Difference between revisions of "Lnc-ID3-4:1"

From LncRNAWiki
Jump to: navigation, search
(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
Line 42: Line 42:
 
sequence = <dnaseq>GGAAGGCTGAGAGCCGTCTCCCAGCTCCACCCTTGACTTCTGAACCTCAGTTGCTGCTTCTGTCAAATGGGAGCACGTCCACCTACCAGTGCTAGACTGGAGAGATCAGGAAAGGGGTGCTAAAGTTACAAACTGTAAAGGGCTGTAGCGATCACCAAGGCATCGGAAGGAAACTGGCCAAGAAAGGCAAAAACAGATTAGATCAAGGCTATCCAGTTGCAGAGCCCACGAGCTGAGCCATGCACTGTGGTTCTGCTGGAGCAGATGAGATGTATGAGTTCCCTGCAAACCCTCCTGTTTGTCTCAAGAGTGGGAGCCATGAAAAGCACCCCAAGAGTAGGGGGGAGACTTCATGGGAGCAGCCCTCAGAGAGACCCAGAAGATGCTCCTGTGCTCCTACCCAGAAATTCAGTCTCTTAAGGACCTTAGAGACAGTTTCATTCATGCATTAGTGAGGAGCGATGCCTACAACTTGCAAATGGAGAAACTGAGTTCAGAAAGGAGGGAGTGACTTGTCCAAGGTCACACCACAAGCTGGTGGTAGAAATCCCTCCAGAATGCAGGCATCCCAACATCTGGTTTTGTCCATTTCTCCATTCCCCTGACTCCTCACAAATGACTTGTCCCCTTGTCCCCAGCATGGTGATCTCTACCGGTCCTGAGCATTTAATATGGGCCAGACTCTTCGCCTTACTCTGACTCTCCAAGCCACCCTATGAAGTGGTATCCAAAGGCAACTTACTTACTTAAATACATGGCTTATTGATAGTATGTTACAAAACACATAAAATAATAATTGATGTATCTGCATTTCATGACCACCCTATAAATTGCACAATTCCTATTTTACAGATGAGAAAATTAAGGCTCAGAGATGGGAAAAGACTGTCTCAGGGACACACAGCGAGCAAGCAACAGGGTGAGGATTAGTATCCAGGCATCTCTGACTCCAAAGCAGGGGTGTCTTGTCCACACCCCAAGCTGCTGTCAGGGAACAGATGGGAGAGCCTGCAAGGGGAGGTGAGAGGAAGGTGCTGAGCCCCAGTCATGAGCGAGGTGACAGTTATTGTAGTGGCTAAACAGGTGGCCCCTGAGATCAGGCTGCCTGGGCTGGAATCCTGGTCTACCACTCCTTAGCACTGTGCGTTCAGGCAAACCATTGGTCCGCTCTGAGCCTTGACTTCCTTATCTGTAAAATGGGCGTGGTAATAATATGCCACCCTCATTAGGTTCCTGGAAGGGTTAAATGAGTGTGTAGCCCATGGTACATGCAATGGAAGTGCTGCCTCTTATTTGTGTGGCATTCTGCAGTGACTGTCTCGTGTACTCTCAATAGTGCTTATAACTCTTACGGGTTCTGGAGCTAGCCACCTGGCCTCTGCTACCACTTCCTAGCAGGGCGGCAGAGCTTAGAGGGAGATTTAAGGTGAGGATGGTGAGGTTTAAGTCCTGGGTCCCTCATTGGCATGGCCTTGTACTTCATTATTTAAAGAGACCCCCCCGCCCTCAGTATTGTATAACCTTTACTGACATCCTGCCAAGCCTGGATCTGCCCCTGTGTGAGGAACTCTACCTCTCTGTGTGCCTCAGTTTTCTCATCTGTTAAGTGGGAAGAATGTTAATTGTGCCAAATAAATGAATTAATACGTGTAGAATGCTTTAAAAGTGCCTGGTGCATAGTAAATGCCCAATACCTATTGGCTTCTTAAGTAAATCTCCAGTGGTAAAT</dnaseq>|
 
