Difference between revisions of "Lnc-SLC10A5-1:1"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>CTTTCGTAAGCAATGACGCCAGCCACTTAGTCCATTGCAAAATAACTGATGGTCCTGGATATTTAATCATGTTAATGCAGTCTGTTTCTTAACTAAAGAAAAATGGGTGCCCTTTAAAGTTTTTTTTTTTTTTTAAAGATTAGGAAACAGGAAGTCAGAAGAAGCAAAATTAGACCTCCTAAGGTAGATGCCTAATGATTTACCATCAAAATTCAAAATTTTCCTTGTTTTATGAGAGGAATGAGCAGGAGCATTGTCTTAGTGGAGAAGCAATCTCTGGTGAAGCTTACCTGGGCATTTTTCTGCTAAAACTTTGGCTGTCTCTAAACATTCTCATATTTTTTTTTTCTTTTTGTAGAGATAGGTCTTGCTATGTTGCCCAGACTGGTCTTGAACTCCTGGCCTCAATGGATCCTCCTGCCTTGGCCACCAAAAGTGCTGAGACTACAGGCATAAGCCACTGTACCCAGCCTCATAACACCTTTATAATAAGCAGACGTTATTGTTCTTTGGCTCTCCAGAAAGTCAACAAGAAAAATGCTTTGAGCATCCCAAAAAATAGTTGCCATGACCTTGCTTTTGACTAGTCCACTTTTATTTTGACTGGACCACTTCCACCTCTTGGTAGCTATTGCTCTGTTTGTGCTTTGTTTTCGGGATTATTCTGGTAAAGCCATGTTTCATCTCCTGTTACAATTCTTGGAAGAAATCCTTCAGGATCTTGATCCCACTTGTTTAAAATTTTTATTGAAAGACAACTGAAATTTTAAGTAGAAAACCCACCAGGAGAACAAAAGTACTCTTGTCTGTAGCTGATCTGGGTGCAATAGTTTCGGTACCCATCAAGTGGAAAGTTTGCTCAAGTTTAATTTTTCTGTCAGCATTGTGTAAGCTGAACCAACTGAGACATCTATGATGTTGGATATTGTATTAGTCCATTCTCACACTGCTATAAAGAACTACATGAGGTCGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACCTGAGATCAGGAGTTCGAGACAAACCTGGCCAACATGGTGAAACCCCATATCTACTAAAAATACAAAAATTTGCTGGGCATGATGACAAACACCTGTAATCCCTGCTACTCACAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGCTTGCAGTGAACCGAGAGAGCACCACTGCATTCCAGTCTGGGTGACAAGAGTGAAACTCTGTCCTCCCAAAAAAGAATTACCTGAGAGTGCGTACTGTATAAAGAAAAGAAGCTTGACTCAGTTCCACAGGCTCTACAGGAAGCATGGCTGGGAGGCTCAGGAAACTTAAAATCATGGGAGAAGGGGAAGAAAGCACATCTTCACATGGCCAGCAGGAGACAGCAAGTGAAGAGGGAGGTGCTACACACTTTCAAACAACCAGATCTTGTGAGAACTCTATCATGGGACAGCACTAGGGCGATGGTGCTAAACCATCAGAAGCCATGCACATGATCCAATCATCTCCCTCCATGTCCCTCCTCCAACACTTCCTGTCATTACACTTCTGCATGAGATTTGGGTGGGGACACACAGCCAAACCTCACCATAAATTTGATGTGTGTTCTTCCTTCAATTTTAGCAGAATTTATGTTTCTCTGATAAAAGAGCTCTTTTCTAAATGTCTTATCATAGTTAGTGTCCCTCACTAGATCCTGTTCAGACATGTTACAAAAAGTTTATTCTGGTGCAAAAAAAAAATTGAAATTCATACACACTTTTTTATAATACATATTTTCCATGAAAATTTAGAAGAACACTTATATAGATGAATGATAGATTATCAAAGTTTTCCTAGATTTGTCAGGCTTTGTTCTTCACGGTTTTCAAATGAAAGGGCCTGGAGAAACCGAAGAACTAAAAGGGTTGCAGAAAGAGTCCTAAGGGGAAAGAAAAACTGATATACTCACATCTTCGACCTAGGCAACAAAAGTTATGAGTCAAGATATTTGGTCACATAACTAAAGATAACTTAGGTTTTATGACATTTTTGTTTTTTGTTTTGTTTTTGTCAGTTAAAATAGGGAAATTTTAACTGAAATATCAATGAACAGTCCCATTCCCTATCCTC</dnaseq>|
 
