Difference between revisions of "NONHSAT100124"
Line 42: | Line 42: | ||
sequence = <dnaseq>ATGCGCGGCCTGCCGGGGGCGGCCTCTTGCAGTTCCCGCCCTGACGCAGCGCGAGATTAGAGCTCCTGCTAGTCCCCAGCTGACCCTGGGCCTCAAAGGCAAGCCCTGACCTCAGTCACACGGGGTGGCGGTGATATGGTTTGGCTCTGTGTGCTTCACTCTGCCTCACTCGCCTTCCGCCTGCTGGACGCTGCCCTGTTCCCCGCAGGCGGCCGCCGTGGAGGGCAGGCACCGCGCTCCCTGGCTGCTCCCGGGGCCTTCCAAGCACAGCCACGGCCATGGGGCCGAAACCCAGACCTCGAGGGGCCTGCGGGCAGAGCTCGACAAGCCCAGCTGCTACACTGAAGGGAAAAACCTGAGGAAGCCCCTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTTGACGCTCTCTGCTCTCTCCGCTCTCCCCTGGAAATGACGAGGAACTGAGTACAGTGGACAATGGCTTCCGTGTCCCTAGCTCCCCCCGAGCCATGAGCTGCTACATCAAAAGTCTGCAGTGGGCTGCCCTTCCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCTCATTCATGCTGCAGCCTTTGCAGGAGTCAGGGATCATTATGGAGCAAGCACTGAGAAAAAACAGATTACAGCTTGGCACCGAGCAGCCAGGTTGCACCCCAGATGCTTCAGGGACATGGTGCCTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGTCTCTTCCATTTCTGGGAGCTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGATGACATGAGATGCTAATGCTTGGCCTGCGGTTGCTATTTTTAGTTCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTCACCATCCACGCGCTAAGAAGGCAGGCCCCAAAGTCTCAGCACCCAGCCGCTGGGGTCCTCGCTCTTATGGACAGAAAACTCAAGAATGAATATGTTTCCCCATCTTGTGCCCTTTTGCCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGGTAAGTTTATGTTGCAAATTTAAAGAGAGGAACCAAGAAACAGCAAGGACACTGAGCCAGGACTGAGAGTTTGGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGTGAATAGTTGGATGGAATTGCCTTTGTTCTAAAATCTTTTATTCTGCCTAAAGTCTCTGGGTCAGCAAGCACATGCCACATGGCTTCTCTCTCTGCATGGGAATGCACACCTGAGTAGGGAGGCTGGCCAGCCCGTGCTGCCCTGGTGGGGTGAGTGTTAGCTGGCTAGGGTTGCTGGAACAGAGGGGATTCAACCACAGGAATTTATTCTCTCACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGGCACTAGGGAGGACCTGTGCCCATCCTCTCCAGCTCCTGGTGGTTCCTTGGCTCGTGGCAGCACAGCTTGTACCTTCACGTGGCACTCTCCCTTTATGTGTGTGGATGTGTCCAATTTTCCTTTTCTGTTGGGGCCCCAGCCGTAGTGGCTTAGAGGCTCACCTACTCTAACAGGACCTCGTCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTTAGGACTTAAGCACAGAAGATTTGTGGGGAGGTACACAGTTCAATCCATCTGGAAGGTGGATAGCCATGGCAGGGTGGAAAGACGTGTGTGGGTATAGGCCGGAGGTGGCCTCACTGGAGAAACCTGTGCACGGCCCCACAAGGCAGCAGCTGAGCGTGGAAGGGGCTGGAGCTGCCCCGTGGTAGGGAAGGGGCCGTGTGGCCAGCAGCAGCATCTGCCTTTGTCATCACTGGGTGGGACCACGAGGGCAATGCTACTCTTCCCCTCACACCTTCTACAGGCAAGTTGGCCAGGTGTCAATGCAGCCAGGTGACACGGCCGCCTGGAGGGCAGGAGCAGACAGCCCCATGGAGGCTCTAGGAGATAGACAGGGAGGCCGCAGCTGTCCAGGAGCTGAAGTGAGCAGCAGAGGGCGCCGGGGGAGATGCGCCCTAGCACCAGGCTCTGAGTGCCCCAGCGAGCTTCCTTGCCTTGACTTTCCTCACTGGGAACCCGGGCCTGGAGTCCATATGAAGCCTCAGCCCAGGGGAGGGTCTACCTGTCCAGGAGGCTCCCACCATCCAGCTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGACAGTGCGGCCACGGGCTGTCCTCTGCTTCTCAGTGCCCAAGACAGGGAACCAGAGCACAGCACTGAACACGTTTTAGTGCTCTTTTAGTTCATGTGCTGCTTGCTGAATTTCCCTGAATTCAGAGAAGAGCCTGACGCAGAGGAAGCATCTGAGATCTTCTGTATGTTTTCTCGTCTGTGCAAAGTGTTTTCAACTCTTTCAAAGGTCGGCATTCACTGAATTTCAGCTCCCCTTGGCTTGATCTCTCATACAAAGGTTCTCAAATTCCCTGAAAATATGCAATGATTTTCTCACTCAATAAACGACTTTTCTGTCACC</dnaseq>| | sequence = <dnaseq>ATGCGCGGCCTGCCGGGGGCGGCCTCTTGCAGTTCCCGCCCTGACGCAGCGCGAGATTAGAGCTCCTGCTAGTCCCCAGCTGACCCTGGGCCTCAAAGGCAAGCCCTGACCTCAGTCACACGGGGTGGCGGTGATATGGTTTGGCTCTGTGTGCTTCACTCTGCCTCACTCGCCTTCCGCCTGCTGGACGCTGCCCTGTTCCCCGCAGGCGGCCGCCGTGGAGGGCAGGCACCGCGCTCCCTGGCTGCTCCCGGGGCCTTCCAAGCACAGCCACGGCCATGGGGCCGAAACCCAGACCTCGAGGGGCCTGCGGGCAGAGCTCGACAAGCCCAGCTGCTACACTGAAGGGAAAAACCTGAGGAAGCCCCTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTTGACGCTCTCTGCTCTCTCCGCTCTCCCCTGGAAATGACGAGGAACTGAGTACAGTGGACAATGGCTTCCGTGTCCCTAGCTCCCCCCGAGCCATGAGCTGCTACATCAAAAGTCTGCAGTGGGCTGCCCTTCCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCTCATTCATGCTGCAGCCTTTGCAGGAGTCAGGGATCATTATGGAGCAAGCACTGAGAAAAAACAGATTACAGCTTGGCACCGAGCAGCCAGGTTGCACCCCAGATGCTTCAGGGACATGGTGCCTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGTCTCTTCCATTTCTGGGAGCTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGATGACATGAGATGCTAATGCTTGGCCTGCGGTTGCTATTTTTAGTTCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTCACCATCCACGCGCTAAGAAGGCAGGCCCCAAAGTCTCAGCACCCAGCCGCTGGGGTCCTCGCTCTTATGGACAGAAAACTCAAGAATGAATATGTTTCCCCATCTTGTGCCCTTTTGCCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGGTAAGTTTATGTTGCAAATTTAAAGAGAGGAACCAAGAAACAGCAAGGACACTGAGCCAGGACTGAGAGTTTGGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGTGAATAGTTGGATGGAATTGCCTTTGTTCTAAAATCTTTTATTCTGCCTAAAGTCTCTGGGTCAGCAAGCACATGCCACATGGCTTCTCTCTCTGCATGGGAATGCACACCTGAGTAGGGAGGCTGGCCAGCCCGTGCTGCCCTGGTGGGGTGAGTGTTAGCTGGCTAGGGTTGCTGGAACAGAGGGGATTCAACCACAGGAATTTATTCTCTCACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGGCACTAGGGAGGACCTGTGCCCATCCTCTCCAGCTCCTGGTGGTTCCTTGGCTCGTGGCAGCACAGCTTGTACCTTCACGTGGCACTCTCCCTTTATGTGTGTGGATGTGTCCAATTTTCCTTTTCTGTTGGGGCCCCAGCCGTAGTGGCTTAGAGGCTCACCTACTCTAACAGGACCTCGTCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTTAGGACTTAAGCACAGAAGATTTGTGGGGAGGTACACAGTTCAATCCATCTGGAAGGTGGATAGCCATGGCAGGGTGGAAAGACGTGTGTGGGTATAGGCCGGAGGTGGCCTCACTGGAGAAACCTGTGCACGGCCCCACAAGGCAGCAGCTGAGCGTGGAAGGGGCTGGAGCTGCCCCGTGGTAGGGAAGGGGCCGTGTGGCCAGCAGCAGCATCTGCCTTTGTCATCACTGGGTGGGACCACGAGGGCAATGCTACTCTTCCCCTCACACCTTCTACAGGCAAGTTGGCCAGGTGTCAATGCAGCCAGGTGACACGGCCGCCTGGAGGGCAGGAGCAGACAGCCCCATGGAGGCTCTAGGAGATAGACAGGGAGGCCGCAGCTGTCCAGGAGCTGAAGTGAGCAGCAGAGGGCGCCGGGGGAGATGCGCCCTAGCACCAGGCTCTGAGTGCCCCAGCGAGCTTCCTTGCCTTGACTTTCCTCACTGGGAACCCGGGCCTGGAGTCCATATGAAGCCTCAGCCCAGGGGAGGGTCTACCTGTCCAGGAGGCTCCCACCATCCAGCTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGACAGTGCGGCCACGGGCTGTCCTCTGCTTCTCAGTGCCCAAGACAGGGAACCAGAGCACAGCACTGAACACGTTTTAGTGCTCTTTTAGTTCATGTGCTGCTTGCTGAATTTCCCTGAATTCAGAGAAGAGCCTGACGCAGAGGAAGCATCTGAGATCTTCTGTATGTTTTCTCGTCTGTGCAAAGTGTTTTCAACTCTTTCAAAGGTCGGCATTCACTGAATTTCAGCTCCCCTTGGCTTGATCTCTCATACAAAGGTTCTCAAATTCCCTGAAAATATGCAATGATTTTCTCACTCAATAAACGACTTTTCTGTCACC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG039707]] | + | [[Category:Intergenic]][[Category:NONHSAG039707]][[Category:Transcripts]] |
Revision as of 10:28, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100124 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3198 nt |
Genomic location |
chr5-:3417266..3536208 |
Exon number |
5 |
Exons |
3417266..3419430,3421185..3421418,3422396..3422736,3531867..3531992,3535876..3536208 |
Genome context |
|
Sequence |
000001 ATGCGCGGCC TGCCGGGGGC GGCCTCTTGC AGTTCCCGCC CTGACGCAGC GCGAGATTAG AGCTCCTGCT AGTCCCCAGC 000080 000081 TGACCCTGGG CCTCAAAGGC AAGCCCTGAC CTCAGTCACA CGGGGTGGCG GTGATATGGT TTGGCTCTGT GTGCTTCACT 000160 000161 CTGCCTCACT CGCCTTCCGC CTGCTGGACG CTGCCCTGTT CCCCGCAGGC GGCCGCCGTG GAGGGCAGGC ACCGCGCTCC 000240 000241 CTGGCTGCTC CCGGGGCCTT CCAAGCACAG