Difference between revisions of "Lnc-TPRA1-1:4"
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sequence = <dnaseq>AGGTGATGGGAACTGGGGGGAGCAAAGAGTGGGGAACTGGGCAGGGTCTGGCGGGGCTGTGGTGGGGGAAGCTGAAGCATGAAGGCTCGAGGAGCACACAGACACCTACACACAGCTCCGCGGGCATGTGGGGACCCAGACCCACCCCCACAGCAGACACCCCCACAGAGCACTCATGGCCCCCACAGAAATACACCCACACTCATCACAGCAAACCAAAACAATCACACGCCGGTACACAAACACACACACCCCCGCACCAATCCAGGCAGACACAAAGCTCACGGCGACAGGCAGATCTGATTCACACAGACACAGGCACAGGTGCTTCCTGATGCCACCCTCTCTTGGTCACGTGCCAGCACTTGGAGGGAGGAAAGTGCCTCACCAGGCTGAGATGCCCAAGGGACCCCCCAGGGAGGGAAAGCAGGACACACTGGGACAGTTGCTTCCAGCCCTGTCCACACCCTTGTGCCCATCAGGCCAAGCCACTGGTGAATATGCTGCAAAAAATATGCTGGAACTTCTATGAATACCACAGGGTGTGAGAAGAAAACATTAGAACTTCTATTTTGTACCTGTGTTACTCCACAACAAGAAAGCAATCAGCTTGATCAATGCCTACTGTAAAGACGGCACCGCCCTCCGGAGGTCCTTTCTCAGCCCTGGTGTTCGGACAGCCACATCCCCTCGCAGCAGGGGGAGGCCTGAAGCATAGAGGGGCCCATGCAGGTCTATTCTGTTTCAGCGAATTGCCTGGGAAATAATCCAGGATCCATTTCGTGTGGTCATCTTGTCTCCCTGGTCCCCTCCAGCCTTTCCTCATCTTTTGTGACCTGGTCACTCTGGAAGGGCGCTGGCCAGTTAGTCCACAGGATGGGCCTCCCCTGGGGCTTTTCTGATGCTTCCTTATGATGGCACTGGCATCCTGAGGGGGAGGACCACAGAGAGGAGGTGCTCCTCATCACACCACATGGGGGTCCATGCACCAGTGCCACTGCTTTCCAGGGCTCTTCACCTTCATCACTGGTGGAGGTGGCGTCTGCCAAGAAGCAGAAAGTTGAGGCTTAGAAGGTGCACGGCCCTACCTCTTCCGAGGTGCCCCTGCGGGCTGTCTACAGACCAGGCAGCACATGCCTGATAGCAGCTGCATAAGGAAAAGCAGGAGCCAGCTCGTGCACAGTGGCCTCAAGTGTGCACTGGGCATGTTCTCTGCCTCACCATCCCTGTGTGACAGATGAAGCTTCAAGGACCACAGAGGGCCAAGTGCAGGAGTAAGAGGCTGGCGTGCTGACAGTGGCCAAGGGCATTGGAGGGAAGGACCTGTCATCACTGGGCCAAGGAAGGAACTCCAGACTGCCTACTTCCAGAGGGCCTGCTGAGAACCCCAAAGAGCTCTCTCAACAAACACACCCACGAGTTCCAGGAGTGAGGCTGCAGGGAACAGCCTCACTCTCAGAGGGGATACAGAATTGTTCCACTGGACAAGGGCTGGGATCGTCATAGGATGCCGTTGGCCTGTGGTTTCCAACAGAGGTGCAGTTCATTGAACTGTGGTCTACAGTCCATTCTCTAACTTGGGGACCCTTGAAGAAGTGTGGAATCATGACAACAACCCTGTTGGGAGACACTATTATTCCCATCACATGGATGAGCACACGGAGGCAAAAGGAAGTTATATGATTGTCTGAGATCACCCAGTGAAGACTGTGTGGCTGGGAGTTGTCCCCAGTGTTATCTGCACGCTGCTTCCTTTTGATGCCTGGCCCTTCTTTATCAAAAGAAGCATTGGCAGAATCTGGGTGTTTATGGGTCAGCTCAAAAT</dnaseq>| | sequence = <dnaseq>AGGTGATGGGAACTGGGGGGAGCAAAGAGTGGGGAACTGGGCAGGGTCTGGCGGGGCTGTGGTGGGGGAAGCTGAAGCATGAAGGCTCGAGGAGCACACAGACACCTACACACAGCTCCGCGGGCATGTGGGGACCCAGACCCACCCCCACAGCAGACACCCCCACAGAGCACTCATGGCCCCCACAGAAATACACCCACACTCATCACAGCAAACCAAAACAATCACACGCCGGTACACAAACACACACACCCCCGCACCAATCCAGGCAGACACAAAGCTCACGGCGACAGGCAGATCTGATTCACACAGACACAGGCACAGGTGCTTCCTGATGCCACCCTCTCTTGGTCACGTGCCAGCACTTGGAGGGAGGAAAGTGCCTCACCAGGCTGAGATGCCCAAGGGACCCCCCAGGGAGGGAAAGCAGGACACACTGGGACAGTTGCTTCCAGCCCTGTCCACACCCTTGTGCCCATCAGGCCAAGCCACTGGTGAATATGCTGCAAAAAATATGCTGGAACTTCTATGAATACCACAGGGTGTGAGAAGAAAACATTAGAACTTCTATTTTGTACCTGTGTTACTCCACAACAAGAAAGCAATCAGCTTGATCAATGCCTACTGTAAAGACGGCACCGCCCTCCGGAGGTCCTTTCTCAGCCCTGGTGTTCGGACAGCCACATCCCCTCGCAGCAGGGGGAGGCCTGAAGCATAGAGGGGCCCATGCAGGTCTATTCTGTTTCAGCGAATTGCCTGGGAAATAATCCAGGATCCATTTCGTGTGGTCATCTTGTCTCCCTGGTCCCCTCCAGCCTTTCCTCATCTTTTGTGACCTGGTCACTCTGGAAGGGCGCTGGCCAGTTAGTCCACAGGATGGGCCTCCCCTGGGGCTTTTCTGATGCTTCCTTATGATGGCACTGGCATCCTGAGGGGGAGGACCACAGAGAGGAGGTGCTCCTCATCACACCACATGGGGGTCCATGCACCAGTGCCACTGCTTTCCAGGGCTCTTCACCTTCATCACTGGTGGAGGTGGCGTCTGCCAAGAAGCAGAAAGTTGAGGCTTAGAAGGTGCACGGCCCTACCTCTTCCGAGGTGCCCCTGCGGGCTGTCTACAGACCAGGCAGCACATGCCTGATAGCAGCTGCATAAGGAAAAGCAGGAGCCAGCTCGTGCACAGTGGCCTCAAGTGTGCACTGGGCATGTTCTCTGCCTCACCATCCCTGTGTGACAGATGAAGCTTCAAGGACCACAGAGGGCCAAGTGCAGGAGTAAGAGGCTGGCGTGCTGACAGTGGCCAAGGGCATTGGAGGGAAGGACCTGTCATCACTGGGCCAAGGAAGGAACTCCAGACTGCCTACTTCCAGAGGGCCTGCTGAGAACCCCAAAGAGCTCTCTCAACAAACACACCCACGAGTTCCAGGAGTGAGGCTGCAGGGAACAGCCTCACTCTCAGAGGGGATACAGAATTGTTCCACTGGACAAGGGCTGGGATCGTCATAGGATGCCGTTGGCCTGTGGTTTCCAACAGAGGTGCAGTTCATTGAACTGTGGTCTACAGTCCATTCTCTAACTTGGGGACCCTTGAAGAAGTGTGGAATCATGACAACAACCCTGTTGGGAGACACTATTATTCCCATCACATGGATGAGCACACGGAGGCAAAAGGAAGTTATATGATTGTCTGAGATCACCCAGTGAAGACTGTGTGGCTGGGAGTTGTCCCCAGTGTTATCTGCACGCTGCTTCCTTTTGATGCCTGGCCCTTCTTTATCAAAAGAAGCATTGGCAGAATCTGGGTGTTTATGGGTCAGCTCAAAAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-TPRA1-1]] | + | [[Category:Intergenic]][[Category:lnc-TPRA1-1]][[Category:NONHSAG035995]] |
Revision as of 15:04, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-TPRA1-1:4 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT091723 |
| Classification |
intergenic |
| Length |
1825 nt |
| Genomic location |
chr3-:127199555..127255808 |
| Exon number |
6 |
| Exons |
127199555..127199997,127204404..127204542,127252420..127252612,127252960..127253249,127254029..127254306,127255327..127255808 |
| Genome context |
|
| Sequence |
000001 AGGTGATGGG AACTGGGGGG AGCAAAGAGT GGGGAACTGG GCAGGGTCTG GCGGGGCTGT GGTGGGGGAA GCTGAAGCAT 000080
