Difference between revisions of "ENST00000383795.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>GCAGGGGAGACAATAGCGAACATGCTGTGTGGGCTCAGCCGGGAGACCCCTGGAGAGGCGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGATCAAGAAAGAAGGCAGCACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAGGGTCTCCAACCTGAGACCTGGGGGACTTGCAGCCAGGAGTGATCTGCTGAACATTGGTGACTATATTCGGTCTGTGAACGGGATCCACCTGACCAGGCTCCGCCACGATGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCGCGTGGTGCTGGAGGTGGAGTATGAGCTGCCCCCGCCCGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCTTTGGCTTTGTCCTTAGAGGAGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGTCCTGACCTACGTGCGGCCCGGTGGCCCTGCCGACAGGGAGGGCTCCCTGAAGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGACACGGTGGCTAATGCTTCGGGACCCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGGATCTCGCTCACCACCACCTCCCTCCGGAACAAGTCAGTCATTACCATCGACCGCATCAAGCCAGCCAGCGTGGTGGACAGGAGCGGAGCCCTGCACCCTGGAGACCACATCCTGTCCATCGATGGCACCAGCATGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAGAGTCAGCGGCCACTGAGGCCTCAGAGGCAGGTGGTGAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGACCCCTGCGTGCCCTCCTGCCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGCCGACCTTGAACCACGCCTTTTCCTGCAACAACCCCAGCACCCTTCCCCGTGGATCCCAGCCCATGAGTCCTCGAACTACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGAGACCACGGAGGTCGTGCTCTGTGGAGACCCCCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCTGAGAGGTGTGGGCTGCTGCAGGTGGGGGACCGTGTCCTGTCCATCAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCATCACCATCAGCTCGGCCAGCAGGAAACGAGGGGAGCCCTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGACAATATCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGTGAAGCTGAAGATCCGGAAGGACGAGGACAACTCTGATGAGCTGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGCTGAAGCGCTACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGGAGGAACCTTTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGACCGTCACACTGAAGATCAAGAAGCAACTAGACCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTGTGGAGTCTTGGGACAGCTCGGCCACCGAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGGGGCACGACCCCCCAGGAGCGGAGGCCTGGCTGGCTGAGGGGCAGCCCCCCACCCACCGAGCCCCGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCCTGTTCTAA</dnaseq>| | sequence = <dnaseq>GCAGGGGAGACAATAGCGAACATGCTGTGTGGGCTCAGCCGGGAGACCCCTGGAGAGGCGGACGATGGGCCCTACTCCAAAGGAGGCAAGGACGCAGGAGGGGCCGACGTTTCCCTGGCGTGCCGCAGACAGAGCATTCCAGAGGAGTTCCGAGGGATCACTGTGGTGGAGCTGATCAAGAAAGAAGGCAGCACGCTGGGCCTGACTATCTCAGGTGGCACCGACAAGGATGGAAAGCCCAGGGTCTCCAACCTGAGACCTGGGGGACTTGCAGCCAGGAGTGATCTGCTGAACATTGGTGACTATATTCGGTCTGTGAACGGGATCCACCTGACCAGGCTCCGCCACGATGAGATCATCACCCTGCTCAAGAATGTGGGCGAGCGCGTGGTGCTGGAGGTGGAGTATGAGCTGCCCCCGCCCGCTCCTGAGAATAACCCCAGGATCATTTCAAAGACAGTGGACGTCTCCCTCTACAAGGAGGGCAATAGCTTTGGCTTTGTCCTTAGAGGAGGTGCCCATGAAGATGGGCACAAGTCCCGCCCGCTTGTCCTGACCTACGTGCGGCCCGGTGGCCCTGCCGACAGGGAGGGCTCCCTGAAGGTGGGCGACAGGCTGCTCAGTGTCGATGGAATCCCGCTGCACGGGGCCAGCCATGCCACCGCCCTGGCCACCCTGCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCACCCCTGACACGGTGGCTAATGCTTCGGGACCCTTGATGGTGGAAATAGTCAAGACGCCAGGGTCTGCCCTGGGGATCTCGCTCACCACCACCTCCCTCCGGAACAAGTCAGTCATTACCATCGACCGCATCAAGCCAGCCAGCGTGGTGGACAGGAGCGGAGCCCTGCACCCTGGAGACCACATCCTGTCCATCGATGGCACCAGCATGGAACACTGCTCGCTGCTTGAGGCCACCAAGCTCCTGGCCAGCATTTCAGAGAAGGTGCGGCTGGAGATCCTGCCTGTGCCCCAGAGTCAGCGGCCACTGAGGCCTCAGAGGCAGGTGGTGAAAGTGCAGAGGAGTGAGCAGCTGCACCGCTGGGACCCCTGCGTGCCCTCCTGCCACAGCCCCCGGCCCGGCCACTGCAGGATGCCCACCTGGGCCACACCTGCTGGCCAGGACCAAAGCCGATCCTTGTCTTCAACTCCCTTTTCCTCGCCGACCTTGAACCACGCCTTTTCCTGCAACAACCCCAGCACCCTTCCCCGTGGATCCCAGCCCATGAGTCCTCGAACTACAATGGGGCGGAGGAGGCAGCGAAGAAGGGAACACAAGAGCTCGTTGTCGCTAGCCTCCAGCACGGTGGGGCCGGGCGGGCAGATTGTGCACACGGAGACCACGGAGGTCGTGCTCTGTGGAGACCCCCTCAGCGGCTTTGGCCTCCAGCTCCAGGGCGGCATCTTCGCCACCGAGACCCTGTCCTCCCCACCCCTCGTGTGCTTCATCGAGCCTGACAGTCCGGCTGAGAGGTGTGGGCTGCTGCAGGTGGGGGACCGTGTCCTGTCCATCAATGGCATTGCCACCGAGGACGGGACTATGGAGGAAGCCAACCAGCTCCTGCGGGACGCCGCACTGGCCCACAAGGTCGTGCTGGAGGTGGAGTTCGATGTGGCGGAGTCCGTCATCCCAAGCAGTGGCACCTTCCACGTGAAGCTGCCCAAGAAGCGCAGCGTGGAGCTGGGCATCACCATCAGCTCGGCCAGCAGGAAACGAGGGGAGCCCTTGATCATCTCCGACATCAAGAAAGGCAGCGTGGCACACAGGACGGGCACCCTGGAGCCAGGCGACAAGCTACTGGCCATTGACAATATCCGCCTGGACAACTGCCCCATGGAGGACGCCGTGCAAATCCTGCGGCAGTGCGAGGACCTGGTGAAGCTGAAGATCCGGAAGGACGAGGACAACTCTGATGAGCTGGAGACCACAGGTGCCGTCAGTTACACAGTGGAGCTGAAGCGCTACGGGGGTCCCCTGGGCATCACCATTTCGGGCACGGAGGAACCTTTTGACCCCATTGTCATCTCAGGCCTCACCAAGCGTGGCCTGGCTGAGAGGACTGGTGCCATCCACGTGGGGGACCGCATTCTGGCCATCAACAACGTTAGCCTCAAGGGCCGGCCGCTGAGCGAGGCCATCCACCTCCTGCAGGTGGCTGGAGAGACCGTCACACTGAAGATCAAGAAGCAACTAGACCGTCCCCTCCTACCCCGCAAGTCGGGCAGCCTCAGTGAGACCAGTGATGCTGATGAGGACCCAGCAGATGCCCTGAAAGGAGGCCTGCCAGCAGCCCGCTTCTCGCCGGCTGTGCCCAGTGTGGACAGTGCTGTGGAGTCTTGGGACAGCTCGGCCACCGAGGGTGGCTTTGGGGGCCCAGGGTCCTATACACCACAGGCAGCAGCCCGGGGCACGACCCCCCAGGAGCGGAGGCCTGGCTGGCTGAGGGGCAGCCCCCCACCCACCGAGCCCCGGAGGACGAGCTATACCCCAACCCCAGCTGACGAGAGCTTTCCAGAGGAGGAGGAGGAGGATGATTGGGAGCCGCCAACGAGGCATCCTGTGTCACCGCTCTCCACCCCGTCTCATCTGCCCCTGTTCTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:ENSG00000144596.7]][[Category:lnc-XPC-5]] | + | [[Category:Sense]][[Category:ENSG00000144596.7]][[Category:lnc-XPC-5]][[Category:Transcripts]] |
Revision as of 10:42, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000383795.1 |
| Source |
Gencode19 |
| Same with |
lnc-XPC-5:4 |
| Classification |
sense |
| Length |
2646 nt |
| Genomic location |
chr3-:14545413..14581836 |
| Exon number |
21 |
| Exons |
14545413..14545461,14547123..14547297,14548309..14548488,14549069..14549208,14551328..14551472,14552673..14552818,14552921..14552987,14554285..14554365,14555173..14555318,14555800..14555986,14558572..14558721,14559280..14559405,14561614..14561786,14561897..14562044,14563149..14563294,14564507..14564582,14565119..14565205,14565900..14566045,14566944..14567079,14567358..14567438,14581776..14581836 |
| Genome context |
|
| Sequence |
000001 GCAGGGGAGA CAATAGCGAA CATGCTGTGT GGGCTCAGCC GGGAGACCCC TGGAGAGGCG GACGATGGGC CCTACTCCAA 000080
000081 AGGAGGCAAG GACGCAGGAG GGGCCGACGT TTCCCTGGCG TGCCGCAGAC AGAGCATTCC AGAGGAGTTC CGAGGGATCA 000160 000161 CTGTGGTGGA GCTGATCAAG AAAGAAGGCA GCACGCTGGG CCTGACTATC TCAGGTGGCA CCGACAAGGA TGGAAAGCCC 000240 000241 AGGGTCTCCA ACCTGAGACC TGGGGGACTT GCAGCCAGGA GTGATCTGCT GAACATTGGT GACTATATTC GGTCTGTGAA 000320 000321 CGGGATCCAC CTGACCAGGC TCCGCCACGA TGAGATCATC ACCCTGCTCA AGAATGTGGG CGAGCGCGTG GTGCTGGAGG 000400 000401 TGGAGTATGA GCTGCCCCCG CCCGCTCCTG AGAATAACCC CAGGATCATT TCAAAGACAG TGGACGTCTC CCTCTACAAG 000480 000481 GAGGGCAATA GCTTTGGCTT TGTCCTTAGA GGAGGTGCCC ATGAAGATGG GCACAAGTCC CGCCCGCTTG TCCTGACCTA 000560 000561 CGTGCGGCCC GGTGGCCCTG CCGACAGGGA GGGCTCCCTG AAGGTGGGCG ACAGGCTGCT CAGTGTCGAT GGAATCCCGC 000640 000641 TGCACGGGGC CAGCCATGCC ACCGCCCTGG CCACCCTGCG GCAGTGCAGC CACGAGGCAC TCTTTCAGGT GGAGTATGAT 000720 000721 GTGGCCACCC CTGACACGGT GGCTAATGCT TCGGGACCCT TGATGGTGGA AATAGTCAAG ACGCCAGGGT CTGCCCTGGG 000800 000801 GATCTCGCTC ACCACCACCT CCCTCCGGAA CAAGTCAGTC ATTACCATCG ACCGCATCAA