CCACGGCCAT GGGGCCGAAA CCCAGACCTC GAGGGGCCTG CGGGCAGAGC 000320 000321 TCGACAAGCC CAGCTGCTAC ACTGAAGGGA AAAACCTGAG GAAGCCCCTG ACCTTCTTGA ATAACCTGGA TATTGCAGAA 000400 000401 TCATGCCTGG CACACGGCAC TGGCAGAGAC GCAGAAGGGA AAGTGTCCAG CGATGAGAGA TACCGGCCAG GGGGCAAATC 000480 000481 TTCAGCTTGC AGCACTCACT TTGCAGATCC AGTTGGAATT ATTTGTGTTG ACGCTCTCTG CTCTCTCCGC TCTCCCCTGG 000560 000561 AAATGACGAG GAACTGAGTA CAGTGGACAA TGGCTTCCGT GTCCCTAGCT CCCCCCGAGC CATGAGCTGC TACATCAAAA 000640 000641 GTCTGCAGTG GGCTGCCCTT CCCATAATAT TTCAATTTAA GCACCGACTT GCTGCTGCGG AGTCATATCT CATTCATGCT 000720 000721 GCAGCCTTTG CAGGAGTCAG GGATCATTAT GGAGCAAGCA CTGAGAAAAA ACAGATTACA GCTTGGCACC GAGCAGCCAG 000800 000801 GTTGCACCCC AGATGCTTCA GGGACATGGT GCCTGCTCTG GAGAATGGGG CAGCTTCCAC ACTGCCCAGG AGCCAGGGCT 000880 000881 TCTGACCCAG GAGCGAAAGT CTGTCTCTTC CATTTCTGGG AGCTGGCAGT ATTTGCACGA CTTTCTGGGC CTCAGGCATC 000960 000961 CCATTGCCCA CCAGGAATTA CCTTCCTCCA GGATCATGGT GAAGATGACA TGAGATGCTA ATGCTTGGCC TGCGGTTGCT 001040 001041 ATTTTTAGTT CTCCACTTTC CTGGAAAGCA TGCAGTTGAA GTTCATGACG GTATTCTCTC AACGTGTGAC TCAAAGACAG 001120 001121 AGGCCGTTTC CCATCCACCG GTTCTCACAC TGCCCCATTC TGCAGCTTCA CCATCCACGC GCTAAGAAGG CAGGCCCCAA 001200 001201 AGTCTCAGCA CCCAGCCGCT GGGGTCCTCG CTCTTATGGA CAGAAAACTC AAGAATGAAT ATGTTTCCCC ATCTTGTGCC 001280 001281 CTTTTGCCTG GAAACTATAC AGAGCAGGGG TCCCTGCTGG CATTCCTTCT CTGTACTAGT ACGGCTTCGG AAAGTACTGG 001360 001361 TTCTCTGAGG AGCGCTCAGT TGCATCTGGA AGGTGCAGTG TGCACAGCGA TGCCCCTTGA CACCAAGGTG TGAGCATTTG 001440 001441 AGCTGTGCTG GAAGGTTCTC CATGGAATAG TGCCCACCCT GGAGGGTCCT GTGCCGCGCA CTTGAGGAGG CTGTGGTGGT 001520 001521 GAGGAGAGAC TCTGGAGCAA CCCACACTCC CGATAAGTCA GATAAGAGTG CCTCCTCTAG GTAAGTTTAT GTTGCAAATT 001600 001601 TAAAGAGAGG AACCAAGAAA CAGCAAGGAC ACTGAGCCAG GACTGAGAGT TTGGGTCTTA GGTGGCTTTG GGTCATTACG 001680 001681 CCCTCTCAAG TGGATTGCTC TAAGCCCTGT TTATTTGTTA ATGTGAATAG TTGGATGGAA TTGCCTTTGT TCTAAAATCT 001760 001761 TTTATTCTGC CTAAAGTCTC TGGGTCAGCA AGCACATGCC ACATGGCTTC TCTCTCTGCA TGGGAATGCA CACCTGAGTA 001840 001841 GGGAGGCTGG CCAGCCCGTG CTGCCCTGGT GGGGTGAGTG TTAGCTGGCT AGGGTTGCTG GAACAGAGGG GATTCAACCA 001920 001921 CAGGAATTTA TTCTCTCAC |