Difference between revisions of "Lnc-C9orf37-1:1"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>GTTGTTGTTGTTGTTGTTGTTGTTTTTGAGACACGGTCTCACTCCCGCCGCCCAGGCTAGTGTGCAGTGGCACGATCTCGGCTCACTGCAGCCTTAACCTCCTGTGTTCAAGCGATCCACCCATCTCAGCCCCGCAAGTAGCTAGGACTACAGGCACGTGCCACCACACCTGGGTTTTGTTTTTTGTTTTTTGTTTTTCTTATAGAGACAGGGTTTTGCCATGCTGTCCAGGCTGACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTCGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGACCGACATGGAGAAACCCCATCTCTACTAGAAATACGAAATTAGCTGGGCATGGTGGCACATGCCTGTAATCCCAGCTACCAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGAGCAACAAGAGTGAAACTCCATCTCAAAAAAAAAATACAAAAATTAGCCAGGCATGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGGATCACTTAAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACAAATGCACTTTAGCCTGGGTGACAGAGCGAGACTTCATCTCAAAAAGAAAAAAAAAAGAAAAATGCTGGAACCCACAGAGGATGCCGGAAAGGGGGCAGTGGTCCCCAGACTAACCCGTATGCCAGCCAAGCACCCTCAAGTGATCCCAGCTGGTGGCACAGAACTGAAGATTAACCCTGCCCTCACTGTCCAGATTCCTAACCCACAACGCTGTGAGATATAATAAAATGGTTGTGTTAACTGTTTTAAGAATGGTGTCTGACTTGAGGTGACCGCGACTTTTACGTAGCAGTAGGTAACTGGAACAGATGTCCAACCTCACTAGAAATTACAGAAAACCCGGCCGGGCGCAGTGGCTCAGCCTGTAATCCCAGCACTGTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGATCATCCTGGCTGACACGGTGAAACCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGTGGAGCTTGCAGGGAAAGCCCAAATGACCTACCATTTCAATCCATCAGATTGACAAATATTAAATGTCTCGACACAGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGGGGCCAAGGCGAGCGGATTGCTTGAGGCCAGAAGTGTGACAGCAGCCTAGGTAACACGGTGAAACCCCATCTCTACCAAAACTACCAAAGATTAGCTGGGTGTGGTGGCGCGTGCCCCTGGTCCCAGTCACTCAGGAGGCTGTGGTGGGAGCCCCGGAGGAAGGAGTTGCAGTGAGCCAAGATTGTACCACTGCACTCCAGTCTGGGTGACAAAGTGAGACCTCATCTCAAATAAAATCAATGTCTTGGGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTAAGAGGCTGAGGCGGGCGGATCACCTGAGGTTCGGAGTTCCAGGCCCGCCTGACCAACACGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGCCTGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGTCTGAGGCAGAAGAATCACTTGAACCAGGGAGGCAGAGGTTGCGGTGAGCAGCTGAGATTGCACCACTGCACTCCAGCCTGGGTAACAAGAGCAACGTAAATAAATAAATAAATAAATAAATGTCTCAACACACGTTGGAGGGAGGTGGAACACAAACACCCCTTATTCCAGTCAAACTGCAGACAAGTACGAGGTTCTGGCAAAGAGTGGGACAGGTCTACTGTAATTTTACCTGTGCATACCAGGAGACCCAGAATTCCGCTTAGAATCTCATGGTATTTAACCGGGAGCCTCACACGCCACTGCTCCTACTAGCAAAGCATCGCGAAAACCGTCATGGGACATTGACTCCACAAAAACAAACAGTATGCAACTGACCCTTGGGTCATCCTAAGGGTCCAGGTTCTGTGATCTTCCCAACGCCCATGCAGATGGCCCCGTTTTGCACATACACCAAGGCTCTTTGAGATGACTCTGCCAGAGTAAGCAGCCTCCAACCACTGTCCAAAGTGAAACCTGTCCCGAGCTGCCCCACACACTCCTCAGTAAGAACACGGGAGGCAAGGGGCTCCCGCACAGCTGCCAGCTGCTTCCCTGCCAAAACACCTGGAGCTGCTCCTCTGCCTCTCAGCAACTGCTTCAGGTCAGGCTGGGTGAATTTCCCAGGGAGCCCGTTTTCACTGGCCAGGCCAATGGCAGCGGCCATGTTTCTGCCTTTTCAAATCATCGAATCAGGCAGGACCACAGGATGCAGTTCTGCCCACGGAG</dnaseq>|
 