GCCAGCCAGC GTGGTGGACA 000880 000881 GGAGCGGAGC CCTGCACCCT GGAGACCACA TCCTGTCCAT CGATGGCACC AGCATGGAAC ACTGCTCGCT GCTTGAGGCC 000960 000961 ACCAAGCTCC TGGCCAGCAT TTCAGAGAAG GTGCGGCTGG AGATCCTGCC TGTGCCCCAG AGTCAGCGGC CACTGAGGCC 001040 001041 TCAGAGGCAG GTGGTGAAAG TGCAGAGGAG TGAGCAGCTG CACCGCTGGG ACCCCTGCGT GCCCTCCTGC CACAGCCCCC 001120 001121 GGCCCGGCCA CTGCAGGATG CCCACCTGGG CCACACCTGC TGGCCAGGAC CAAAGCCGAT CCTTGTCTTC AACTCCCTTT 001200 001201 TCCTCGCCGA CCTTGAACCA CGCCTTTTCC TGCAACAACC CCAGCACCCT TCCCCGTGGA TCCCAGCCCA TGAGTCCTCG 001280 001281 AACTACAATG GGGCGGAGGA GGCAGCGAAG AAGGGAACAC AAGAGCTCGT TGTCGCTAGC CTCCAGCACG GTGGGGCCGG 001360 001361 GCGGGCAGAT TGTGCACACG GAGACCACGG AGGTCGTGCT CTGTGGAGAC CCCCTCAGCG GCTTTGGCCT CCAGCTCCAG 001440 001441 GGCGGCATCT TCGCCACCGA GACCCTGTCC TCCCCACCCC TCGTGTGCTT CATCGAGCCT GACAGTCCGG CTGAGAGGTG 001520 001521 TGGGCTGCTG CAGGTGGGGG ACCGTGTCCT GTCCATCAAT GGCATTGCCA CCGAGGACGG GACTATGGAG GAAGCCAACC 001600 001601 AGCTCCTGCG GGACGCCGCA CTGGCCCACA AGGTCGTGCT GGAGGTGGAG TTCGATGTGG CGGAGTCCGT CATCCCAAGC 001680 001681 AGTGGCACCT TCCACGTGAA GCTGCCCAAG AAGCGCAGCG TGGAGCTGGG CATCACCATC AGCTCGGCCA GCAGGAAACG 001760 001761 AGGGGAGCCC TTGATCATCT CCGACATCAA GAAAGGCAGC GTGGCACACA GGACGGGCAC CCTGGAGCCA GGCGACAAGC 001840 001841 TACTGGCCAT TGACAATATC CGCCTGGACA ACTGCCCCAT GGAGGACGCC GTGCAAATCC TGCGGCAGTG CGAGGACCTG 001920 001921 GTGAAGCTGA AGATCCGGAA GGACGAGGAC AACTCTGATG AGCTGGAGAC CACAGGTGCC GTCAGTTACA CAGTGGAGCT 002000 002001 GAAGCGCTAC GGGGGTCCCC TGGGCATCAC CATTTCGGGC ACGGAGGAAC CTTTTGACCC CATTGTCATC TCAGGCCTCA 002080 002081 CCAAGCGTGG CCTGGCTGAG AGGACTGGTG CCATCCACGT GGGGGACCGC ATTCTGGCCA TCAACAACGT TAGCCTCAAG 002160 002161 GGCCGGCCGC TGAGCGAGGC CATCCACCTC CTGCAGGTGG CTGGAGAGAC CGTCACACTG AAGATCAAGA AGCAACTAGA 002240 002241 CCGTCCCCTC CTACCCCGCA AGTCGGGCAG CCTCAGTGAG ACCAGTGATG CTGATGAGGA CCCAGCAGAT GCCCTGAAAG 002320 002321 GAGGCCTGCC AGCAGCCCGC TTCTCGCCGG CTGTGCCCAG TGTGGACAGT GCTGTGGAGT CTTGGGACAG CTCGGCCACC 002400 002401 GAGGGTGGCT TTGGGGGCCC AGGGTCCTAT ACACCACAGG CAGCAGCCCG GGGCACGACC CCCCAGGAGC GGAGGCCTGG 002480 002481 CTGGCTGAGG GGCAGCCCCC CACCCACCGA GCCCCGGAGG ACGAGCTATA CCCCAACCCC AGCTGACGAG AGCTTTCCAG 002560 002561 AGGAGGAGGA GGAGGATGAT TGGGAGCCGC CAACGAGGCA TCCTGTGTCA CCGCTCTCCA CCCCGTCTCA TCTGCCCCTG 002640 002641 TTCTAA |
