Difference between revisions of "ENST00000412519.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>ATCAGCTGAAGTCTCACAGCCAGCGAATGGCAGGCCAGGGCACCAGGGCCTAGGTCTGCCTGCCTCTTCCATCCACCTTCTGTCATCACAAGCCTTCTGATCTCCAGCCCTCTGATCTGCCCCAGTGGGACCCTCCTGCGTCTCTGCTCTAGTTGTAGAGGACCCATCAGGCACTTAGAGAGAAATGAGTGGTGTTGTGAACATTCGACTGTGTCCATGTGGAATCCACACACACAGTTTGCCTGAAAATGACTGATAGGATGGAAACTGACAAGTCATCATCCGCTTCGGGCACCAGCGATGACTGGTTAACATGAATATTGTGTTGATTTCCGCTAGATAGAAGAAGATGTCACTTGTCGTTAATGGGGTGTCACACGTACACTTGCCTAAAGGAAAATGCTCTTTTGGTGATTGTTCTCAATTTTCACCTCATTTTATAGCCATAAAAAAGAAAAGATTCAGCAGAAAGGATGAATCCACCTAGGGGTAGGATGGAAAGGCATTCTTCTCATTTATTTCCTTCTTTCTTTACCAGAACAACCAAAACCCAGTGAAAATGCTGGTGCAAGTCAGAAGAGGGGGACCTGGGTTCTAAGAGCAGCCAGGTACTCTGGGCTTCAGATCAGAGCCTCAGAATCCAGCAGTTATGCCCACAAGGTAGCCAAAGTCCAGCCAGTACCACCGGTCTCTCGGCCAGCTATACTTGCCTCTGCTCAACAATGATGATTTGAACGTACATGTACAAATAATAACAGATAACATTACTGAGCACTTTACTATGAACTATGGAATGTGCTAGGTAAAGACGTTACTCCACGTAAGCCATAAAATCAACCTATGGGGCAGGTGCAGATCCACAAACCCTGATTTAAGAATTCTGAATCCTCAAAAGCTTTGAAAACCAAAACATTTTTTCATACGTGGTAATATGGTAAAATACTTTGGAGGAACTGGATGTATTTTTCCTCTGGTCTCCAGAGAAGAAACTGAGACGACAGCAAGTCACAGATTCAAGCTGTGTTCATAATGTGTTTCCACGTGGAGGTCACACTTTCATGTTCATGGGCAGATGAATTCTAACACCAAACACCAGGCTGAATAGGTGTTCCCATTGCAAGAGAAGTGCTGTGCACAATTTTTATTTGCATTTCAAAACCCTAACAAATGGCCACAATCAACTACTACAAATTTCTCCTAATTAGTTTTAGTCTGCACTTCTGTCACCTTTAGGAGAGAGCCAAAGATTTTAACCTTCAAAATTATCAGCAATGCATGTCAGAAAGCATTTCAAAGAAGAGTCAAAGTGCATGTAGAAACTAATTGCTGTATCTGAAAGTGCTGTTTGAAGAATTTTTCAGTCTTCAGAGAAGCAAGTTCCCCACCCCTTGGGAAAACTAGTCTTCAAACTAAAAGTTTCCCCAAATCATATACCTGAGAAAAATGTTAAAACAGACTTACCCAAAAAGGCAAAGAAATAAAACTGTAAGAATAAATAAATCAGAAATCAGATGTCTCTCCCCTGTTTAAAATCCTCCAACAGCTTCCTACTTTACTTGGAATAAAACGCAATTCCTTTACCATCA</dnaseq>| | sequence = <dnaseq>ATCAGCTGAAGTCTCACAGCCAGCGAATGGCAGGCCAGGGCACCAGGGCCTAGGTCTGCCTGCCTCTTCCATCCACCTTCTGTCATCACAAGCCTTCTGATCTCCAGCCCTCTGATCTGCCCCAGTGGGACCCTCCTGCGTCTCTGCTCTAGTTGTAGAGGACCCATCAGGCACTTAGAGAGAAATGAGTGGTGTTGTGAACATTCGACTGTGTCCATGTGGAATCCACACACACAGTTTGCCTGAAAATGACTGATAGGATGGAAACTGACAAGTCATCATCCGCTTCGGGCACCAGCGATGACTGGTTAACATGAATATTGTGTTGATTTCCGCTAGATAGAAGAAGATGTCACTTGTCGTTAATGGGGTGTCACACGTACACTTGCCTAAAGGAAAATGCTCTTTTGGTGATTGTTCTCAATTTTCACCTCATTTTATAGCCATAAAAAAGAAAAGATTCAGCAGAAAGGATGAATCCACCTAGGGGTAGGATGGAAAGGCATTCTTCTCATTTATTTCCTTCTTTCTTTACCAGAACAACCAAAACCCAGTGAAAATGCTGGTGCAAGTCAGAAGAGGGGGACCTGGGTTCTAAGAGCAGCCAGGTACTCTGGGCTTCAGATCAGAGCCTCAGAATCCAGCAGTTATGCCCACAAGGTAGCCAAAGTCCAGCCAGTACCACCGGTCTCTCGGCCAGCTATACTTGCCTCTGCTCAACAATGATGATTTGAACGTACATGTACAAATAATAACAGATAACATTACTGAGCACTTTACTATGAACTATGGAATGTGCTAGGTAAAGACGTTACTCCACGTAAGCCATAAAATCAACCTATGGGGCAGGTGCAGATCCACAAACCCTGATTTAAGAATTCTGAATCCTCAAAAGCTTTGAAAACCAAAACATTTTTTCATACGTGGTAATATGGTAAAATACTTTGGAGGAACTGGATGTATTTTTCCTCTGGTCTCCAGAGAAGAAACTGAGACGACAGCAAGTCACAGATTCAAGCTGTGTTCATAATGTGTTTCCACGTGGAGGTCACACTTTCATGTTCATGGGCAGATGAATTCTAACACCAAACACCAGGCTGAATAGGTGTTCCCATTGCAAGAGAAGTGCTGTGCACAATTTTTATTTGCATTTCAAAACCCTAACAAATGGCCACAATCAACTACTACAAATTTCTCCTAATTAGTTTTAGTCTGCACTTCTGTCACCTTTAGGAGAGAGCCAAAGATTTTAACCTTCAAAATTATCAGCAATGCATGTCAGAAAGCATTTCAAAGAAGAGTCAAAGTGCATGTAGAAACTAATTGCTGTATCTGAAAGTGCTGTTTGAAGAATTTTTCAGTCTTCAGAGAAGCAAGTTCCCCACCCCTTGGGAAAACTAGTCTTCAAACTAAAAGTTTCCCCAAATCATATACCTGAGAAAAATGTTAAAACAGACTTACCCAAAAAGGCAAAGAAATAAAACTGTAAGAATAAATAAATCAGAAATCAGATGTCTCTCCCCTGTTTAAAATCCTCCAACAGCTTCCTACTTTACTTGGAATAAAACGCAATTCCTTTACCATCA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(AS)]][[Category:ENSG00000227599.1]][[Category:lnc-SRSF6-2]] | + | [[Category:Intronic(AS)]][[Category:ENSG00000227599.1]][[Category:lnc-SRSF6-2]][[Category:Transcripts]] |
Revision as of 10:07, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
ENST00000412519.1 |
| Source |
Gencode19 |
| Same with |
lnc-SRSF6-2:1 |
| Classification |
intronic(AS) |
| Length |
1586 nt |
| Genomic location |
chr20+:41597383..41600132 |
| Exon number |
2 |
| Exons |
41597383..41598301,41599466..41600132 |
| Genome context |
|
| Sequence |