sequence = <dnaseq>GTTGTTGTTGTTGTTGTTGTTGTTTTTGAGACACGGTCTCACTCCCGCCGCCCAGGCTAGTGTGCAGTGGCACGATCTCGGCTCACTGCAGCCTTAACCTCCTGTGTTCAAGCGATCCACCCATCTCAGCCCCGCAAGTAGCTAGGACTACAGGCACGTGCCACCACACCTGGGTTTTGTTTTTTGTTTTTTGTTTTTCTTATAGAGACAGGGTTTTGCCATGCTGTCCAGGCTGACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTCGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGACCGACATGGAGAAACCCCATCTCTACTAGAAATACGAAATTAGCTGGGCATGGTGGCACATGCCTGTAATCCCAGCTACCAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGAGCAACAAGAGTGAAACTCCATCTCAAAAAAAAAATACAAAAATTAGCCAGGCATGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGGATCACTTAAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACAAATGCACTTTAGCCTGGGTGACAGAGCGAGACTTCATCTCAAAAAGAAAAAAAAAAGAAAAATGCTGGAACCCACAGAGGATGCCGGAAAGGGGGCAGTGGTCCCCAGACTAACCCGTATGCCAGCCAAGCACCCTCAAGTGATCCCAGCTGGTGGCACAGAACTGAAGATTAACCCTGCCCTCACTGTCCAGATTCCTAACCCACAACGCTGTGAGATATAATAAAATGGTTGTGTTAACTGTTTTAAGAATGGTGTCTGACTTGAGGTGACCGCGACTTTTACGTAGCAGTAGGTAACTGGAACAGATGTCCAACCTCACTAGAAATTACAGAAAACCCGGCCGGGCGCAGTGGCTCAGCCTGTAATCCCAGCACTGTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGATCATCCTGGCTGACACGGTGAAACCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGTGGAGCTTGCAGGGAAAGCCCAAATGACCTACCATTTCAATCCATCAGATTGACAAATATTAAATGTCTCGACACAGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGGGGCCAAGGCGAGCGGATTGCTTGAGGCCAGAAGTGTGACAGCAGCCTAGGTAACACGGTGAAACCCCATCTCTACCAAAACTACCAAAGATTAGCTGGGTGTGGTGGCGCGTGCCCCTGGTCCCAGTCACTCAGGAGGCTGTGGTGGGAGCCCCGGAGGAAGGAGTTGCAGTGAGCCAAGATTGTACCACTGCACTCCAGTCTGGGTGACAAAGTGAGACCTCATCTCAAATAAAATCAATGTCTTGGGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTAAGAGGCTGAGGCGGGCGGATCACCTGAGGTTCGGAGTTCCAGGCCCGCCTGACCAACACGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGCCTGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGTCTGAGGCAGAAGAATCACTTGAACCAGGGAGGCAGAGGTTGCGGTGAGCAGCTGAGATTGCACCACTGCACTCCAGCCTGGGTAACAAGAGCAACGTAAATAAATAAATAAATAAATAAATGTCTCAACACACGTTGGAGGGAGGTGGAACACAAACACCCCTTATTCCAGTCAAACTGCAGACAAGTACGAGGTTCTGGCAAAGAGTGGGACAGGTCTACTGTAATTTTACCTGTGCATACCAGGAGACCCAGAATTCCGCTTAGAATCTCATGGTATTTAACCGGGAGCCTCACACGCCACTGCTCCTACTAGCAAAGCATCGCGAAAACCGTCATGGGACATTGACTCCACAAAAACAAACAGTATGCAACTGACCCTTGGGTCATCCTAAGGGTCCAGGTTCTGTGATCTTCCCAACGCCCATGCAGATGGCCCCGTTTTGCACATACACCAAGGCTCTTTGAGATGACTCTGCCAGAGTAAGCAGCCTCCAACCACTGTCCAAAGTGAAACCTGTCCCGAGCTGCCCCACACACTCCTCAGTAAGAACACGGGAGGCAAGGGGCTCCCGCACAGCTGCCAGCTGCTTCCCTGCCAAAACACCTGGAGCTGCTCCTCTGCCTCTCAGCAACTGCTTCAGGTCAGGCTGGGTGAATTTCCCAGGGAGCCCGTTTTCACTGGCCAGGCCAATGGCAGCGGCCATGTTTCTGCCTTTTCAAATCATCGAATCAGGCAGGACCACAGGATGCAGTTCTGCCCACGGAG</dnaseq>|
 