sequence = <dnaseq>CTTTCGTAAGCAATGACGCCAGCCACTTAGTCCATTGCAAAATAACTGATGGTCCTGGATATTTAATCATGTTAATGCAGTCTGTTTCTTAACTAAAGAAAAATGGGTGCCCTTTAAAGTTTTTTTTTTTTTTTAAAGATTAGGAAACAGGAAGTCAGAAGAAGCAAAATTAGACCTCCTAAGGTAGATGCCTAATGATTTACCATCAAAATTCAAAATTTTCCTTGTTTTATGAGAGGAATGAGCAGGAGCATTGTCTTAGTGGAGAAGCAATCTCTGGTGAAGCTTACCTGGGCATTTTTCTGCTAAAACTTTGGCTGTCTCTAAACATTCTCATATTTTTTTTTTCTTTTTGTAGAGATAGGTCTTGCTATGTTGCCCAGACTGGTCTTGAACTCCTGGCCTCAATGGATCCTCCTGCCTTGGCCACCAAAAGTGCTGAGACTACAGGCATAAGCCACTGTACCCAGCCTCATAACACCTTTATAATAAGCAGACGTTATTGTTCTTTGGCTCTCCAGAAAGTCAACAAGAAAAATGCTTTGAGCATCCCAAAAAATAGTTGCCATGACCTTGCTTTTGACTAGTCCACTTTTATTTTGACTGGACCACTTCCACCTCTTGGTAGCTATTGCTCTGTTTGTGCTTTGTTTTCGGGATTATTCTGGTAAAGCCATGTTTCATCTCCTGTTACAATTCTTGGAAGAAATCCTTCAGGATCTTGATCCCACTTGTTTAAAATTTTTATTGAAAGACAACTGAAATTTTAAGTAGAAAACCCACCAGGAGAACAAAAGTACTCTTGTCTGTAGCTGATCTGGGTGCAATAGTTTCGGTACCCATCAAGTGGAAAGTTTGCTCAAGTTTAATTTTTCTGTCAGCATTGTGTAAGCTGAACCAACTGAGACATCTATGATGTTGGATATTGTATTAGTCCATTCTCACACTGCTATAAAGAACTACATGAGGTCGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACCTGAGATCAGGAGTTCGAGACAAACCTGGCCAACATGGTGAAACCCCATATCTACTAAAAATACAAAAATTTGCTGGGCATGATGACAAACACCTGTAATCCCTGCTACTCACAAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGCTTGCAGTGAACCGAGAGAGCACCACTGCATTCCAGTCTGGGTGACAAGAGTGAAACTCTGTCCTCCCAAAAAAGAATTACCTGAGAGTGCGTACTGTATAAAGAAAAGAAGCTTGACTCAGTTCCACAGGCTCTACAGGAAGCATGGCTGGGAGGCTCAGGAAACTTAAAATCATGGGAGAAGGGGAAGAAAGCACATCTTCACATGGCCAGCAGGAGACAGCAAGTGAAGAGGGAGGTGCTACACACTTTCAAACAACCAGATCTTGTGAGAACTCTATCATGGGACAGCACTAGGGCGATGGTGCTAAACCATCAGAAGCCATGCACATGATCCAATCATCTCCCTCCATGTCCCTCCTCCAACACTTCCTGTCATTACACTTCTGCATGAGATTTGGGTGGGGACACACAGCCAAACCTCACCATAAATTTGATGTGTGTTCTTCCTTCAATTTTAGCAGAATTTATGTTTCTCTGATAAAAGAGCTCTTTTCTAAATGTCTTATCATAGTTAGTGTCCCTCACTAGATCCTGTTCAGACATGTTACAAAAAGTTTATTCTGGTGCAAAAAAAAAATTGAAATTCATACACACTTTTTTATAATACATATTTTCCATGAAAATTTAGAAGAACACTTATATAGATGAATGATAGATTATCAAAGTTTTCCTAGATTTGTCAGGCTTTGTTCTTCACGGTTTTCAAATGAAAGGGCCTGGAGAAACCGAAGAACTAAAAGGGTTGCAGAAAGAGTCCTAAGGGGAAAGAAAAACTGATATACTCACATCTTCGACCTAGGCAACAAAAGTTATGAGTCAAGATATTTGGTCACATAACTAAAGATAACTTAGGTTTTATGACATTTTTGTTTTTTGTTTTGTTTTTGTCAGTTAAAATAGGGAAATTTTAACTGAAATATCAATGAACAGTCCCATTCCCTATCCTC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-SLC10A5-1]]

Revision as of 13:37, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-SLC10A5-1:1

