGGGTTGG ACGGGGCCAG AGTGTGAGGC AGAGCTAGGG GGCTGCATCT CTGCACCCTG TGCCCATGGG GGGACCTGCT 000080
000081 ACCCCCAGCC CTCTGGCTAC AACTGCACCT GCCCTACAGG CTACACAGGA CCCACCTGTA GTGAGGAGAT GACAGCTTGT 000160 000161 CACTCAGGGC CATGTCTCAA TGGCGGCTCC TGCAACCCTA GCCCTGGAGG CTACTACTGC ACCTGCCCTC CAAGCCACAC 000240 000241 AGGGCCCCAG TGCCAAACCA GCACTGACTA CTGTGTGTCT GCCCCGTGCT TCAATGGGGG TACCTGTGTG AACAGGCCTG 000320 000321 GCACCTTCTC CTGCCTCTGT GCCATGGGCT TCCAGGGCCC GCGCTGTGAG GGAAAGCTCC GCCCCAGCTG TGCAGACAGA 000400 000401 CTCTGATGGA CTTATGTGCC CAGAAGCCCT GCCCACGCAA TTCCCACTGC CTCCAGACTG GGCCCTCCTT CCACTGCTTG 000480 000481 TGCCTCCAGG GATGGACCGG GCCTCTCTGC AACCTTCCAC TGTCCTCCTG CCAGAAGGCT GCACTGAGCC AAGGCATAGA 000560 000561 CGTC |
Predicted Small Protein
| Name | NONHSAT117468_smProtein_179:310 |
| Length | 44 |
| Molecular weight | 4175.8903 |
| Aromaticity | 0.0 |
| Instability index | 59.7488372093 |
| Isoelectric point | 7.97601318359 |
| Runs | 7 |
| Runs residual | 0.0054873268879 |
| Runs probability | 0.0455245161128 |
| Amino acid sequence | MAAPATLALEATTAPALQATQGPSAKPALTTVCLPRASMGVPV |
| Secondary structure | LLLHHHHHHHHLLLHHHHHLLLLLLLLLLEEEELLLLLLLLLL |
| PRMN | - |
| PiMo | - |
