Difference between revisions of "NONHSAT027861"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>GATTCATCCCAGGCCAGGCGAGTGGAAAAGTACCAGCCGCGCGCGAGGGGCGGGGGCGCGCCGAGGGGCGGAAAAGTACAGACGGCGGAGCCGCGGGGAGAACAAAGATGATGCCACCGCTGTGTTGCGGCCGTCGAGGCCCCCTACTCCGGCAGATTTCAACCTGCTTTCACTCTTCAAAACTAGCCGGAGGTCGGCGAGCAGCTCCTTTTCGGGATGTGCTTTTTGTACGGCCATGGAAACTGGACTAGCGGAAAGGCTACCTTTTGGCCAGCAAGCCAGGCCCCTTAGAAAGAGGCCCCAGTGGGGAGCCCGGCGCTCCTAAGGCCGTTTGGGAGTCCCCAGTTTTCCACTCGCTGACACGTTGCTTCTCTTATCCCACCACCGCCGCCCCGGGCAAAGGCACTGCCTTGTCTGAATGCGGGTCTGAGGCGCTTTCTGCGGAGCCTGGTCCTTTCCCTTCAATGGTGATGTGTGTGGTCTTGCTGAGCCAGGCAACTAGGGGGACCCTTCGCTGTGGAAAAATTGGTGCTGCGGGAAAGGCAAGACTCACTCCCTTGCAGGAAACAAAGACCCCTTAGGAGAGAGAAATGTTCATGGAATGAATGAATAAACAAGTTTGACCTAAAAAAAAAAAAAAA</dnaseq>|
 
sequence = <dnaseq>GATTCATCCCAGGCCAGGCGAGTGGAAAAGTACCAGCCGCGCGCGAGGGGCGGGGGCGCGCCGAGGGGCGGAAAAGTACAGACGGCGGAGCCGCGGGGAGAACAAAGATGATGCCACCGCTGTGTTGCGGCCGTCGAGGCCCCCTACTCCGGCAGATTTCAACCTGCTTTCACTCTTCAAAACTAGCCGGAGGTCGGCGAGCAGCTCCTTTTCGGGATGTGCTTTTTGTACGGCCATGGAAACTGGACTAGCGGAAAGGCTACCTTTTGGCCAGCAAGCCAGGCCCCTTAGAAAGAGGCCCCAGTGGGGAGCCCGGCGCTCCTAAGGCCGTTTGGGAGTCCCCAGTTTTCCACTCGCTGACACGTTGCTTCTCTTATCCCACCACCGCCGCCCCGGGCAAAGGCACTGCCTTGTCTGAATGCGGGTCTGAGGCGCTTTCTGCGGAGCCTGGTCCTTTCCCTTCAATGGTGATGTGTGTGGTCTTGCTGAGCCAGGCAACTAGGGGGACCCTTCGCTGTGGAAAAATTGGTGCTGCGGGAAAGGCAAGACTCACTCCCTTGCAGGAAACAAAGACCCCTTAGGAGAGAGAAATGTTCATGGAATGAATGAATAAACAAGTTTGACCTAAAAAAAAAAAAAAA</dnaseq>|
 
}}
 
}}
[[Category:Antisense]][[Category:NONHSAG010986]]
+
[[Category:Antisense]][[Category:NONHSAG010986]][[Category:Transcripts]]

Revision as of 09:35, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT027861

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

641 nt

Genomic location

chr12+:46765246..46767561

Exon number

2

Exons

46765246..46765406,46767096..46767561

Genome context

Sequence
000001 GATTCATCCC AGGCCAGGCG AGTGGAAAAG TACCAGCCGC GCGCGAGGGG CGGGGGCGCG CCGAGGGGCG GAAAAGTACA 000080
000081 GACGGCGGAG CCGCGGGGAG AACAAAGATG ATGCCACCGC TGTGTTGCGG CCGTCGAGGC CCCCTACTCC GGCAGATTTC 000160
000161 AACCTGCTTT CACTCTTCAA AACTAGCCGG AGGTCGGCGA GCAGCTCCTT TTCGGGATGT GCTTTTTGTA CGGCCATGGA 000240
000241 AACTGGACTA GCGGAAAGGC TACCTTTTGG CCAGCAAGCC AGGCCCCTTA GAAAGAGGCC CCAGTGGGGA GCCCGGCGCT 000320
000321 CCTAAGGCCG TTTGGGAGTC CCCAGTTTTC CACTCGCTGA CACGTTGCTT CTCTTATCCC ACCACCGCCG CCCCGGGCAA 000400
000401 AGGCACTGCC TTGTCTGAAT GCGGGTCTGA GGCGCTTTCT GCGGAGCCTG GTCCTTTCCC TTCAATGGTG ATGTGTGTGG 000480
000481 TCTTGCTGAG CCAGGCAACT AGGGGGACCC TTCGCTGTGG AAAAATTGGT GCTGCGGGAA AGGCAAGACT CACTCCCTTG 000560
000561 CAGGAAACAA AGACCCCTTA GGAGAGAGAA ATGTTCATGG AATGAATGAA TAAACAAGTT TGACCTAAAA AAAAAAAAAA 000640
000641 A
[back to top]

Predicted Small Protein

Name NONHSAT027861_smProtein_107:250
Length 48
Molecular weight 5342.371
Aromaticity 0.0851063829787
Instability index 68.1765957447
Isoelectric point 11.2780151367
Runs 6
Runs residual 0.0386170212766
Runs probability 0.0227727727728
Amino acid sequence MMPPLCCGRRGPLLRQISTCFHSSKLAGGRRAAPFRDVLFVRPWKLD
Secondary structure LLLLLLLLLLLLHHHHEELLLLLLLLLLLLLLLLLLLEEEEEEEELL
PRMN -
PiMo -