Difference between revisions of "ENST00000316786.1"

Revision as of 09:54, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000316786.1
Source	Gencode19
Same with	lnc-PPP2R4-4:1
Classification	sense
Length	3145 nt
Genomic location	chr9+:132083295..132087184
Exon number	2
Exons	132083295..132083325,132084071..132087184
Genome context
Sequence	000001 AGGCAAAGCC GGGAGAAACT GCTGAGACGA GGTGGCAGCG GGGACCACGT GAGATGGCGT ATGTGGCCTT GAGCGATAAA 000080 000081 CCTCACCTGT CGGGGGAGGT GGGCGAGGAA GCCTGCAGCT CCTGGAACCC ACCACTTTTC TCTCCCAGGC CCTTGCCCAG 000160 000161 GCTGTGGCCT CTGCCTGGAA CCCCTTTTCT TCCCATCCGA GCCCTTCCCT TCAGTGCCTC TTCCTCTGGG AAGTCCTCTC 000240 000241 TGGTGCCCAG CCCGTCCTCT TCTGCCCACT CTGGGTTTCG CACCCCATGC TTAGGCCCTG ATTGCCTGCT TTGCACACAG 000320 000321 GGCTGTGAGC TCCATGAGGG CAGGAACCAC ATGGCTGTTC ACAGCTGTGT TGCCAGGGCC TGGCCTGGAG ACCCTCAGGA 000400 000401 AGTGAGACAT CTGAATCCTC TGCTCTGTGA CCCTGGCAGC CAGGTAGAGC CATCTTGGCC ATGGCACCCA GGCTTGGAGC 000480 000481 AAGCAGCAGC CTCATGGGTG GGGAACCACG TTTCCCCAGC ACATCGGCAG GCCCTAAGGG GACATTCGCT TGGCTCTGCC 000560 000561 CTCAGAGCAC TGATGCCCGG GGGACACTGC CCTTTGTGTG TCCCATGTAA GAGAGGATGC AACCTTAGAG GGGGCAGGGG 000640 000641 TAAACATGGT CCCAGGCCCT GTTGTCCCCT CCTAAGAAAG TTCCCAGTTC TGCCTGTCCA TCCCTGGCCT TTTCCCTGTG 000720 000721 CTGTCTGGGA CAGTGGGTGG AGCTGCCGCT GAGCGGTGGG ACCTAGAAAA CACATACTGA CCTATAGGAG GCACTGCCCA 000800 000801 GAGCTCCTAA CTGGGGTGGG GTGCAAAGGA AAGGTGGGTG AGGGAAGCAG AGAGAAATCA TATTAGTAGC TCACACGTCA 000880 000881 ACAGTCTAGC TGTGTGCCTG CCTCTCTCAT GCACTTCATG GGGATTATTT CCTAGAATTC CCACAAGAGC CCCTTGCAGG 000960 000961 TGGTGCGATT GTTAGCTATA ATTTGAAGAT GAGGAAACTG AGGCACAGAG TAGTTAAGCA ATGCACCCAG GAGCCCACAG 001040 001041 CTAGGGAGGA CAGAGGCTGG ATCCAGCCCA GTCCCCTGTC TCCTGGGGCC AGGCCCAGCG CTCCCACCTC TCTGATAAGG 001120 001121 ATAAAAAGGA GGGAGCGGGA AGGGAGATAT TCCAGAGGCA ACTACCATGA GACCTCCCGG CAGAGAGGCT TGAAAACATC 001200 001201 TTTTGTGTGT GGTACGCAAA CCATTTCCCC TTTGGTGTCT CTTTGAAAGA TTTTGGGAAG ATTTAAACTT TTTTTCAATG 001280 001281 ATTTGGGGAT GTCAGACTGG TGTTTTTTTG AGGGTGACAC CGTGATGAGA CTGGCCCCCA AGGCAGCCCC GTTTTACTCA 001360 001361 