Source

LNCipedia2.1

Same with

NONHSAT127466

Classification

intergenic

Length

2135 nt

Genomic location

chr8-:82608603..82610929

Exon number

2

Exons

82608603..82609137,82609330..82610929

Genome context

Sequence
000001 CTTTCGTAAG CAATGACGCC AGCCACTTAG TCCATTGCAA AATAACTGAT GGTCCTGGAT ATTTAATCAT GTTAATGCAG 000080
000081 TCTGTTTCTT AACTAAAGAA AAATGGGTGC CCTTTAAAGT TTTTTTTTTT TTTTAAAGAT TAGGAAACAG GAAGTCAGAA 000160
000161 GAAGCAAAAT TAGACCTCCT AAGGTAGATG CCTAATGATT TACCATCAAA ATTCAAAATT TTCCTTGTTT TATGAGAGGA 000240
000241 ATGAGCAGGA GCATTGTCTT AGTGGAGAAG CAATCTCTGG TGAAGCTTAC CTGGGCATTT TTCTGCTAAA ACTTTGGCTG 000320
000321 TCTCTAAACA TTCTCATATT TTTTTTTTCT TTTTGTAGAG ATAGGTCTTG CTATGTTGCC CAGACTGGTC TTGAACTCCT 000400
000401 GGCCTCAATG GATCCTCCTG CCTTGGCCAC CAAAAGTGCT GAGACTACAG GCATAAGCCA CTGTACCCAG CCTCATAACA 000480
000481 CCTTTATAAT AAGCAGACGT TATTGTTCTT TGGCTCTCCA GAAAGTCAAC AAGAAAAATG CTTTGAGCAT CCCAAAAAAT 000560
000561 AGTTGCCATG ACCTTGCTTT TGACTAGTCC ACTTTTATTT TGACTGGACC ACTTCCACCT CTTGGTAGCT ATTGCTCTGT 000640
000641 TTGTGCTTTG TTTTCGGGAT TATTCTGGTA AAGCCATGTT TCATCTCCTG TTACAATTCT TGGAAGAAAT CCTTCAGGAT 000720
000721 CTTGATCCCA CTTGTTTAAA ATTTTTATTG AAAGACAACT GAAATTTTAA GTAGAAAACC CACCAGGAGA ACAAAAGTAC 000800
000801 TCTTGTCTGT AGCTGATCTG GGTGCAATAG TTTCGGTACC CATCAAGTGG AAAGTTTGCT CAAGTTTAAT TTTTCTGTCA 000880
000881 GCATTGTGTA AGCTGAACCA ACTGAGACAT CTATGATGTT GGATATTGTA TTAGTCCATT CTCACACTGC TATAAAGAAC 000960
000961 TACATGAGGT CGGGCGTGGT GGCTCACACC TGTAATCCCA GCACTTTGGG AGGCCAAGAC AGGTGGATCA CCTGAGATCA 001040
001041 GGAGTTCGAG ACAAACCTGG CCAACATGGT GAAACCCCAT ATCTACTAAA AATACAAAAA TTTGCTGGGC ATGATGACAA 001120
001121 ACACCTGTAA TCCCTGCTAC TCACAAGGCT GAGGCAGGAG AATCACTTGA ACCTGGGAGG CGGAGCTTGC AGTGAACCGA 001200
001201 GAGAGCACCA CTGCATTCCA GTCTGGGTGA CAAGAGTGAA ACTCTGTCCT CCCAAAAAAG AATTACCTGA GAGTGCGTAC 001280
001281 TGTATAAAGA AAAGAAGCTT GACTCAGTTC CACAGGCTCT ACAGGAAGCA TGGCTGGGAG GCTCAGGAAA CTTAAAATCA 001360
001361 TGGGAGAAGG GGAAGAAAGC ACATCTTCAC ATGGCCAGCA GGAGACAGCA AGTGAAGAGG GAGGTGCTAC ACACTTTCAA 001440
001441 ACAACCAGAT CTTGTGAGAA CTCTATCATG GGACAGCACT AGGGCGATGG TGCTAAACCA TCAGAAGCCA TGCACATGAT 001520
001521 CCAATCATCT CCCTCCATGT CCCTCCTCCA ACACTTCCTG TCATTACACT TCTGCATGAG ATTTGGGTGG GGACACACAG 001600
001601 CCAAACCTCA CCATAAATTT GATGTGTGTT CTTCCTTCAA TTTTAGCAGA ATTTATGTTT CTCTGATAAA AGAGCTCTTT 001680
001681 TCTAAATGTC TTATCATAGT TAGTGTCCCT CACTAGATCC TGTTCAGACA TGTTACAAAA AGTTTATTCT GGTGCAAAAA 001760
001761 AAAAATTGAA ATTCATACAC ACTTTTTTAT AATACATATT TTCCATGAAA ATTTAGAAGA ACACTTATAT AGATGAATGA 001840
001841 TAGATTATCA AAGTTTTCCT AGATTTGTCA GGCTTTGTTC TTCACGGTTT TCAAATGAAA GGGCCTGGAG AAACCGAAGA 001920
001921 ACTAAAAGGG TTGCAGAAAG AGTCCTAAGG GGAAAGAAAA ACTGATATAC TCACATCTTC GACCTAGGCA ACAAAAGTTA 002000
002001 TGAGTCAAGA TATTTGGTCA CATAACTAAA GATAACTTAG GTTTTATGAC ATTTTTGTTT TTTGTTTTGT TTTTGTCAGT 002080
002081 TAAAATAGGG AAATTTTAAC TGAAATATCA ATGAACAGTC CCATTCCCTA TCCTC
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