Difference between revisions of "Lnc-MBL2-2:3"

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sequence = <dnaseq>CCAAAACCAACCGTGGCTACCCATTCAAGACTGTTTCCACACTGTGGAAGCTTTGTACTTTCACTCTGCTCAATAAAGCCTGCAGCTTTTTCTCACTCTCAGTCCATGTCTCTTTCACTCACTGTGGTCAGCTTCCACACCATTTCTTTGGTGTGGCTTGGCAAGAACCTCAGGTGTTACATCTTGGCGAGCCAGACAGGAGACTCCAGAAAAGGGGTGATTTTCCTGTACCAGTCCAATGCCTCCAGAGGAAGATCATACATTTGCCATTTTACTGCTTAGTACGCATGCTTGAGCCTGCTCGCCCAACTGCTGAGATCTTATTCAGAAACTGCTGATCACCAACTCCAGGTGTTTTTATTACACAAGACAAAAACGGAAAAACAGTAACAAATGATTGGTTAAGCCTTTCAAAACAAAGAAGTTGAAGGTCACTGGAATAGGTTCATTACACTCAAGCAAAGGCCTGGGGAAATGATAGAATTACCTCTGTTGACCCAGAAGAGCACCAAAAGCACCAGTGTGCAGAAATCAGAGACCTCAAGCTAAAAGTCATAAAAGGACAAGAACCTGGAAGTCGTCGAACTGTGGAAGCAAAAGACCTGTAATGCTCCTGCTTGCCGAGCTGTGAGCAGTGGTAGTAAAAGAGCAGTAACATTCTCTCCTGCTTGCCAAACAGGAGAGAAGCCACTGGCACCACTCCCTCCCACTCACTGAACTATAGAAGAGAAAAAATTGAAACACCAAAATTGGGGAAATGCGACTTTTGCGAAAATTTGAAAGTGCATGCTTCACAGAAGGAAGGGGGAGCTGGTCTATTATGTCTCACTATAACAAGACTAAAATTTTGCAAATAAATTGTTCCTGCCATAATTTATCCTTGGTAGAAATGAAGAAATTGGAGAGAGAAAAAATTGGATTCTAGGTCCTGACCATTGTTTTTGAATTTTTATTATTTTCCTACAATTTAGGCTAAATTCTGAACTATTTGCTGGCTACAAGAGGCCTCTAAAAAAGAGCTGGGTTTTAGTTTTCTTCATGCTCTTTAAAAACTGGCATATAATGGTGTGTATCTCTCGTTGTTTTACTTCTAAGAAACTGAAGGCATGATATTCTGAAGACTAGAGGTGATTCAATAGCCTATGAATCTTCTTCATTTGGAACCCCACTGGGCCTGATCTGTTTCCCATCACCAATGCACTTCTGCTAAACCTATATCCTATCAAGTACTCTCCCTAAATGCTCAGAGACCATAACAGAAGATGAGGGTGTGTGAGATTATAAAAGCCAAATTAGTGGAGTGGAATCTGGAGGCTAAAGCAACTCCATCTTGGATGCTAATCTGCCATGTTGGCTTCTGATTAACCCCAGTTCTGGAGGGCCTCTGAGGTTTCCAATTTATCTACTGTCCCTTGTGTAAGAACAAGTACTTATCATAAATCCTGCTATTAGGGCAAATTTCTACCCATTCCCTCTGAAGCATGTGCACCTCTCCTCTACATGTAATCTCCCCTACAATAGATAAACCCCTCTGGGTCTGGGGGCTAATAGTGTGGGAACCCATCATCTTGCCTCACTGCTGCACAAGCCACAGGTGTGGCTTCTGTTTCTAAGTCCCTATTAAATGTTTCTAGATACCAGATGTATCAACCTCTTTCTTCAGCCTCTCAGCTTCCTGGGACTTTGGGGTTGGTTTGCATAGACCTACCCACCAAAAAACTCTCACAGAGTCAGTCTTAAATACATACAGAGCACGGTTGGGAAAATTCCATGAATATTTATAGGGGAAGTCATGTGCTTGAAAATTGGATAAACTTGTATGTAACATACATTCCATTTTGACCTGGGGGTGAGGTTTCAGCTGGGATTCGACTGTTTATGTCAAAAGGTAAACTCTAGGGCAAAAAGAATTTGGACATAGTCTCTGCAAGCTGACTGA</dnaseq>|
 