000081 GAAGGCTCGA GGAGCACACA GACACCTACA CACAGCTCCG CGGGCATGTG GGGACCCAGA CCCACCCCCA CAGCAGACAC 000160 000161 CCCCACAGAG CACTCATGGC CCCCACAGAA ATACACCCAC ACTCATCACA GCAAACCAAA ACAATCACAC GCCGGTACAC 000240 000241 AAACACACAC ACCCCCGCAC CAATCCAGGC AGACACAAAG CTCACGGCGA CAGGCAGATC TGATTCACAC AGACACAGGC 000320 000321 ACAGGTGCTT CCTGATGCCA CCCTCTCTTG GTCACGTGCC AGCACTTGGA GGGAGGAAAG TGCCTCACCA GGCTGAGATG 000400 000401 CCCAAGGGAC CCCCCAGGGA GGGAAAGCAG GACACACTGG GACAGTTGCT TCCAGCCCTG TCCACACCCT TGTGCCCATC 000480 000481 AGGCCAAGCC ACTGGTGAAT ATGCTGCAAA AAATATGCTG GAACTTCTAT GAATACCACA GGGTGTGAGA AGAAAACATT 000560 000561 AGAACTTCTA TTTTGTACCT GTGTTACTCC ACAACAAGAA AGCAATCAGC TTGATCAATG CCTACTGTAA AGACGGCACC 000640 000641 GCCCTCCGGA GGTCCTTTCT CAGCCCTGGT GTTCGGACAG CCACATCCCC TCGCAGCAGG GGGAGGCCTG AAGCATAGAG 000720 000721 GGGCCCATGC AGGTCTATTC TGTTTCAGCG AATTGCCTGG GAAATAATCC AGGATCCATT TCGTGTGGTC ATCTTGTCTC 000800 000801 CCTGGTCCCC TCCAGCCTTT CCTCATCTTT TGTGACCTGG TCACTCTGGA AGGGCGCTGG CCAGTTAGTC CACAGGATGG 000880 000881 GCCTCCCCTG GGGCTTTTCT GATGCTTCCT TATGATGGCA CTGGCATCCT GAGGGGGAGG ACCACAGAGA GGAGGTGCTC 000960 000961 CTCATCACAC CACATGGGGG TCCATGCACC AGTGCCACTG CTTTCCAGGG CTCTTCACCT TCATCACTGG TGGAGGTGGC 001040 001041 GTCTGCCAAG AAGCAGAAAG TTGAGGCTTA GAAGGTGCAC GGCCCTACCT CTTCCGAGGT GCCCCTGCGG GCTGTCTACA 001120 001121 GACCAGGCAG CACATGCCTG ATAGCAGCTG CATAAGGAAA AGCAGGAGCC AGCTCGTGCA CAGTGGCCTC AAGTGTGCAC 001200 001201 TGGGCATGTT CTCTGCCTCA CCATCCCTGT GTGACAGATG AAGCTTCAAG GACCACAGAG GGCCAAGTGC AGGAGTAAGA 001280 001281 GGCTGGCGTG CTGACAGTGG CCAAGGGCAT TGGAGGGAAG GACCTGTCAT CACTGGGCCA AGGAAGGAAC TCCAGACTGC 001360 001361 CTACTTCCAG AGGGCCTGCT GAGAACCCCA AAGAGCTCTC TCAACAAACA CACCCACGAG TTCCAGGAGT GAGGCTGCAG 001440 001441 GGAACAGCCT CACTCTCAGA GGGGATACAG AATTGTTCCA CTGGACAAGG GCTGGGATCG TCATAGGATG CCGTTGGCCT 001520 001521 GTGGTTTCCA ACAGAGGTGC AGTTCATTGA ACTGTGGTCT ACAGTCCATT CTCTAACTTG GGGACCCTTG AAGAAGTGTG 001600 001601 GAATCATGAC AACAACCCTG TTGGGAGACA CTATTATTCC CATCACATGG ATGAGCACAC GGAGGCAAAA GGAAGTTATA 001680 001681 TGATTGTCTG AGATCACCCA GTGAAGACTG TGTGGCTGGG AGTTGTCCCC AGTGTTATCT GCACGCTGCT TCCTTTTGAT 001760 001761 GCCTGGCCCT TCTTTATCAA AAGAAGCATT GGCAGAATCT GGGTGTTTAT GGGTCAGCTC AAAAT |