sequence = <dnaseq>GGAAGGCTGAGAGCCGTCTCCCAGCTCCACCCTTGACTTCTGAACCTCAGTTGCTGCTTCTGTCAAATGGGAGCACGTCCACCTACCAGTGCTAGACTGGAGAGATCAGGAAAGGGGTGCTAAAGTTACAAACTGTAAAGGGCTGTAGCGATCACCAAGGCATCGGAAGGAAACTGGCCAAGAAAGGCAAAAACAGATTAGATCAAGGCTATCCAGTTGCAGAGCCCACGAGCTGAGCCATGCACTGTGGTTCTGCTGGAGCAGATGAGATGTATGAGTTCCCTGCAAACCCTCCTGTTTGTCTCAAGAGTGGGAGCCATGAAAAGCACCCCAAGAGTAGGGGGGAGACTTCATGGGAGCAGCCCTCAGAGAGACCCAGAAGATGCTCCTGTGCTCCTACCCAGAAATTCAGTCTCTTAAGGACCTTAGAGACAGTTTCATTCATGCATTAGTGAGGAGCGATGCCTACAACTTGCAAATGGAGAAACTGAGTTCAGAAAGGAGGGAGTGACTTGTCCAAGGTCACACCACAAGCTGGTGGTAGAAATCCCTCCAGAATGCAGGCATCCCAACATCTGGTTTTGTCCATTTCTCCATTCCCCTGACTCCTCACAAATGACTTGTCCCCTTGTCCCCAGCATGGTGATCTCTACCGGTCCTGAGCATTTAATATGGGCCAGACTCTTCGCCTTACTCTGACTCTCCAAGCCACCCTATGAAGTGGTATCCAAAGGCAACTTACTTACTTAAATACATGGCTTATTGATAGTATGTTACAAAACACATAAAATAATAATTGATGTATCTGCATTTCATGACCACCCTATAAATTGCACAATTCCTATTTTACAGATGAGAAAATTAAGGCTCAGAGATGGGAAAAGACTGTCTCAGGGACACACAGCGAGCAAGCAACAGGGTGAGGATTAGTATCCAGGCATCTCTGACTCCAAAGCAGGGGTGTCTTGTCCACACCCCAAGCTGCTGTCAGGGAACAGATGGGAGAGCCTGCAAGGGGAGGTGAGAGGAAGGTGCTGAGCCCCAGTCATGAGCGAGGTGACAGTTATTGTAGTGGCTAAACAGGTGGCCCCTGAGATCAGGCTGCCTGGGCTGGAATCCTGGTCTACCACTCCTTAGCACTGTGCGTTCAGGCAAACCATTGGTCCGCTCTGAGCCTTGACTTCCTTATCTGTAAAATGGGCGTGGTAATAATATGCCACCCTCATTAGGTTCCTGGAAGGGTTAAATGAGTGTGTAGCCCATGGTACATGCAATGGAAGTGCTGCCTCTTATTTGTGTGGCATTCTGCAGTGACTGTCTCGTGTACTCTCAATAGTGCTTATAACTCTTACGGGTTCTGGAGCTAGCCACCTGGCCTCTGCTACCACTTCCTAGCAGGGCGGCAGAGCTTAGAGGGAGATTTAAGGTGAGGATGGTGAGGTTTAAGTCCTGGGTCCCTCATTGGCATGGCCTTGTACTTCATTATTTAAAGAGACCCCCCCGCCCTCAGTATTGTATAACCTTTACTGACATCCTGCCAAGCCTGGATCTGCCCCTGTGTGAGGAACTCTACCTCTCTGTGTGCCTCAGTTTTCTCATCTGTTAAGTGGGAAGAATGTTAATTGTGCCAAATAAATGAATTAATACGTGTAGAATGCTTTAAAAGTGCCTGGTGCATAGTAAATGCCCAATACCTATTGGCTTCTTAAGTAAATCTCCAGTGGTAAAT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-ID3-4]]

