Difference between revisions of "NONHSAT072579"
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sequence = <dnaseq>AAGTCTTGGACTGAGGAGCTCCAAAAAGGAAGCTGTGGCGCTGCGTAGGGAAGGAGGGAAGAAAGTAGGTCTCCGAGATGCTGCGGCTTGTGGTGCAGTCGGCCAAGATTGACCCACCACTAGCCCCACTACCCAGGCCCTGCATGTCCATCGACTTCAGAGATATCAAGAAAAGAACTCGTGTGGTGGAAGGGAATGATCCCGTGTGGAATGAGACCCTAATCTGGCACCTCTGGAACCGCCCCCTGGAAAATGACTCCTTCCTGCAAGTCACCCTTCAGGACATGGGCTCACAAAAGAAAGAAAGGTGAGGCAGAGAGAGGCAGGAGGAGCCTAGCTCCTGACCAACGCAGCAGCAAGTTATGTGATCCTTGTCTCTAATCCATAACTCACTCAGATGAA</dnaseq>| | sequence = <dnaseq>AAGTCTTGGACTGAGGAGCTCCAAAAAGGAAGCTGTGGCGCTGCGTAGGGAAGGAGGGAAGAAAGTAGGTCTCCGAGATGCTGCGGCTTGTGGTGCAGTCGGCCAAGATTGACCCACCACTAGCCCCACTACCCAGGCCCTGCATGTCCATCGACTTCAGAGATATCAAGAAAAGAACTCGTGTGGTGGAAGGGAATGATCCCGTGTGGAATGAGACCCTAATCTGGCACCTCTGGAACCGCCCCCTGGAAAATGACTCCTTCCTGCAAGTCACCCTTCAGGACATGGGCTCACAAAAGAAAGAAAGGTGAGGCAGAGAGAGGCAGGAGGAGCCTAGCTCCTGACCAACGCAGCAGCAAGTTATGTGATCCTTGTCTCTAATCCATAACTCACTCAGATGAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG028619]] | + | [[Category:Sense]][[Category:NONHSAG028619]][[Category:Transcripts]] |
Revision as of 09:54, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT072579 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
402 nt |
| Genomic location |
chr2+:97308497..97312987 |
| Exon number |
3 |
| Exons |
97308497..97308658,97312138..97312190,97312801..97312987 |
| Genome context |
|
| Sequence |
000001 AAGTCTTGGA CTGAGGAGCT CCAAAAAGGA AGCTGTGGCG CTGCGTAGGG AAGGAGGGAA GAAAGTAGGT CTCCGAGATG 000080
000081 CTGCGGCTTG TGGTGCAGTC GGCCAAGATT GACCCACCAC TAGCCCCACT ACCCAGGCCC TGCATGTCCA TCGACTTCAG 000160 000161 AGATATCAAG AAAAGAACTC GTGTGGTGGA AGGGAATGAT CCCGTGTGGA ATGAGACCCT AATCTGGCAC CTCTGGAACC 000240 000241 GCCCCCTGGA AAATGACTCC TTCCTGCAAG TCACCCTTCA GGACATGGGC TCACAAAAGA AAGAAAGGTG AGGCAGAGAG 000320 000321 AGGCAGGAGG AGCCTAGCTC CTGACCAACG CAGCAGCAAG TTATGTGATC CTTGTCTCTA ATCCATAACT CACTCAGATG 000400 000401 AA |
Predicted Small Protein
| Name | NONHSAT072579_smProtein_77:310 |
| Length | 78 |
| Molecular weight | 9068.4523 |
| Aromaticity | 0.0649350649351 |
| Instability index | 64.2597402597 |
| Isoelectric point | 9.03106689453 |
| Runs | 11 |
| Runs residual | 0.00677583286279 |
| Runs probability | 0.0494371376724 |
| Amino acid sequence | MLRLVVQSAKIDPPLAPLPRPCMSIDFRDIKKRTRVVEGNDPVWNETLIWHLWNRPLEND SFLQVTLQDMGSQKKER |
| Secondary structure | LEEEEEELLLLLLLLLLLLLLLLLLLHHHHLLLLEEEELLLLLLLHHHHHHHHLLLLLLL LEEEEEEEELLLLLLLL |
| PRMN | - |
| PiMo | - |
