Difference between revisions of "Lnc-RNASEH1-6:1"

Revision as of 14:37, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-RNASEH1-6:1
Source	LNCipedia2.1
Same with	NONHSAT068789
Classification	intergenic
Length	2674 nt
Genomic location	chr2-:4675808..4703812
Exon number	5
Exons	4675808..4677980,4682484..4682649,4698903..4699119,4700103..4700163,4703756..4703812
Genome context
Sequence	000001 CTTCTCCAAA GAGGCGGGGG TCTCAGCCTG GTTCTTCCTT GTTCCTCGTC CTCTGAGGTA GCAACTGCCT CATCTTTTCC 000080 000081 ATCTATGGAG TGTGGAATAT GTGCCCTACT TCATTCAGGA ATGTTGGACA AACCAGCTAT TTAGAGAGTG AAGGAGAGGA 000160 000161 ACTTCCGAGA GCAACCGGCC CCCAAGAGAA ACCCAGGGAC TCCTGCCCTT CGGCAGCTTT GTCCATGTGC TGCTCACACC 000240 000241 AAAAAGCACT CGAGGGTGAC CTGCACCAAA AATGCATTGC CGTAGTCTGG GCACAGTGGA TCACGCCTGT AATCCCAGCT 000320 000321 CTTTGGGAGG CCAAGAGAAG TTAGAACACT TGAAATTAGC TAAGCGAGAA TGCCATCAGC AGTGCATCGA TCTCAGCTGC 000400 000401 ATCCAGGTGT ATCAGTTGAA TGGCAGAGGG ACTAGAAATT ACATTTCACG AAGAAAATTT ACAGAACTAA AGATATTTAG 000480 000481 GCTGCAAAAG AAAAGACTAA GGCACTGTGC TAAGTTGGAC TTACAGAGAT GAATAAGATT TGGCCACATC TTCAAGGAGC 000560 000561 TCAGACCTTC ATGGACGTAC CAAATATATA CAGAACTAAC TCTACTGCTT ATCATAATGA GAGCTGTGCT ATGGATATTT 000640 000641 GAAAGTTAGA GAGATTTATT TTCAACAGAA TAATAAAGTC AACTTTCACA AACTGGTGAC AGATGATCTG GGCCTTGCAG 000720 000721 ACAGGGGAGG ACTGACAGAT TGAGAAGAGT ATTTGGTTAA AAACGGATCA TAAACTGGTA TAAATATCTA AACAAACTCA 000800 000801 TGAGAATGAG CAGAGTCAGA CACAATAAAA TAATTCAAAG ATATATCAGA TAAACCTGGA CCCAAAAGTC ATGACTTTTT 000880 000881 CTTTTCAGTT AACTCTGAAC AATTTACAAT AACTTCCTCA ATTATTGTTT GTCTCATTTT AACATTTTGT AATAACACCT 000960 000961 ATGTCTCCAT ATTGGTATGA AGATTAAATG AAAATACATC TATGTTAGAT AGTCCCTAAG TTTCTGTCCC TGATATAAGT 001040 001041 CCACCCTCCC CACCATCATG TGATCACACG CAGGTGCACA TGCACAGATG TATACATGCA TGCCGTTATG GGGACAGTAA 001120 001121 TTGCAAATAT CAATACTGTT ATGGTTGTTA CTTCAGCCAT TGCACAAGTG TAGACCTCTG GATCAACACA CATACGTATG 001200 001201 TGTATGTGTA ACAAATATAT GGCTAATAAT GCATAGGTTT CATAGCTATA CCTTGAAATC AATTTATTAA AGGGATGTGT 001280 001281 CCTTCCCATG CTGACTCACC TACTGCGGCC CAAAAGCAAC AACGTAAACT GCCCTGGATA AAACATCTGC AGACAAGAGA 001360 001361 TCTCTAAGCT AAGCTACAGC TTCATCAAGC ATGGAGTTAT CTCATTTCAT AGCTTCACAC ACACAAAGGC GCGCGCACAC 001440 001441 ACACACACAC ACACACACAG CTCTCAGCTG GAGACCGTCA GGGAAAACAA GTACCAGTGA GACCTGGGGA TCTTCATTTG 001520 001521 ATTTTGTCTA CTGGGTGAGG CTGTGTTGAA AACACTTTGA CAGAGGGCTC TTCTCTTGGG GCTCATCAAA TATTGCTGGT 001600 001601 AGAGGGTTTG CTTGCTTTAA ATATTCCTTT CCTCAGGTAA CGAAGAATAC CATGTAATTT GTAATGATAA CTTGGATAAT 001680 001681 GAATGCACAC TGTAGTCAGC CATTACCAGT GGTAATTGGT CTTCCTTTCA TCTCCTGTCA AGCAGAGTGG TTAGGATTAG 001760 001761 GACCAAAAGG CAGCTATCAT CTCTCTCATT TCCTGACTCA GACAAAAGGC AAAAAAAAAA AGGTGCCTGC TTGTGCTGAT 001840 001841 AGGTGTCTGA TCAAAGCGGC TGAAAGCTGT CAGAAGCCAG CCAGCCTCAG CACCTGACTA CTCCTTAATG CAGCTTTGCC 001920 001921 TTTGATGTAC AGGCAGTCCA ACCGGGGTTC TATTTATGTA AAAAAAAATA A

