Difference between revisions of "NONHSAT095716"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AAGAGCAAAGATTTGACAATGCATAGAATTAACATTGGTTTGTGGGCCACCTTCTGGGCCAGCACCAAAGACTGAAAAAATATTTTGCCCCCTAAAAGTTGTTATTGAGTCTTGTCAAATCACATTGCTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATATATATATATAtttttttaatctgtagagatgggatctcactatcttgcccaggctggtctcgaactcttgggctcatgctgtcctacctcagacttccaagtagctgggttttctttgggctaattatttttttgtagagatggaggtctcgctgtgttgcccaggctggtctcaaattcctggactcaagcagtccatctgcctcagcctcccaaagtgatgggattacaggcgtgagctgctgtgcctggcAGAACAGTATGAAGTGTTAACGCCAAAATTTGTTTTAGCTATCATATATAAATCATAAGCATATTA</dnaseq>| | sequence = <dnaseq>AAGAGCAAAGATTTGACAATGCATAGAATTAACATTGGTTTGTGGGCCACCTTCTGGGCCAGCACCAAAGACTGAAAAAATATTTTGCCCCCTAAAAGTTGTTATTGAGTCTTGTCAAATCACATTGCTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATATATATATATAtttttttaatctgtagagatgggatctcactatcttgcccaggctggtctcgaactcttgggctcatgctgtcctacctcagacttccaagtagctgggttttctttgggctaattatttttttgtagagatggaggtctcgctgtgttgcccaggctggtctcaaattcctggactcaagcagtccatctgcctcagcctcccaaagtgatgggattacaggcgtgagctgctgtgcctggcAGAACAGTATGAAGTGTTAACGCCAAAATTTGTTTTAGCTATCATATATAAATCATAAGCATATTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG037585]] |
Revision as of 13:40, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT095716 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
606 nt |
| Genomic location |
chr4+:17632547..17634062 |
| Exon number |
2 |
| Exons |
17632547..17632998,17633909..17634062 |
| Genome context |
|
| Sequence |
000001 AAGAGCAAAG ATTTGACAAT GCATAGAATT AACATTGGTT TGTGGGCCAC CTTCTGGGCC AGCACCAAAG ACTGAAAAAA 000080
000081 TATTTTGCCC CCTAAAAGTT GTTATTGAGT CTTGTCAAAT CACATTGCTC TGTCAGAAGG TAAGACAAAT CAGTGTGGAC 000160 000161 TGAGAGCAAG GTCAGCACCG TGAACAGCCA TTGCGGTTCC TTTAACCCAC TGGGAATTCA TGCAGTGAAG AAGCAACACA 000240 000241 CCATGAGGCA AATGGCTCAA ACCCAAAGAC CAGAGGTTCA GGGGATATAT ATATATAttt ttttaatctg tagagatggg 000320 000321 atctcactat cttgcccagg ctggtctcga actcttgggc tcatgctgtc ctacctcaga cttccaagta gctgggtttt 000400 000401 ctttgggcta attatttttt tgtagagatg gaggtctcgc tgtgttgccc aggctggtct caaattcctg gactcaagca 000480 000481 gtccatctgc ctcagcctcc caaagtgatg ggattacagg cgtgagctgc tgtgcctggc AGAACAGTAT GAAGTGTTAA 000560 000561 CGCCAAAATT TGTTTTAGCT ATCATATATA AATCATAAGC ATATTA |
Predicted Small Protein
| Name | NONHSAT095716_smProtein_242:424 |
| Length | 61 |
| Molecular weight | 6987.3056 |
| Aromaticity | 0.15 |
| Instability index | 41.1983333333 |
| Isoelectric point | 9.38006591797 |
| Runs | 11 |
| Runs residual | 0.0335992907801 |
| Runs probability | 0.0482969600617 |
| Amino acid sequence | MRQMAQTQRPEVQGIYIYIFLICRDGISLSCPGWSRTLGLMLSYLRLPSSWVFFGLIIFL |
| Secondary structure | LLHHHHLLLLLLLEEEEEEEEEELLLEEEELLLHHHHHHHHHHHLLLLLLLLLLLEEEEL |
| PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHLL |
| PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTTTTToo |
