Difference between revisions of "ENST00000472850.1"

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sequence = <dnaseq>ACCGGCTCTGTCTGGATCCTGCGACAGGGAGGCCCTGGACTGGAGCCCCTCACCTCTGCACCGCACCCCTCAGCCAGCAGCGCCTCTGCCCTGACCCTGGAGCCTGCCCTGACTCATGCCAGTGGAGTCTGTGGGGGCCATGGAGCCCCTGCCAGGTGCCCTGCAGTGGGGGGTTCAGGCTACGCTGGAGAGAGGCAGAGGCCCTCTGTGGAGGAGGCTGCCGGGAGCCATGGGCTCAAGACAGAAAGCTGCAACGGAGGGCCCTGCCCAGGTTAGAGCTGCGAGGCCCAAGACACTGTATTCACCCTGGACTGTGCCAACCAGTGCCCACACAGCTGTGCCGACCTCTGGGACCGCGTTCAGTGTCTGCAGGGACCCTGCCGCCCAGGCTGCCGCTGTCCCCCTGGCCAGCTGGTCCAGGATGGGCGCTGTGTGCCGATCTCCTCTTGCCGCTGTGGCCTCCCCAGTGCCAATGCCTCTTGGGAGCTGGCCCCGGCCCAGGCGGTGCAGCTGGACTGCCAAAACTGCACCTGTGTCAACGAGTCCCTGGTGTGCCCACACCAGGAGTGTCCAGTCCTTGGGCCTTGGTCAGCCTGGAGCAGTTGCTCGGCCCCCTGTGGTGGGGGCACTATGGAGCGACATCGGACTTGTGAGGGGGGTCCTGGGGTGGCACCATGCCAGGCCCAGGACACAGAGCAACGGCAGGAGTGTAACCTGCAGCCCTGCCCTGAGTGCCCCCCTGGCCAGGTGCTTAGTGCCTGTGCCACCTCATGCCCGTGCCTCTGCTGGCATCTGCAGCCTGGTGCCATCTGTGTGCAGGAGCCCTGCCAGCCTGGCTGTGGCTGCCCTGGAGGGCAGTGTCTGCCACGGTGGAGCCTTCAGCTGCTCCCTCGTTGACTGTCAGGGTGAGATGTGGCTGTCCATGCCCTGCTGCACCTCCAAAGTCAAGGCCCGGGACTGGCACTGAGGAGGAGAGACGGGCCCTGCTCACAGACTAGACAGAGCTTCAGAAAGCCCTCCCCTGTCTGTCCACACTGACCTCTCTCTAACTGGAGACCCAGCACCCCCTGCCGAGGGCTCCCTGGGCACTCAGTGTGGTCTGCCCCACTTGTGGGGGCATTCCCTAGCACACAGTATACACAGAGCCAGGGCTGTGATGCCAGGAAGTGGAAGGTTCTTTCCCTGCCAGTGAGGAAACTGAGGTCTGGAGGGGTGAGCGGAAATGAGGGGCCTGGCCTGGCAGCCCCCGGGCTGATAGCATTTGCCCTGTGGGGTGCAGTGTTACCCCCATCTGATCAAGACCAAGGGCCCACCCACCGTGTTCCCAGCTCTGCCACGCTGGGCTCTGTGAATGCAGACATGCAGCATGGCCAGCCTCCGGGCAGACCACCCACCCCCAGAACAGGCAGAGACAGGGCACAGTCTCTAGGTCTCTGACAGGCAGGTAGAACCCCAGAGGGTGAGACATCAGTGCTGAGAATAGAGGCCGAGTGGACAGGATTGGTCAGGGAGCCTTTTCTGGAGGAGGTGAGACCTGGCCTGGGTCCAGCTAGTGTTTGGGTGGGTGGATAAGAAAGATCAGGAGGTGTGGTTGGAGGCTGCTGTGGCTGAGAAGGCAAGATGGGGACGTGTGGGTGCTCAGCTTGGGAGGGGAGGAATCGAGGCTGGATCCAGGGCTGACCTGAAAGCTGGGTTGGATGGTCTTCCCTGGCAGAGTGCCCCCTGGGGAAACGTGGCAGCAGGTGGCCCCGGGGGAGCTGGGGCTCTGCGAGCAGACGTGCCTGGAGATGAACGCCACAAAGACCCAGAGTAACTGCAGTTCAGCTCGAGCCTCGGGCTGCGTGTGCCAGCCCGGGCACTTCCGCAGCCAGGCAGGCCCCTGCGTCCCCGAAGACCACTGCGAGTGCTGGCACCTTGGGCGTCCCCACCTGCCTGGATCTGAATGGCAGGAGGCCTGTGAGAGCTGCCTCTGCCTCAGTGGGAGGCCTGTCTGCACCCAGCACTGCTCCCCACTCACCTGTGCTCAGGGCGAGGAGATGGTGCTGGAGCCAGGGAGCTGCTGTCCCTCTTGCCGCAGGGAGGCTCCGGAGGAGCAGTCGCCCTCCTGCCAGCTCCTCACGGAGCTTCGAAACTTCACCAAAGGGACCTGTTACCTGGACCAGGTAGAAGTGAGCTACTGCAGTGGGTACTGCCCATCCAGCACCCATGTCATGCCAGAGGAGCCATACCTGCAGAGCCAGTGTGACTGCTGCAGCTACCGTCTAGACCCGGAGAGCCCTGTGCGGATCCTGAACCTGCGCTGTCTGGGTGGCCACACAGAGCCCGTGGTGCTGCCGGTCATCCACAGCTGCCAGTGCAGCTCCTGCCAGGGAGGTGACTTCTCAAAGCGCTAACAGGCTCCGCTGGGTGAGTCCACAGCTGTCCCTCTTGTGATCATGGGACTCAGCAGCACTGACCACGTCCTTCCACGCTCTCTCACCTGCCCCCAACTGGGGGCCCATGACTTGGCATTAGCATGTTCCAAATAAAGTGATACTGGCAA</dnaseq>|
 
