Difference between revisions of "NONHSAT022022"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>cccagccgccgcGTAAGGACCAGCAgccgggcccggccggcggcggAGGAGACTTCCCAAGTAAGAAGCGGAAGAGGAGCCGCTGGAACCAAGACACAATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATTCCCCCTGGACTTACTCGAGAACAAGAAAGAGCTTATATAGGTAAATATACGTTCTGCATCCAAATGCACTTTGAGATTGTTACGATTTATTCTGAGCAAGATCTGCATTTTTTGAAAGTTTGAGATTGTAGTTATCTTTTTTGAGATGAGATACTTTCACGACTTTGGTATCATCTGTCAGTTTTTGCCCAGTGAGTTCTGCATTTGCAGCTCCTTGTTTTGGTCTGTTCGTAACTGCAGTGTTCTCCATGAGTATCAGGAAGGTAGGGTTTCACTTAGGAGTAAGAACAGTCCCCAGTCCAGCAGCCACCCTTTTCAGCTGCTGTTCATTGCCAGTTGATGAGGTGAGTGTCATCTGCCTCTCTGGACAGGCCCCAGTGGAGAACACCGCAGGTACTGTAAACCAAGTACTTTTCACAGCGTGGCCTTTCACCATAATTTTATATTTCTCCCCCTAAAATGTGGTCTTTTACTTTTTATAGGTACTTTCTG</dnaseq>| | sequence = <dnaseq>cccagccgccgcGTAAGGACCAGCAgccgggcccggccggcggcggAGGAGACTTCCCAAGTAAGAAGCGGAAGAGGAGCCGCTGGAACCAAGACACAATGGAACAGAAGACAGTGATTCCAGGAATGCCTACAGTTATTCCCCCTGGACTTACTCGAGAACAAGAAAGAGCTTATATAGGTAAATATACGTTCTGCATCCAAATGCACTTTGAGATTGTTACGATTTATTCTGAGCAAGATCTGCATTTTTTGAAAGTTTGAGATTGTAGTTATCTTTTTTGAGATGAGATACTTTCACGACTTTGGTATCATCTGTCAGTTTTTGCCCAGTGAGTTCTGCATTTGCAGCTCCTTGTTTTGGTCTGTTCGTAACTGCAGTGTTCTCCATGAGTATCAGGAAGGTAGGGTTTCACTTAGGAGTAAGAACAGTCCCCAGTCCAGCAGCCACCCTTTTCAGCTGCTGTTCATTGCCAGTTGATGAGGTGAGTGTCATCTGCCTCTCTGGACAGGCCCCAGTGGAGAACACCGCAGGTACTGTAAACCAAGTACTTTTCACAGCGTGGCCTTTCACCATAATTTTATATTTCTCCCCCTAAAATGTGGTCTTTTACTTTTTATAGGTACTTTCTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG008625]] |
Revision as of 13:46, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT022022 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
632 nt |
| Genomic location |
chr11-:64543518..64545509 |
| Exon number |
2 |
| Exons |
64543518..64544098,64545459..64545509 |
| Genome context |
|
| Sequence |
000001 cccagccgcc gcGTAAGGAC CAGCAgccgg gcccggccgg cggcggAGGA GACTTCCCAA GTAAGAAGCG GAAGAGGAGC 000080
000081 CGCTGGAACC AAGACACAAT GGAACAGAAG ACAGTGATTC CAGGAATGCC TACAGTTATT CCCCCTGGAC TTACTCGAGA 000160 000161 ACAAGAAAGA GCTTATATAG GTAAATATAC GTTCTGCATC CAAATGCACT TTGAGATTGT TACGATTTAT TCTGAGCAAG 000240 000241 ATCTGCATTT TTTGAAAGTT TGAGATTGTA GTTATCTTTT TTGAGATGAG ATACTTTCAC GACTTTGGTA TCATCTGTCA 000320 000321 GTTTTTGCCC AGTGAGTTCT GCATTTGCAG CTCCTTGTTT TGGTCTGTTC GTAACTGCAG TGTTCTCCAT GAGTATCAGG 000400 000401 AAGGTAGGGT TTCACTTAGG AGTAAGAACA GTCCCCAGTC CAGCAGCCAC CCTTTTCAGC TGCTGTTCAT TGCCAGTTGA 000480 000481 TGAGGTGAGT GTCATCTGCC TCTCTGGACA GGCCCCAGTG GAGAACACCG CAGGTACTGT AAACCAAGTA CTTTTCACAG 000560 000561 CGTGGCCTTT CACCATAATT TTATATTTCT CCCCCTAAAA TGTGGTCTTT TACTTTTTAT AGGTACTTTC TG |
Predicted Small Protein
| Name | NONHSAT022022_smProtein_98:262 |
| Length | 55 |
| Molecular weight | 6328.3601 |
| Aromaticity | 0.111111111111 |
| Instability index | 45.037037037 |
| Isoelectric point | 6.02154541016 |
| Runs | 9 |
| Runs residual | 0.00397470641373 |
| Runs probability | 0.0340144065635 |
| Amino acid sequence | MEQKTVIPGMPTVIPPGLTREQERAYIGKYTFCIQMHFEIVTIYSEQDLHFLKV |
| Secondary structure | LLLEEELLLLLLLLLLLLLHHHHHHHHLLEEEEEEEEEEEEEEELLLLEEEEEL |
| PRMN | - |
| PiMo | - |
