Difference between revisions of "ENST00000445523.1"
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sequence = <dnaseq>TTGGCCCGCGCTGCTGCTTCCTGTGTGTACTGGATGTTCTCTAGGCTCGCCCAGCGTGGAAGCCCCGAGTTACCAGCCGCAACGTGGAAACCACAGAAGGGGAAATAGATGACTTTTGGTTATCCAGATCTCTTTGAATCTTGTTCCTGTCAACTGACTTATTAGTGCCATCTCCTAATTCTGTGTCAACTTGACAAGCCTGCTGTCTTTCCCTTCATCCAAGTTGCCAATAAAAATGCTCAACAAGGCAGAGTGCTTTAGCAAGACCTGGAGAGATCTCCTACAGGGTCTCAATGGAGCCTGATGAATGAATCAATTGCATGAGTACATTCCACACATGGGAACCCAGGGATGGCTGCCATCATGCTATACAAAGTACAGATCATCACTGAACATTAGGCTGGCAGCTCTGAATGGGGCTGGCAAAGAGCAGCAGAGGTTCATGGCCTGGATTTTCTCTGATCTCATTTGTATCCTTCATCCTAAATTTAGTTTTGTTTTTTGAAATGGTTTATCTTTTAAAAACCGTATACCTGTTTTACAAGGATCTCACAAAGATTAACAATATGTATGCTATGAAGGATCCCATCTGCCTCAGAGAAGATACGCTTTTCATCACAGACTGTATACTTTTTACAGTTCTTATCTATTTATTCTACTGCAAAAACTGCCGATTCTACAGAGCCTATTAATTCCACTGGGAAAACATGTACGGAATGTGCTCATGAGTATGGGACTTCCTGTAATTGTTGGAAAGAAGAAAAAGGCTGATAGAAAAAACATTTTGGCCTGGCACTCAGGAGAAAACTTCTGCTGAGGAATGAACAGGGAAAAACAATGATGGACCACCTCAAGGAACAAATCGGATAGCTTCGACTTCCCCTCTGGAAGCCCTGCTGCGCTGGGATGCACCTATCCCTACTTCTTAGATGTTCCCATATGTTCTCAACAGCATTCTGTCCCTCCTAAGCAGTGTCACTAAAGCTAGCTGGTCTCTTAGGATTGTTACCTTTATTGATGATTTTCCCTTTGTGCTTCCTGGTGTCTGGCACCAAGACCACACCCCTACTTCTCCAATGGCCCTTTCCCTCAGTAAGCTTAGCTTATTGCTCACCTCCCACCTTCTCCCTGAACCCCAGCAGAAAGACATGGACCTGTCAGATGCTCCCGATATTTAAGTGTCTATGCCAAAATCTCATGTGGACCTTGTTTGTTCAAATGAGTTACTATTGAGAGAGACAGCAAAGTCATCTTCTTTAGGGAACCTGAAAATTGTCTTCAGTCTGAAAATTGTCTTCAGAAGGAGCAAAAGATAGGTGAGAGGGAGAGGATAAGAGGAGAGCCATGTATTCTCCTGACCATGAGCTCGCGGTAGATAAACCCCTGGTTACCTGAAGGCAGCACCGTGAGCACCATCCGCTGTGACTCATCGGATGCTTGATTAATCCACTTGCTTGGGTGTCCATGGAGCTGCCACTCTGCCACCCTACACCAGTACATTCCTGCATCCTCCATCTCCACCTGATGAAGCTTCAGGACAAAGTCTGTAGAGGATGAACGGTAACAGTGCAGGTGCCTCCTGAGCCCCTCTTCCCCATACTCCAGCAAGCCATCATGTTGCAAGTGCACCAGCAATTTACTTCCAGAGTTTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTGGCTGAGCTGCCTACACTCTCCAGGCTGCAGCGGATGGCCACTTCTCTGTGCTCAGTCACATTTTCGGTCCAGTACACTTTGGAGACACGTACCTTACTTCCTAGAAAATAAAATGGCAGTAAATTAG</dnaseq>| | sequence = <dnaseq>TTGGCCCGCGCTGCTGCTTCCTGTGTGTACTGGATGTTCTCTAGGCTCGCCCAGCGTGGAAGCCCCGAGTTACCAGCCGCAACGTGGAAACCACAGAAGGGGAAATAGATGACTTTTGGTTATCCAGATCTCTTTGAATCTTGTTCCTGTCAACTGACTTATTAGTGCCATCTCCTAATTCTGTGTCAACTTGACAAGCCTGCTGTCTTTCCCTTCATCCAAGTTGCCAATAAAAATGCTCAACAAGGCAGAGTGCTTTAGCAAGACCTGGAGAGATCTCCTACAGGGTCTCAATGGAGCCTGATGAATGAATCAATTGCATGAGTACATTCCACACATGGGAACCCAGGGATGGCTGCCATCATGCTATACAAAGTACAGATCATCACTGAACATTAGGCTGGCAGCTCTGAATGGGGCTGGCAAAGAGCAGCAGAGGTTCATGGCCTGGATTTTCTCTGATCTCATTTGTATCCTTCATCCTAAATTTAGTTTTGTTTTTTGAAATGGTTTATCTTTTAAAAACCGTATACCTGTTTTACAAGGATCTCACAAAGATTAACAATATGTATGCTATGAAGGATCCCATCTGCCTCAGAGAAGATACGCTTTTCATCACAGACTGTATACTTTTTACAGTTCTTATCTATTTATTCTACTGCAAAAACTGCCGATTCTACAGAGCCTATTAATTCCACTGGGAAAACATGTACGGAATGTGCTCATGAGTATGGGACTTCCTGTAATTGTTGGAAAGAAGAAAAAGGCTGATAGAAAAAACATTTTGGCCTGGCACTCAGGAGAAAACTTCTGCTGAGGAATGAACAGGGAAAAACAATGATGGACCACCTCAAGGAACAAATCGGATAGCTTCGACTTCCCCTCTGGAAGCCCTGCTGCGCTGGGATGCACCTATCCCTACTTCTTAGATGTTCCCATATGTTCTCAACAGCATTCTGTCCCTCCTAAGCAGTGTCACTAAAGCTAGCTGGTCTCTTAGGATTGTTACCTTTATTGATGATTTTCCCTTTGTGCTTCCTGGTGTCTGGCACCAAGACCACACCCCTACTTCTCCAATGGCCCTTTCCCTCAGTAAGCTTAGCTTATTGCTCACCTCCCACCTTCTCCCTGAACCCCAGCAGAAAGACATGGACCTGTCAGATGCTCCCGATATTTAAGTGTCTATGCCAAAATCTCATGTGGACCTTGTTTGTTCAAATGAGTTACTATTGAGAGAGACAGCAAAGTCATCTTCTTTAGGGAACCTGAAAATTGTCTTCAGTCTGAAAATTGTCTTCAGAAGGAGCAAAAGATAGGTGAGAGGGAGAGGATAAGAGGAGAGCCATGTATTCTCCTGACCATGAGCTCGCGGTAGATAAACCCCTGGTTACCTGAAGGCAGCACCGTGAGCACCATCCGCTGTGACTCATCGGATGCTTGATTAATCCACTTGCTTGGGTGTCCATGGAGCTGCCACTCTGCCACCCTACACCAGTACATTCCTGCATCCTCCATCTCCACCTGATGAAGCTTCAGGACAAAGTCTGTAGAGGATGAACGGTAACAGTGCAGGTGCCTCCTGAGCCCCTCTTCCCCATACTCCAGCAAGCCATCATGTTGCAAGTGCACCAGCAATTTACTTCCAGAGTTTTCTCTGTTCCAGTACCACATCACAGAGTACAGAGTGGCTGAGCTGCCTACACTCTCCAGGCTGCAGCGGATGGCCACTTCTCTGTGCTCAGTCACATTTTCGGTCCAGTACACTTTGGAGACACGTACCTTACTTCCTAGAAAATAAAATGGCAGTAAATTAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:lnc-TRIM45-1]][[Category:NONHSAG002543]][[Category:ENSG00000236137.1]] | + | [[Category:Antisense]][[Category:lnc-TRIM45-1]][[Category:NONHSAG002543]][[Category:ENSG00000236137.1]][[Category:Transcripts]] |
Revision as of 10:25, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000445523.1 |
| Source |
Gencode19 |
| Same with |
lnc-TRIM45-1:1,NONHSAT005462 |
| Classification |
antisense |
| Length |
1814 nt |
| Genomic location |
chr1-:117568104..117602112 |
| Exon number |
4 |
| Exons |
117568104..117569408,117574736..117574958,117592789..117592956,117601995..117602112 |
| Genome context |
|
| Sequence |
000001 TTGGCCCGCG CTGCTGCTTC CTGTGTGTAC TGGATGTTCT CTAGGCTCGC CCAGCGTGGA AGCCCCGAGT TACCAGCCGC 000080
000081 AACGTGGAAA CCACAGAAGG GGAAATAGAT GACTTTTGGT TATCCAGATC TCTTTGAATC TTGTTCCTGT CAACTGACTT 000160 000161 ATTAGTGCCA TCTCCTAATT CTGTGTCAAC TTGACAAGCC TGCTGTCTTT CCCTTCATCC AAGTTGCCAA TAAAAATGCT 000240 000241 CAACAAGGCA GAGTGCTTTA GCAAGACCTG GAGAGATCTC CTACAGGGTC TCAATGGAGC CTGATGAATG AATCAATTGC 000320 000321 ATGAGTACAT TCCACACATG GGAACCCAGG GATGGCTGCC ATCATGCTAT ACAAAGTACA GATCATCACT GAACATTAGG 000400 000401 CTGGCAGCTC TGAATGGGGC TGGCAAAGAG CAGCAGAGGT TCATGGCCTG GATTTTCTCT GATCTCATTT GTATCCTTCA 000480 000481 TCCTAAATTT AGTTTTGTTT TTTGAAATGG TTTATCTTTT AAAAACCGTA TACCTGTTTT ACAAGGATCT CACAAAGATT 000560 000561 AACAATATGT ATGCTATGAA GGATCCCATC TGCCTCAGAG AAGATACGCT TTTCATCACA GACTGTATAC TTTTTACAGT 000640 000641 TCTTATCTAT TTATTCTACT GCAAAAACTG CCGATTCTAC AGAGCCTATT AATTCCACTG GGAAAACATG TACGGAATGT 000720 000721 GCTCATGAGT ATGGGACTTC CTGTAATTGT TGGAAAGAAG AAAAAGGCTG ATAGAAAAAA CATTTTGGCC TGGCACTCAG 000800 000801 GAGAAAACTT CTGCTGAGGA ATGAACAGGG AAAAACAATG ATGGACCACC TCAAGGAACA AATCGGATAG CTTCGACTTC 000880 000881 CCCTCTGGAA GCCCTGCTGC GCTGGGATGC ACCTATCCCT ACTTCTTAGA TGTTCCCATA TGTTCTCAAC AGCATTCTGT 000960 000961 CCCTCCTAAG CAGTGTCACT AAAGCTAGCT GGTCTCTTAG GATTGTTACC TTTATTGATG ATTTTCCCTT TGTGCTTCCT 001040 001041 GGTGTCTGGC ACCAAGACCA CACCCCTACT TCTCCAATGG CCCTTTCCCT CAGTAAGCTT AGCTTATTGC TCACCTCCCA 001120 001121 CCTTCTCCCT GAACCCCAGC AGAAAGACAT GGACCTGTCA GATGCTCCCG ATATTTAAGT GTCTATGCCA AAATCTCATG 001200 001201 TGGACCTTGT TTGTTCAAAT GAGTTACTAT TGAGAGAGAC AGCAAAGTCA TCTTCTTTAG GGAACCTGAA AATTGTCTTC 001280 001281 AGTCTGAAAA TTGTCTTCAG AAGGAGCAAA AGATAGGTGA GAGGGAGAGG ATAAGAGGAG AGCCATGTAT TCTCCTGACC 001360 001361 ATGAGCTCGC GGTAGATAAA CCCCTGGTTA CCTGAAGGCA GCACCGTGAG CACCATCCGC TGTGACTCAT CGGATGCTTG 001440 001441 ATTAATCCAC TTGCTTGGGT GTCCATGGAG CTGCCACTCT GCCACCCTAC ACCAGTACAT TCCTGCATCC TCCATCTCCA 001520 001521 CCTGATGAAG CTTCAGGACA AAGTCTGTAG AGGATGAACG GTAACAGTGC AGGTGCCTCC TGAGCCCCTC TTCCCCATAC 001600 001601 TCCAGCAAGC CATCATGTTG CAAGTGCACC AGCAATTTAC TTCCAGAGTT TTCTCTGTTC CAGTACCACA TCACAGAGTA 001680 001681 CAGAGTGGCT GAGCTGCCTA CACTCTCCAG GCTGCAGCGG ATGGCCACTT CTCTGTGCTC AGTCACATTT TCGGTCCAGT 001760 001761 ACACTTTGGA GACACGTACC TTACTTCCTA GAAAATAAAA TGGCAGTAAA TTAG |