sequence = <dnaseq>ACCGGCTCTGTCTGGATCCTGCGACAGGGAGGCCCTGGACTGGAGCCCCTCACCTCTGCACCGCACCCCTCAGCCAGCAGCGCCTCTGCCCTGACCCTGGAGCCTGCCCTGACTCATGCCAGTGGAGTCTGTGGGGGCCATGGAGCCCCTGCCAGGTGCCCTGCAGTGGGGGGTTCAGGCTACGCTGGAGAGAGGCAGAGGCCCTCTGTGGAGGAGGCTGCCGGGAGCCATGGGCTCAAGACAGAAAGCTGCAACGGAGGGCCCTGCCCAGGTTAGAGCTGCGAGGCCCAAGACACTGTATTCACCCTGGACTGTGCCAACCAGTGCCCACACAGCTGTGCCGACCTCTGGGACCGCGTTCAGTGTCTGCAGGGACCCTGCCGCCCAGGCTGCCGCTGTCCCCCTGGCCAGCTGGTCCAGGATGGGCGCTGTGTGCCGATCTCCTCTTGCCGCTGTGGCCTCCCCAGTGCCAATGCCTCTTGGGAGCTGGCCCCGGCCCAGGCGGTGCAGCTGGACTGCCAAAACTGCACCTGTGTCAACGAGTCCCTGGTGTGCCCACACCAGGAGTGTCCAGTCCTTGGGCCTTGGTCAGCCTGGAGCAGTTGCTCGGCCCCCTGTGGTGGGGGCACTATGGAGCGACATCGGACTTGTGAGGGGGGTCCTGGGGTGGCACCATGCCAGGCCCAGGACACAGAGCAACGGCAGGAGTGTAACCTGCAGCCCTGCCCTGAGTGCCCCCCTGGCCAGGTGCTTAGTGCCTGTGCCACCTCATGCCCGTGCCTCTGCTGGCATCTGCAGCCTGGTGCCATCTGTGTGCAGGAGCCCTGCCAGCCTGGCTGTGGCTGCCCTGGAGGGCAGTGTCTGCCACGGTGGAGCCTTCAGCTGCTCCCTCGTTGACTGTCAGGGTGAGATGTGGCTGTCCATGCCCTGCTGCACCTCCAAAGTCAAGGCCCGGGACTGGCACTGAGGAGGAGAGACGGGCCCTGCTCACAGACTAGACAGAGCTTCAGAAAGCCCTCCCCTGTCTGTCCACACTGACCTCTCTCTAACTGGAGACCCAGCACCCCCTGCCGAGGGCTCCCTGGGCACTCAGTGTGGTCTGCCCCACTTGTGGGGGCATTCCCTAGCACACAGTATACACAGAGCCAGGGCTGTGATGCCAGGAAGTGGAAGGTTCTTTCCCTGCCAGTGAGGAAACTGAGGTCTGGAGGGGTGAGCGGAAATGAGGGGCCTGGCCTGGCAGCCCCCGGGCTGATAGCATTTGCCCTGTGGGGTGCAGTGTTACCCCCATCTGATCAAGACCAAGGGCCCACCCACCGTGTTCCCAGCTCTGCCACGCTGGGCTCTGTGAATGCAGACATGCAGCATGGCCAGCCTCCGGGCAGACCACCCACCCCCAGAACAGGCAGAGACAGGGCACAGTCTCTAGGTCTCTGACAGGCAGGTAGAACCCCAGAGGGTGAGACATCAGTGCTGAGAATAGAGGCCGAGTGGACAGGATTGGTCAGGGAGCCTTTTCTGGAGGAGGTGAGACCTGGCCTGGGTCCAGCTAGTGTTTGGGTGGGTGGATAAGAAAGATCAGGAGGTGTGGTTGGAGGCTGCTGTGGCTGAGAAGGCAAGATGGGGACGTGTGGGTGCTCAGCTTGGGAGGGGAGGAATCGAGGCTGGATCCAGGGCTGACCTGAAAGCTGGGTTGGATGGTCTTCCCTGGCAGAGTGCCCCCTGGGGAAACGTGGCAGCAGGTGGCCCCGGGGGAGCTGGGGCTCTGCGAGCAGACGTGCCTGGAGATGAACGCCACAAAGACCCAGAGTAACTGCAGTTCAGCTCGAGCCTCGGGCTGCGTGTGCCAGCCCGGGCACTTCCGCAGCCAGGCAGGCCCCTGCGTCCCCGAAGACCACTGCGAGTGCTGGCACCTTGGGCGTCCCCACCTGCCTGGATCTGAATGGCAGGAGGCCTGTGAGAGCTGCCTCTGCCTCAGTGGGAGGCCTGTCTGCACCCAGCACTGCTCCCCACTCACCTGTGCTCAGGGCGAGGAGATGGTGCTGGAGCCAGGGAGCTGCTGTCCCTCTTGCCGCAGGGAGGCTCCGGAGGAGCAGTCGCCCTCCTGCCAGCTCCTCACGGAGCTTCGAAACTTCACCAAAGGGACCTGTTACCTGGACCAGGTAGAAGTGAGCTACTGCAGTGGGTACTGCCCATCCAGCACCCATGTCATGCCAGAGGAGCCATACCTGCAGAGCCAGTGTGACTGCTGCAGCTACCGTCTAGACCCGGAGAGCCCTGTGCGGATCCTGAACCTGCGCTGTCTGGGTGGCCACACAGAGCCCGTGGTGCTGCCGGTCATCCACAGCTGCCAGTGCAGCTCCTGCCAGGGAGGTGACTTCTCAAAGCGCTAACAGGCTCCGCTGGGTGAGTCCACAGCTGTCCCTCTTGTGATCATGGGACTCAGCAGCACTGACCACGTCCTTCCACGCTCTCTCACCTGCCCCCAACTGGGGGCCCATGACTTGGCATTAGCATGTTCCAAATAAAGTGATACTGGCAA</dnaseq>|
 