Revision as of 14:02, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

lnc-ID3-4:1

Source

LNCipedia2.1

Same with

NONHSAT001536

Classification

intergenic

Length

1729 nt

Genomic location

chr1-:23940283..23945957

Exon number

2

Exons

23940283..23941821,23945768..23945957

Genome context

Sequence
000001 GGAAGGCTGA GAGCCGTCTC CCAGCTCCAC CCTTGACTTC TGAACCTCAG TTGCTGCTTC TGTCAAATGG GAGCACGTCC 000080
000081 ACCTACCAGT GCTAGACTGG AGAGATCAGG AAAGGGGTGC TAAAGTTACA AACTGTAAAG GGCTGTAGCG ATCACCAAGG 000160
000161 CATCGGAAGG AAACTGGCCA AGAAAGGCAA AAACAGATTA GATCAAGGCT ATCCAGTTGC AGAGCCCACG AGCTGAGCCA 000240
000241 TGCACTGTGG TTCTGCTGGA GCAGATGAGA TGTATGAGTT CCCTGCAAAC CCTCCTGTTT GTCTCAAGAG TGGGAGCCAT 000320
000321 GAAAAGCACC CCAAGAGTAG GGGGGAGACT TCATGGGAGC AGCCCTCAGA GAGACCCAGA AGATGCTCCT GTGCTCCTAC 000400
000401 CCAGAAATTC AGTCTCTTAA GGACCTTAGA GACAGTTTCA TTCATGCATT AGTGAGGAGC GATGCCTACA ACTTGCAAAT 000480
000481 GGAGAAACTG AGTTCAGAAA GGAGGGAGTG ACTTGTCCAA GGTCACACCA CAAGCTGGTG GTAGAAATCC CTCCAGAATG 000560
000561 CAGGCATCCC AACATCTGGT TTTGTCCATT TCTCCATTCC CCTGACTCCT CACAAATGAC TTGTCCCCTT GTCCCCAGCA 000640
000641 TGGTGATCTC TACCGGTCCT GAGCATTTAA TATGGGCCAG ACTCTTCGCC TTACTCTGAC TCTCCAAGCC ACCCTATGAA 000720
000721 GTGGTATCCA AAGGCAACTT ACTTACTTAA ATACATGGCT TATTGATAGT ATGTTACAAA ACACATAAAA TAATAATTGA 000800
000801 TGTATCTGCA TTTCATGACC ACCCTATAAA TTGCACAATT CCTATTTTAC AGATGAGAAA ATTAAGGCTC AGAGATGGGA 000880
000881 AAAGACTGTC TCAGGGACAC ACAGCGAGCA AGCAACAGGG TGAGGATTAG TATCCAGGCA TCTCTGACTC CAAAGCAGGG 000960
000961 GTGTCTTGTC CACACCCCAA GCTGCTGTCA GGGAACAGAT GGGAGAGCCT GCAAGGGGAG GTGAGAGGAA GGTGCTGAGC 001040
001041 CCCAGTCATG AGCGAGGTGA CAGTTATTGT AGTGGCTAAA CAGGTGGCCC CTGAGATCAG GCTGCCTGGG CTGGAATCCT 001120
001121 GGTCTACCAC TCCTTAGCAC TGTGCGTTCA GGCAAACCAT TGGTCCGCTC TGAGCCTTGA CTTCCTTATC TGTAAAATGG 001200
001201 GCGTGGTAAT AATATGCCAC CCTCATTAGG TTCCTGGAAG GGTTAAATGA GTGTGTAGCC CATGGTACAT GCAATGGAAG 001280
001281 TGCTGCCTCT TATTTGTGTG GCATTCTGCA GTGACTGTCT CGTGTACTCT CAATAGTGCT TATAACTCTT ACGGGTTCTG 001360
001361 GAGCTAGCCA CCTGGCCTCT GCTACCACTT CCTAGCAGGG CGGCAGAGCT TAGAGGGAGA TTTAAGGTGA GGATGGTGAG 001440
001441 GTTTAAGTCC TGGGTCCCTC ATTGGCATGG CCTTGTACTT CATTATTTAA AGAGACCCCC CCGCCCTCAG TATTGTATAA 001520
001521 CCTTTACTGA CATCCTGCCA AGCCTGGATC TGCCCCTGTG TGAGGAACTC TACCTCTCTG TGTGCCTCAG TTTTCTCATC 001600
001601 TGTTAAGTGG GAAGAATGTT AATTGTGCCA AATAAATGAA TTAATACGTG TAGAATGCTT TAAAAGTGCC TGGTGCATAG 001680
001681 TAAATGCCCA ATACCTATTG GCTTCTTAAG TAAATCTCCA GTGGTAAAT
[back to top]