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CTTCTCCAAAGAGGCGGGGGTCTCAGCCTGGTTCTTCCTTGTTCCTCGTCCTCTGAGGTAGCAACTGCCTCATCTTTTCCATCTATGGAGTGTGGAATATGTGCCCTACTTCATTCAGGAATGTTGGACAAACCAGCTATTTAGAGAGTGAAGGAGAGGAACTTCCGAGAGCAACCGGCCCCCAAGAGAAACCCAGGGACTCCTGCCCTTCGGCAGCTTTGTCCATGTGCTGCTCACACCAAAAAGCACTCGAGGGTGACCTGCACCAAAAATGCATTGCCGTAGTCTGGGCACAGTGGATCACGCCTGTAATCCCAGCTCTTTGGGAGGCCAAGAGAAGTTAGAACACTTGAAATTAGCTAAGCGAGAATGCCATCAGCAGTGCATCGATCTCAGCTGCATCCAGGTGTATCAGTTGAATGGCAGAGGGACTAGAAATTACATTTCACGAAGAAAATTTACAGAACTAAAGATATTTAGGCTGCAAAAGAAAAGACTAAGGCACTGTGCTAAGTTGGACTTACAGAGATGAATAAGATTTGGCCACATCTTCAAGGAGCTCAGACCTTCATGGACGTACCAAATATATACAGAACTAACTCTACTGCTTATCATAATGAGAGCTGTGCTATGGATATTTGAAAGTTAGAGAGATTTATTTTCAACAGAATAATAAAGTCAACTTTCACAAACTGGTGACAGATGATCTGGGCCTTGCAGACAGGGGAGGACTGACAGATTGAGAAGAGTATTTGGTTAAAAACGGATCATAAACTGGTATAAATATCTAAACAAACTCATGAGAATGAGCAGAGTCAGACACAATAAAATAATTCAAAGATATATCAGATAAACCTGGACCCAAAAGTCATGACTTTTTCTTTTCAGTTAACTCTGAACAATTTACAATAACTTCCTCAATTATTGTTTGTCTCATTTTAACATTTTGTAATAACACCTATGTCTCCATATTGGTATGAAGATTAAATGAAAATACATCTATGTTAGATAGTCCCTAAGTTTCTGTCCCTGATATAAGTCCACCCTCCCCACCATCATGTGATCACACGCAGGTGCACATGCACAGATGTATACATGCATGCCGTTATGGGGACAGTAATTGCAAATATCAATACTGTTATGGTTGTTACTTCAGCCATTGCACAAGTGTAGACCTCTGGATCAACACACATACGTATGTGTATGTGTAACAAATATATGGCTAATAATGCATAGGTTTCATAGCTATACCTTGAAATCAATTTATTAAAGGGATGTGTCCTTCCCATGCTGACTCACCTACTGCGGCCCAAAAGCAACAACGTAAACTGCCCTGGATAAAACATCTGCAGACAAGAGATCTCTAAGCTAAGCTACAGCTTCATCAAGCATGGAGTTATCTCATTTCATAGCTTCACACACACAAAGGCGCGCGCACACACACACACACACACACACAGCTCTCAGCTGGAGACCGTCAGGGAAAACAAGTACCAGTGAGACCTGGGGATCTTCATTTGATTTTGTCTACTGGGTGAGGCTGTGTTGAAAACACTTTGACAGAGGGCTCTTCTCTTGGGGCTCATCAAATATTGCTGGTAGAGGGTTTGCTTGCTTTAAATATTCCTTTCCTCAGGTAACGAAGAATACCATGTAATTTGTAATGATAACTTGGATAATGAATGCACACTGTAGTCAGCCATTACCAGTGGTAATTGGTCTTCCTTTCATCTCCTGTCAAGCAGAGTGGTTAGGATTAGGACCAAAAGGCAGCTATCATCTCTCTCATTTCCTGACTCAGACAAAAGGCAAAAAAAAAAAGGTGCCTGCTTGTGCTGATAGGTGTCTGATCAAAGCGGCTGAAAGCTGTCAGAAGCCAGCCAGCCTCAGCACCTGACTACTCCTTAATGCAGCTTTGCCTTTGATGTACAGGCAGTCCAACCGGGGTTCTATTTATGTAAAAAAAAATAATCAGGATTGTAATAGAACAGGAGAAAGTGTCATTTTCTATTTTGATTCCAGTTTTGCAGTCTGACACCTATAGGAAATGTGGACTAATTCTGTCCAGAGTATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACTCAATAAAATAAAATATCTTTGAAACTTCATCAAATACATTTGGCAGTGAGCAGAAGTTAGATTGCTGGTAGAAAGAAATTATCCTTCTTGGAAAGTAAAAAAAAAATGCTTAAGTAAAATTGCAGCAGTTTTGACATGTGTATTTTATGTTTCAGAAATTCTACAGGTTATAGGTTTATAAATGGAGAACTGGTCTTGGATTTAAATGAATTGGCATCGTATCTCAGACTTCTAGCTTTCTACCCATGTGAATTTAGGTGCGTACTAATCACATATGTGTTTTAAGTTTATCACTGGCTATATACATGGTTACTTTTGTATATGCCTGTGCATTGAATGAAAATACCTGGCATGTGGTTGTTATAAGCAATAGACAGTTTTTGGCCAGAGAGCCAGGCAGACAAGTGTTAATATCACTTAAGCCCTCTGTGTCTCAAGTTCAAAATTTCTAAAATGAGTGAATATAATATTTGTTTGAATTAAAGTATACAAAGCATGTATCTCAGTGTCTAAGACATTGTAAGACACCAATAAATGTCCAGTATTTCTGTT</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:lnc-RNASEH1-6]]