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[[Category:Intronic(AS)]]
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[[Category:Intronic(AS)]][[Category:lnc-C9orf37-1]]

Revision as of 13:45, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-C9orf37-1:1

Source

LNCipedia2.1

Same with

NONHSAT135748

Classification

intronic(AS)

Length

2550 nt

Genomic location

chr9-:140503038..140506038

Exon number

2

Exons

140503038..140505352,140505804..140506038

Genome context

Sequence
000001 GTTGTTGTTG TTGTTGTTGT TGTTTTTGAG ACACGGTCTC ACTCCCGCCG CCCAGGCTAG TGTGCAGTGG CACGATCTCG 000080
000081 GCTCACTGCA GCCTTAACCT CCTGTGTTCA AGCGATCCAC CCATCTCAGC CCCGCAAGTA GCTAGGACTA CAGGCACGTG 000160
000161 CCACCACACC TGGGTTTTGT TTTTTGTTTT TTGTTTTTCT TATAGAGACA GGGTTTTGCC ATGCTGTCCA GGCTGACATG 000240
000241 GTGAAACCCC ATCTCTACTA AAAATACAAA AAAGGCCGGG CACGGTGGCT CATGCCTGTA ATCCCAGCAC TTCGGGAGGC 000320
000321 CAAGGCAGGC AGATCACCTG AGGTCAGGAG TTCCAGACCA GCCTGACCGA CATGGAGAAA CCCCATCTCT ACTAGAAATA 000400
000401 CGAAATTAGC TGGGCATGGT GGCACATGCC TGTAATCCCA GCTACCAGGG AGGCTGAGGC AGGAGAATCG CTTGAACCTG 000480
000481 GGAGGCGGAG GTTGCAGTGA GCCGAGATCG CGCCACTGCA CTCCAGCCTG AGCAACAAGA GTGAAACTCC ATCTCAAAAA 000560
000561 AAAAATACAA AAATTAGCCA GGCATGGTGG CACACGCCTG TAATCCCAGC TACTTGGGAG GCTGAGGCAT GAGGATCACT 000640
000641 TAAACCCAGG AGGCAGAGGT TGCAGTGAGC TGAGATCGCA CAAATGCACT TTAGCCTGGG TGACAGAGCG AGACTTCATC 000720
000721 TCAAAAAGAA AAAAAAAAGA AAAATGCTGG AACCCACAGA GGATGCCGGA AAGGGGGCAG TGGTCCCCAG ACTAACCCGT 000800
000801 ATGCCAGCCA AGCACCCTCA AGTGATCCCA GCTGGTGGCA CAGAACTGAA GATTAACCCT GCCCTCACTG TCCAGATTCC 000880
000881 TAACCCACAA CGCTGTGAGA TATAATAAAA TGGTTGTGTT AACTGTTTTA AGAATGGTGT CTGACTTGAG GTGACCGCGA 000960
000961 CTTTTACGTA GCAGTAGGTA ACTGGAACAG ATGTCCAACC TCACTAGAAA TTACAGAAAA CCCGGCCGGG CGCAGTGGCT 001040
001041 CAGCCTGTAA TCCCAGCACT GTGGGAGGCC GAGGCGGGCA GATCACGAGG TCAGGAGATC GAGATCATCC TGGCTGACAC 001120