GGTTATGGTA ATAGAACTTC TGCAGCCTCA AAAGCAGCTT CCGCCGACTG AGCGCTCACC CCGGGGTCCG TGCTGGACTC 001440 001441 AGCCTTGACT CGGATGCCCA CCCTGAGCCC CACCCGAGAA AGGGATTATT TCATCCCTGC ATTATTTCCT TAGAGCTGAT 001520 001521 GGCAGAATCT GCTCATCTCC AAATTCGCTG TCTCCCCGTT AGGAGTGAGC TTGGTGAGGG CTCCAATCTG GTCTCCCCCG 001600 001601 TTCATTGCTG AGTCCCTGGC ACCCAGCATC AGCCCCGCAT GGAGCAGCTA GTCAATAAAG CTTTGCTGGA CACATTTCAG 001680 001681 ATGAAGAGAC TGAGGGTCAG AGAGGTCACA TGGCTTGCTT GGAAGAAACA TCAGATTTGT CTGGCTCAAG AGTCCACTTC 001760 001761 TGGCTCCCCC CTCACACAGT TGCTTAAGAG ACCCCCAGCC CAAGACAGCC TCAGAGCCTG GGTCTTCCCC CCCTCCGCCC 001840 001841 ATTCTCAGGC CCTTATACTA AAACCAGAGA GGCCTCTGAA CTGCTGTCTG CCCCCCCAAC CTTTTCCTTG CTTATCTGGG 001920 001921 AATCACGCAA AAGTTGGCCA GA

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 sequence = <dnaseq>AGGCAAAGCCGGGAGAAACTGCTGAGACGAGGTGGCAGCGGGGACCACGTGAGATGGCGTATGTGGCCTTGAGCGATAAACCTCACCTGTCGGGGGAGGTGGGCGAGGAAGCCTGCAGCTCCTGGAACCCACCACTTTTCTCTCCCAGGCCCTTGCCCAGGCTGTGGCCTCTGCCTGGAACCCCTTTTCTTCCCATCCGAGCCCTTCCCTTCAGTGCCTCTTCCTCTGGGAAGTCCTCTCTGGTGCCCAGCCCGTCCTCTTCTGCCCACTCTGGGTTTCGCACCCCATGCTTAGGCCCTGATTGCCTGCTTTGCACACAGGGCTGTGAGCTCCATGAGGGCAGGAACCACATGGCTGTTCACAGCTGTGTTGCCAGGGCCTGGCCTGGAGACCCTCAGGAAGTGAGACATCTGAATCCTCTGCTCTGTGACCCTGGCAGCCAGGTAGAGCCATCTTGGCCATGGCACCCAGGCTTGGAGCAAGCAGCAGCCTCATGGGTGGGGAACCACGTTTCCCCAGCACATCGGCAGGCCCTAAGGGGACATTCGCTTGGCTCTGCCCTCAGAGCACTGATGCCCGGGGGACACTGCCCTTTGTGTGTCCCATGTAAGAGAGGATGCAACCTTAGAGGGGGCAGGGGTAAACATGGTCCCAGGCCCTGTTGTCCCCTCCTAAGAAAGTTCCCAGTTCTGCCTGTCCATCCCTGGCCTTTTCCCTGTGCTGTCTGGGACAGTGGGTGGAGCTGCCGCTGAGCGGTGGGACCTAGAAAACACATACTGACCTATAGGAGGCACTGCCCAGAGCTCCTAACTGGGGTGGGGTGCAAAGGAAAGGTGGGTGAGGGAAGCAGAGAGAAATCATATTAGTAGCTCACACGTCAACAGTCTAGCTGTGTGCCTGCCTCTCTCATGCACTTCATGGGGATTATTTCCTAGAATTCCCACAAGAGCCCCTTGCAGGTGGTGCGATTGTTAGCTATAATTTGAAGATGAGGAAACTGAGGCACAGAGTAGTTAAGCAATGCACCCAGGAGCCCACAGCTAGGGAGGACAGAGGCTGGATCCAGCCCAGTCCCCTGTCTCCTGGGGCCAGGCCCAGCGCTCCCACCTCTCTGATAAGGATAAAAAGGAGGGAGCGGGAAGGGAGATATTCCAGAGGCAACTACCATGAGACCTCCCGGCAGAGAGGCTTGAAAACATCTTTTGTGTGTGGTACGCAAACCATTTCCCCTTTGGTGTCTCTTTGAAAGATTTTGGGAAGATTTAAACTTTTTTTCAATGATTTGGGGATGTCAGACTGGTGTTTTTTTGAGGGTGACACCGTGATGAGACTGGCCCCCAAGGCAGCCCCGTTTTACTCAGGTTATGGTAATAGAACTTCTGCAGCCTCAAAAGCAGCTTCCGCCGACTGAGCGCTCACCCCGGGGTCCGTGCTGGACTCAGCCTTGACTCGGATGCCCACCCTGAGCCCCACCCGAGAAAGGGATTATTTCATCCCTGCATTATTTCCTTAGAGCTGATGGCAGAATCTGCTCATCTCCAAATTCGCTGTCTCCCCGTTAGGAGTGAGCTTGGTGAGGGCTCCAATCTGGTCTCCCCCGTTCATTGCTGAGTCCCTGGCACCCAGCATCAGCCCCGCATGGAGCAGCTAGTCAATAAAGCTTTGCTGGACACATTTCAGATGAAGAGACTGAGGGTCAGAGAGGTCACATGGCTTGCTTGGAAGAAACATCAGATTTGTCTGGCTCAAGAGTCCACTTCTGGCTCCCCCCTCACACAGTTGCTTAAGAGACCCCCAGCCCAAGACAGCCTCAGAGCCTGGGTCTTCCCCCCCTCCGCCCATTCTCAGGCCCTTATACTAAAACCAGAGAGGCCTCTGAACTGCTGTCTGCCCCCCCAACCTTTTCCTTGCTTATCTGGGAATCACGCAAAAGTTGGCCAGAGTTAGCTCAGTCTCAGAGAAGCTGCATTCTTCTAGAGTCACTCGGTTTTGCGTGACCTGATTCAAATTTTCCATCTTTGTCACTTTGATTCCCACTCTGAGAAGTTTTCTCAGTACATATAACCTTACTATGTGATGACTGGCCTGGGTATTCATATGTGCACTTGTTACCTGTTGCTTATCTCCTGGGGGACCCCTGGTTCAGAGGGGTTTAAGCAGGTGTCCTGGTGAGACCGGGGTTATAATCAGAGACTCTCAGGGTTAGAGCTTGGCCCTGCCACTGAGTGGCCTTGGGAGTCTCATTTGACCTCTCTGAACCTTGGATTCCTCACTTGTGAAATGGGGACAGGTTGAGTTCCTGCATGGAAAGTGTCTTGCTTGATGTCTCGCCAAAAGACCAAAACTGCCGTCACTCACTGCCGGAGAGGCCCTGCACGTGGATATTAGAGTTTGCTGGGTTTTGTTTGTCCTGAGCGAATGTCCGTCCATGTACAGGCTGATGGATTTTGTAGGTGCAAGGTCCCTAACGCAATCAATCTCTCTCCTCAAAAGACCATGAGCATGCCTGGACTCAGAGAGCACCGTGTGTGGGGGGCTGGCGTGGGCACGTGTCCGCAGCTGGGACTGGCTTCTAGGGTTCTGGGCTCAGGCAGGAGGGCGGGGTCCCAGGAGGTCATCTCTCTCTCCTTACCCTGGAGCCTTTGGAATTTGGTTTCCAAATGTCCTGAATTCCTGTTCATTAATATGTGGCTCAGTACAGTGCTTGTCCCGGCAGCAGGAGCTTGGTTGGTGTTAGTCTGCTGGGGAATGGGATAAAGCAGAGAAATGTCAAGCTTTCCCTTAAAAACAAAAAACAAAAGCAAACCCTCACATCTCCCACCAATAACACACCATTGTTATCCCTGTACTTAAGACATGTTGTTGCCGGGCATGGTAGCTCACACTTGTAATCCCGACACTTTGGGAGGCTGAGGCGGGTGGGTCACCTGAGGTTGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCTCGTCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGTGCATGCCTGTAATCCCAGCTGCTGGGGAGGCTGAGGCAGGAGAATGGCTGGAACCCGGGAGGTGGAGGTTGTGGTGAGCTGAGATCGCACCATTGCCCTCCAGCCTGGGCAACAAGAGCAAAACTCTGTAAG</dnaseq>|
 }}
-[[Category:Sense]][[Category:ENSG00000179082.3]][[Category:lnc-PPP2R4-4]]
+[[Category:Sense]][[Category:ENSG00000179082.3]][[Category:lnc-PPP2R4-4]][[Category:Transcripts]]