sequence = <dnaseq>CCAAAACCAACCGTGGCTACCCATTCAAGACTGTTTCCACACTGTGGAAGCTTTGTACTTTCACTCTGCTCAATAAAGCCTGCAGCTTTTTCTCACTCTCAGTCCATGTCTCTTTCACTCACTGTGGTCAGCTTCCACACCATTTCTTTGGTGTGGCTTGGCAAGAACCTCAGGTGTTACATCTTGGCGAGCCAGACAGGAGACTCCAGAAAAGGGGTGATTTTCCTGTACCAGTCCAATGCCTCCAGAGGAAGATCATACATTTGCCATTTTACTGCTTAGTACGCATGCTTGAGCCTGCTCGCCCAACTGCTGAGATCTTATTCAGAAACTGCTGATCACCAACTCCAGGTGTTTTTATTACACAAGACAAAAACGGAAAAACAGTAACAAATGATTGGTTAAGCCTTTCAAAACAAAGAAGTTGAAGGTCACTGGAATAGGTTCATTACACTCAAGCAAAGGCCTGGGGAAATGATAGAATTACCTCTGTTGACCCAGAAGAGCACCAAAAGCACCAGTGTGCAGAAATCAGAGACCTCAAGCTAAAAGTCATAAAAGGACAAGAACCTGGAAGTCGTCGAACTGTGGAAGCAAAAGACCTGTAATGCTCCTGCTTGCCGAGCTGTGAGCAGTGGTAGTAAAAGAGCAGTAACATTCTCTCCTGCTTGCCAAACAGGAGAGAAGCCACTGGCACCACTCCCTCCCACTCACTGAACTATAGAAGAGAAAAAATTGAAACACCAAAATTGGGGAAATGCGACTTTTGCGAAAATTTGAAAGTGCATGCTTCACAGAAGGAAGGGGGAGCTGGTCTATTATGTCTCACTATAACAAGACTAAAATTTTGCAAATAAATTGTTCCTGCCATAATTTATCCTTGGTAGAAATGAAGAAATTGGAGAGAGAAAAAATTGGATTCTAGGTCCTGACCATTGTTTTTGAATTTTTATTATTTTCCTACAATTTAGGCTAAATTCTGAACTATTTGCTGGCTACAAGAGGCCTCTAAAAAAGAGCTGGGTTTTAGTTTTCTTCATGCTCTTTAAAAACTGGCATATAATGGTGTGTATCTCTCGTTGTTTTACTTCTAAGAAACTGAAGGCATGATATTCTGAAGACTAGAGGTGATTCAATAGCCTATGAATCTTCTTCATTTGGAACCCCACTGGGCCTGATCTGTTTCCCATCACCAATGCACTTCTGCTAAACCTATATCCTATCAAGTACTCTCCCTAAATGCTCAGAGACCATAACAGAAGATGAGGGTGTGTGAGATTATAAAAGCCAAATTAGTGGAGTGGAATCTGGAGGCTAAAGCAACTCCATCTTGGATGCTAATCTGCCATGTTGGCTTCTGATTAACCCCAGTTCTGGAGGGCCTCTGAGGTTTCCAATTTATCTACTGTCCCTTGTGTAAGAACAAGTACTTATCATAAATCCTGCTATTAGGGCAAATTTCTACCCATTCCCTCTGAAGCATGTGCACCTCTCCTCTACATGTAATCTCCCCTACAATAGATAAACCCCTCTGGGTCTGGGGGCTAATAGTGTGGGAACCCATCATCTTGCCTCACTGCTGCACAAGCCACAGGTGTGGCTTCTGTTTCTAAGTCCCTATTAAATGTTTCTAGATACCAGATGTATCAACCTCTTTCTTCAGCCTCTCAGCTTCCTGGGACTTTGGGGTTGGTTTGCATAGACCTACCCACCAAAAAACTCTCACAGAGTCAGTCTTAAATACATACAGAGCACGGTTGGGAAAATTCCATGAATATTTATAGGGGAAGTCATGTGCTTGAAAATTGGATAAACTTGTATGTAACATACATTCCATTTTGACCTGGGGGTGAGGTTTCAGCTGGGATTCGACTGTTTATGTCAAAAGGTAAACTCTAGGGCAAAAAGAATTTGGACATAGTCTCTGCAAGCTGACTGA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-MBL2-2]]
+
[[Category:Intergenic]][[Category:lnc-MBL2-2]][[Category:NONHSAG005930]]

Revision as of 14:24, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-MBL2-2:3

Source

LNCipedia2.1

Same with

NONHSAT013443

Classification

intergenic

Length

1939 nt

Genomic location

chr10-:54732073..54789884

Exon number

5

Exons

54732073..54733450,54734425..54734560,54735500..54735573,54782584..54782720,54789671..54789884