001121 GGTGAAACCC CCGTCTCTAC TAAAAATACA AAAAATTAGC CGGGTGTGGT GGCGGGCGCC TGTAGTCCCA GCTACTCAGG 001200
001201 AGGCTGAGGC AGGAGAATGG CGTGAACCCG GAAGGTGGAG CTTGCAGGGA AAGCCCAAAT GACCTACCAT TTCAATCCAT 001280
001281 CAGATTGACA AATATTAAAT GTCTCGACAC AGCTGGGCGC AGTGGCTCAC GCCTGTAATC CCAACACTTT GGGGGGCCAA 001360
001361 GGCGAGCGGA TTGCTTGAGG CCAGAAGTGT GACAGCAGCC TAGGTAACAC GGTGAAACCC CATCTCTACC AAAACTACCA 001440
001441 AAGATTAGCT GGGTGTGGTG GCGCGTGCCC CTGGTCCCAG TCACTCAGGA GGCTGTGGTG GGAGCCCCGG AGGAAGGAGT 001520
001521 TGCAGTGAGC CAAGATTGTA CCACTGCACT CCAGTCTGGG TGACAAAGTG AGACCTCATC TCAAATAAAA TCAATGTCTT 001600
001601 GGGGCCAGGC ACAGTGGCTC ACGCCTGTAA TCCCAGCACT TTAAGAGGCT GAGGCGGGCG GATCACCTGA GGTTCGGAGT 001680
001681 TCCAGGCCCG CCTGACCAAC ACGGAGAAAC CCCGTCTCTA CTAAAAATAC AAAATTAGCC AGGCCTGGTG GCGCGTGCCT 001760
001761 GTAGTCCCAG CTACTCGGGA GTCTGAGGCA GAAGAATCAC TTGAACCAGG GAGGCAGAGG TTGCGGTGAG CAGCTGAGAT 001840
001841 TGCACCACTG CACTCCAGCC TGGGTAACAA GAGCAACGTA AATAAATAAA TAAATAAATA AATGTCTCAA CACACGTTGG 001920
001921 AGGGAGGTGG AACACAAACA CCCCTTATTC CAGTCAAACT GCAGACAAGT ACGAGGTTCT GGCAAAGAGT GGGACAGGTC 002000
002001 TACTGTAATT TTACCTGTGC ATACCAGGAG ACCCAGAATT CCGCTTAGAA TCTCATGGTA TTTAACCGGG AGCCTCACAC 002080
002081 GCCACTGCTC CTACTAGCAA AGCATCGCGA AAACCGTCAT GGGACATTGA CTCCACAAAA ACAAACAGTA TGCAACTGAC 002160
002161 CCTTGGGTCA TCCTAAGGGT CCAGGTTCTG TGATCTTCCC AACGCCCATG CAGATGGCCC CGTTTTGCAC ATACACCAAG 002240
002241 GCTCTTTGAG ATGACTCTGC CAGAGTAAGC AGCCTCCAAC CACTGTCCAA AGTGAAACCT GTCCCGAGCT GCCCCACACA 002320
002321 CTCCTCAGTA AGAACACGGG AGGCAAGGGG CTCCCGCACA GCTGCCAGCT GCTTCCCTGC CAAAACACCT GGAGCTGCTC 002400
002401 CTCTGCCTCT CAGCAACTGC TTCAGGTCAG GCTGGGTGAA TTTCCCAGGG AGCCCGTTTT CACTGGCCAG GCCAATGGCA 002480
002481 GCGGCCATGT TTCTGCCTTT TCAAATCATC GAATCAGGCA GGACCACAGG ATGCAGTTCT GCCCACGGAG
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