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}}
[[Category:Sense]][[Category:lnc-ZNF862-1]][[Category:NONHSAG049111]][[Category:ENSG00000197558.7]]
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[[Category:Sense]][[Category:lnc-ZNF862-1]][[Category:NONHSAG049111]][[Category:ENSG00000197558.7]][[Category:Transcripts]]

Revision as of 10:25, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000472850.1

Source

Gencode19

Same with

lnc-ZNF862-1:18,NONHSAT124063

Classification

sense

Length

2542 nt

Genomic location

chr7+:149521651..149531067

Exon number

12

Exons

149521651..149521761,149522054..149522213,149522364..149522480,149522889..149523027,149523164..149523366,149523539..149523666,149524002..149525074,149525727..149525822,149526025..149526085,149528224..149528354,149529857..149530007,149530896..149531067

Genome context

Sequence
000001 ACCGGCTCTG TCTGGATCCT GCGACAGGGA GGCCCTGGAC TGGAGCCCCT CACCTCTGCA CCGCACCCCT CAGCCAGCAG 000080
000081 CGCCTCTGCC CTGACCCTGG AGCCTGCCCT GACTCATGCC AGTGGAGTCT GTGGGGGCCA TGGAGCCCCT GCCAGGTGCC 000160
000161 CTGCAGTGGG GGGTTCAGGC TACGCTGGAG AGAGGCAGAG GCCCTCTGTG GAGGAGGCTG CCGGGAGCCA TGGGCTCAAG 000240
000241 ACAGAAAGCT GCAACGGAGG GCCCTGCCCA GGTTAGAGCT GCGAGGCCCA AGACACTGTA TTCACCCTGG ACTGTGCCAA 000320
000321 CCAGTGCCCA CACAGCTGTG CCGACCTCTG GGACCGCGTT CAGTGTCTGC AGGGACCCTG CCGCCCAGGC TGCCGCTGTC 000400
000401 CCCCTGGCCA GCTGGTCCAG GATGGGCGCT GTGTGCCGAT CTCCTCTTGC CGCTGTGGCC TCCCCAGTGC CAATGCCTCT 000480
000481 TGGGAGCTGG CCCCGGCCCA GGCGGTGCAG CTGGACTGCC AAAACTGCAC CTGTGTCAAC GAGTCCCTGG TGTGCCCACA 000560
000561 CCAGGAGTGT CCAGTCCTTG GGCCTTGGTC AGCCTGGAGC AGTTGCTCGG CCCCCTGTGG TGGGGGCACT ATGGAGCGAC 000640
000641 ATCGGACTTG TGAGGGGGGT CCTGGGGTGG CACCATGCCA GGCCCAGGAC ACAGAGCAAC GGCAGGAGTG TAACCTGCAG 000720
000721 CCCTGCCCTG AGTGCCCCCC TGGCCAGGTG CTTAGTGCCT GTGCCACCTC ATGCCCGTGC CTCTGCTGGC ATCTGCAGCC 000800
000801 TGGTGCCATC TGTGTGCAGG AGCCCTGCCA GCCTGGCTGT GGCTGCCCTG GAGGGCAGTG TCTGCCACGG TGGAGCCTTC 000880
000881 AGCTGCTCCC TCGTTGACTG TCAGGGTGAG ATGTGGCTGT CCATGCCCTG CTGCACCTCC AAAGTCAAGG CCCGGGACTG 000960
000961 GCACTGAGGA GGAGAGACGG GCCCTGCTCA CAGACTAGAC AGAGCTTCAG AAAGCCCTCC CCTGTCTGTC CACACTGACC 001040
001041 TCTCTCTAAC TGGAGACCCA GCACCCCCTG CCGAGGGCTC CCTGGGCACT CAGTGTGGTC TGCCCCACTT GTGGGGGCAT 001120
001121 TCCCTAGCAC ACAGTATACA CAGAGCCAGG GCTGTGATGC CAGGAAGTGG AAGGTTCTTT CCCTGCCAGT GAGGAAACTG 001200
001201 AGGTCTGGAG GGGTGAGCGG AAATGAGGGG CCTGGCCTGG CAGCCCCCGG GCTGATAGCA TTTGCCCTGT GGGGTGCAGT 001280
001281 GTTACCCCCA TCTGATCAAG ACCAAGGGCC CACCCACCGT GTTCCCAGCT CTGCCACGCT GGGCTCTGTG AATGCAGACA 001360
001361 TGCAGCATGG CCAGCCTCCG GGCAGACCAC CCACCCCCAG AACAGGCAGA GACAGGGCAC AGTCTCTAGG TCTCTGACAG 001440
001441 GCAGGTAGAA CCCCAGAGGG TGAGACATCA GTGCTGAGAA TAGAGGCCGA GTGGACAGGA TTGGTCAGGG AGCCTTTTCT 001520
001521 GGAGGAGGTG AGACCTGGCC TGGGTCCAGC TAGTGTTTGG GTGGGTGGAT AAGAAAGATC AGGAGGTGTG GTTGGAGGCT 001600
001601 GCTGTGGCTG AGAAGGCAAG ATGGGGACGT GTGGGTGCTC AGCTTGGGAG GGGAGGAATC GAGGCTGGAT CCAGGGCTGA 001680
001681 CCTGAAAGCT GGGTTGGATG GTCTTCCCTG GCAGAGTGCC CCCTGGGGAA ACGTGGCAGC AGGTGGCCCC GGGGGAGCTG 001760
001761 GGGCTCTGCG AGCAGACGTG CCTGGAGATG AACGCCACAA AGACCCAGAG TAACTGCAGT TCAGCTCGAG CCTCGGGCTG 001840
001841 CGTGTGCCAG CCCGGGCACT TCCGCAGCCA GGCAGGCCCC TGCGTCCCCG AAGACCACTG CGAGTGCTGG CACCTTGGGC 001920
001921 GTCCCCACCT GCCTGGATCT GAATGGCAGG AGGCCTGTGA GAGCT