Genome context

Sequence
000001 CCAAAACCAA CCGTGGCTAC CCATTCAAGA CTGTTTCCAC ACTGTGGAAG CTTTGTACTT TCACTCTGCT CAATAAAGCC 000080
000081 TGCAGCTTTT TCTCACTCTC AGTCCATGTC TCTTTCACTC ACTGTGGTCA GCTTCCACAC CATTTCTTTG GTGTGGCTTG 000160
000161 GCAAGAACCT CAGGTGTTAC ATCTTGGCGA GCCAGACAGG AGACTCCAGA AAAGGGGTGA TTTTCCTGTA CCAGTCCAAT 000240
000241 GCCTCCAGAG GAAGATCATA CATTTGCCAT TTTACTGCTT AGTACGCATG CTTGAGCCTG CTCGCCCAAC TGCTGAGATC 000320
000321 TTATTCAGAA ACTGCTGATC ACCAACTCCA GGTGTTTTTA TTACACAAGA CAAAAACGGA AAAACAGTAA CAAATGATTG 000400
000401 GTTAAGCCTT TCAAAACAAA GAAGTTGAAG GTCACTGGAA TAGGTTCATT ACACTCAAGC AAAGGCCTGG GGAAATGATA 000480
000481 GAATTACCTC TGTTGACCCA GAAGAGCACC AAAAGCACCA GTGTGCAGAA ATCAGAGACC TCAAGCTAAA AGTCATAAAA 000560
000561 GGACAAGAAC CTGGAAGTCG TCGAACTGTG GAAGCAAAAG ACCTGTAATG CTCCTGCTTG CCGAGCTGTG AGCAGTGGTA 000640
000641 GTAAAAGAGC AGTAACATTC TCTCCTGCTT GCCAAACAGG AGAGAAGCCA CTGGCACCAC TCCCTCCCAC TCACTGAACT 000720
000721 ATAGAAGAGA AAAAATTGAA ACACCAAAAT TGGGGAAATG CGACTTTTGC GAAAATTTGA AAGTGCATGC TTCACAGAAG 000800
000801 GAAGGGGGAG CTGGTCTATT ATGTCTCACT ATAACAAGAC TAAAATTTTG CAAATAAATT GTTCCTGCCA TAATTTATCC 000880
000881 TTGGTAGAAA TGAAGAAATT GGAGAGAGAA AAAATTGGAT TCTAGGTCCT GACCATTGTT TTTGAATTTT TATTATTTTC 000960
000961 CTACAATTTA GGCTAAATTC TGAACTATTT GCTGGCTACA AGAGGCCTCT AAAAAAGAGC TGGGTTTTAG TTTTCTTCAT 001040
001041 GCTCTTTAAA AACTGGCATA TAATGGTGTG TATCTCTCGT TGTTTTACTT CTAAGAAACT GAAGGCATGA TATTCTGAAG 001120
001121 ACTAGAGGTG ATTCAATAGC CTATGAATCT TCTTCATTTG GAACCCCACT GGGCCTGATC TGTTTCCCAT CACCAATGCA 001200
001201 CTTCTGCTAA ACCTATATCC TATCAAGTAC TCTCCCTAAA TGCTCAGAGA CCATAACAGA AGATGAGGGT GTGTGAGATT 001280
001281 ATAAAAGCCA AATTAGTGGA GTGGAATCTG GAGGCTAAAG CAACTCCATC TTGGATGCTA ATCTGCCATG TTGGCTTCTG 001360
001361 ATTAACCCCA GTTCTGGAGG GCCTCTGAGG TTTCCAATTT ATCTACTGTC CCTTGTGTAA GAACAAGTAC TTATCATAAA 001440
001441 TCCTGCTATT AGGGCAAATT TCTACCCATT CCCTCTGAAG CATGTGCACC TCTCCTCTAC ATGTAATCTC CCCTACAATA 001520
001521 GATAAACCCC TCTGGGTCTG GGGGCTAATA GTGTGGGAAC CCATCATCTT GCCTCACTGC TGCACAAGCC ACAGGTGTGG 001600
001601 CTTCTGTTTC TAAGTCCCTA TTAAATGTTT CTAGATACCA GATGTATCAA CCTCTTTCTT CAGCCTCTCA GCTTCCTGGG 001680
001681 ACTTTGGGGT TGGTTTGCAT AGACCTACCC ACCAAAAAAC TCTCACAGAG TCAGTCTTAA ATACATACAG AGCACGGTTG 001760
001761 GGAAAATTCC ATGAATATTT ATAGGGGAAG TCATGTGCTT GAAAATTGGA TAAACTTGTA TGTAACATAC ATTCCATTTT 001840
001841 GACCTGGGGG TGAGGTTTCA GCTGGGATTC GACTGTTTAT GTCAAAAGGT AAACTCTAGG GCAAAAAGAA TTTGGACATA 001920
001921 GTCTCTGCAA GCTGACTGA
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