Difference between revisions of "NONHSAT091477"
| Line 42: | Line 42: | ||
sequence = <dnaseq>AGCAGCTCAGTTTCTCACTCCGAAGTGGCAGCAGCCAGAGAGGGAGTCGGTGTGGACGCGAGGAGCCGGGCGCTTAGAACAGAGGCTTGCACAGGTGGAGATGTGGAAGTCTGTAGTGGGCCATGATGTGTCTGTTTCCGTGGAGACCCAGGGTGATGATTGGGACACAGATCCTGACTTTGTGAATGACATCTCTGAAAAGGAGCAACGATGGGGAGCCAAGACCATCGAGGGGTCTGGACGCACAGAACACATCAAGTAGGTGCCGAAAGGACTGGAGAAAAGGAAGGGGGTTATGGGAAGAGCCCAAAGAAAACTCGGAGACTTGGGGGAAGGTGAGGGAGGAAAAGGATAGGGTAGTTCATGTCTATGTATTATTGTGTTTGTTTTTTTTCTAGAGTCTGTTCCTGTGTGTACCTGTGTGTCATTGCATATTTCCATTTTATGTCTCTCCTCTTACCCTCCTCAACCCTATTATCTATCTTTTATACCTAACAACTCTGCTATTTCCCCAAGTGGGTCTATTGGATTAACTGCCTCCCTTCCTTTAGTAAGGCATGAGAGATTCATAGAGGAAGTGGACCAAATACTAAGGTCctctctatctatctacctggcaatcatctatctcctatctatctCTTCA</dnaseq>| | sequence = <dnaseq>AGCAGCTCAGTTTCTCACTCCGAAGTGGCAGCAGCCAGAGAGGGAGTCGGTGTGGACGCGAGGAGCCGGGCGCTTAGAACAGAGGCTTGCACAGGTGGAGATGTGGAAGTCTGTAGTGGGCCATGATGTGTCTGTTTCCGTGGAGACCCAGGGTGATGATTGGGACACAGATCCTGACTTTGTGAATGACATCTCTGAAAAGGAGCAACGATGGGGAGCCAAGACCATCGAGGGGTCTGGACGCACAGAACACATCAAGTAGGTGCCGAAAGGACTGGAGAAAAGGAAGGGGGTTATGGGAAGAGCCCAAAGAAAACTCGGAGACTTGGGGGAAGGTGAGGGAGGAAAAGGATAGGGTAGTTCATGTCTATGTATTATTGTGTTTGTTTTTTTTCTAGAGTCTGTTCCTGTGTGTACCTGTGTGTCATTGCATATTTCCATTTTATGTCTCTCCTCTTACCCTCCTCAACCCTATTATCTATCTTTTATACCTAACAACTCTGCTATTTCCCCAAGTGGGTCTATTGGATTAACTGCCTCCCTTCCTTTAGTAAGGCATGAGAGATTCATAGAGGAAGTGGACCAAATACTAAGGTCctctctatctatctacctggcaatcatctatctcctatctatctCTTCA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG035885]] | + | [[Category:Sense]][[Category:NONHSAG035885]][[Category:Transcripts]] |
Revision as of 10:46, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT091477 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
646 nt |
| Genomic location |
chr3-:121375738..121379766 |
| Exon number |
3 |
| Exons |
121375738..121376199,121377111..121377194,121379667..121379766 |
| Genome context |
|
| Sequence |
000001 AGCAGCTCAG TTTCTCACTC CGAAGTGGCA GCAGCCAGAG AGGGAGTCGG TGTGGACGCG AGGAGCCGGG CGCTTAGAAC 000080
000081 AGAGGCTTGC ACAGGTGGAG ATGTGGAAGT CTGTAGTGGG CCATGATGTG TCTGTTTCCG TGGAGACCCA GGGTGATGAT 000160 000161 TGGGACACAG ATCCTGACTT TGTGAATGAC ATCTCTGAAA AGGAGCAACG ATGGGGAGCC AAGACCATCG AGGGGTCTGG 000240 000241 ACGCACAGAA CACATCAAGT AGGTGCCGAA AGGACTGGAG AAAAGGAAGG GGGTTATGGG AAGAGCCCAA AGAAAACTCG 000320 000321 GAGACTTGGG GGAAGGTGAG GGAGGAAAAG GATAGGGTAG TTCATGTCTA TGTATTATTG TGTTTGTTTT TTTTCTAGAG 000400 000401 TCTGTTCCTG TGTGTACCTG TGTGTCATTG CATATTTCCA TTTTATGTCT CTCCTCTTAC CCTCCTCAAC CCTATTATCT 000480 000481 ATCTTTTATA CCTAACAACT CTGCTATTTC CCCAAGTGGG TCTATTGGAT TAACTGCCTC CCTTCCTTTA GTAAGGCATG 000560 000561 AGAGATTCAT AGAGGAAGTG GACCAAATAC TAAGGTCctc tctatctatc tacctggcaa tcatctatct cctatctatc 000640 000641 tCTTCA |
Predicted Small Protein
| Name | NONHSAT091477_smProtein_185:397 |
| Length | 71 |
| Molecular weight | 8313.3065 |
| Aromaticity | 0.1 |
| Instability index | 41.4128571429 |
| Isoelectric point | 9.44012451172 |
| Runs | 9 |
| Runs residual | 0.0162659123055 |
| Runs probability | 0.0324638363854 |
| Amino acid sequence | MTSLKRSNDGEPRPSRGLDAQNTSSRCRKDWRKGRGLWEEPKENSETWGKVREEKDRVVH VYVLLCLFFF |
| Secondary structure | LLLLEELLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLLLLEEEELLLLEEE EEEEEEEEEL |
| PRMN | - |
| PiMo | - |