000001 ATCAGCTGAA GTCTCACAGC CAGCGAATGG CAGGCCAGGG CACCAGGGCC TAGGTCTGCC TGCCTCTTCC ATCCACCTTC 000080
000081 TGTCATCACA AGCCTTCTGA TCTCCAGCCC TCTGATCTGC CCCAGTGGGA CCCTCCTGCG TCTCTGCTCT AGTTGTAGAG 000160 000161 GACCCATCAG GCACTTAGAG AGAAATGAGT GGTGTTGTGA ACATTCGACT GTGTCCATGT GGAATCCACA CACACAGTTT 000240 000241 GCCTGAAAAT GACTGATAGG ATGGAAACTG ACAAGTCATC ATCCGCTTCG GGCACCAGCG ATGACTGGTT AACATGAATA 000320 000321 TTGTGTTGAT TTCCGCTAGA TAGAAGAAGA TGTCACTTGT CGTTAATGGG GTGTCACACG TACACTTGCC TAAAGGAAAA 000400 000401 TGCTCTTTTG GTGATTGTTC TCAATTTTCA CCTCATTTTA TAGCCATAAA AAAGAAAAGA TTCAGCAGAA AGGATGAATC 000480 000481 CACCTAGGGG TAGGATGGAA AGGCATTCTT CTCATTTATT TCCTTCTTTC TTTACCAGAA CAACCAAAAC CCAGTGAAAA 000560 000561 TGCTGGTGCA AGTCAGAAGA GGGGGACCTG GGTTCTAAGA GCAGCCAGGT ACTCTGGGCT TCAGATCAGA GCCTCAGAAT 000640 000641 CCAGCAGTTA TGCCCACAAG GTAGCCAAAG TCCAGCCAGT ACCACCGGTC TCTCGGCCAG CTATACTTGC CTCTGCTCAA 000720 000721 CAATGATGAT TTGAACGTAC ATGTACAAAT AATAACAGAT AACATTACTG AGCACTTTAC TATGAACTAT GGAATGTGCT 000800 000801 AGGTAAAGAC GTTACTCCAC GTAAGCCATA AAATCAACCT ATGGGGCAGG TGCAGATCCA CAAACCCTGA TTTAAGAATT 000880 000881 CTGAATCCTC AAAAGCTTTG AAAACCAAAA CATTTTTTCA TACGTGGTAA TATGGTAAAA TACTTTGGAG GAACTGGATG 000960 000961 TATTTTTCCT CTGGTCTCCA GAGAAGAAAC TGAGACGACA GCAAGTCACA GATTCAAGCT GTGTTCATAA TGTGTTTCCA 001040 001041 CGTGGAGGTC ACACTTTCAT GTTCATGGGC AGATGAATTC TAACACCAAA CACCAGGCTG AATAGGTGTT CCCATTGCAA 001120 001121 GAGAAGTGCT GTGCACAATT TTTATTTGCA TTTCAAAACC CTAACAAATG GCCACAATCA ACTACTACAA ATTTCTCCTA 001200 001201 ATTAGTTTTA GTCTGCACTT CTGTCACCTT TAGGAGAGAG CCAAAGATTT TAACCTTCAA AATTATCAGC AATGCATGTC 001280 001281 AGAAAGCATT TCAAAGAAGA GTCAAAGTGC ATGTAGAAAC TAATTGCTGT ATCTGAAAGT GCTGTTTGAA GAATTTTTCA 001360 001361 GTCTTCAGAG AAGCAAGTTC CCCACCCCTT GGGAAAACTA GTCTTCAAAC TAAAAGTTTC CCCAAATCAT ATACCTGAGA 001440 001441 AAAATGTTAA AACAGACTTA CCCAAAAAGG CAAAGAAATA AAACTGTAAG AATAAATAAA TCAGAAATCA GATGTCTCTC 001520 001521 CCCTGTTTAA AATCCTCCAA CAGCTTCCTA CTTTACTTGG AATAAAACGC AATTCCTTTA CCATCA |
