Difference between revisions of "ENST00000452640.1"

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sequence = <dnaseq>CAAAGGAGGAGACCCAGGACTCGCTGTATCCGAGCCCCGAGCTTGGGAATCTCTCAAGCACCCTGCATGTGTTCCACAAATCTGGGGAACCTAAACCCTCATGGTTCCCGAGGCAGAGATGGCTGGCAGTCATCAGCACAGGACCAAGACTGCACCCCACTCCTTCCATTTGGGAGTAGAATATGATGACGTGACCTTAGAAGATGGCAGAGCCACACAATAGAAGGCGTTTGGGTTCCTGAATCACTGTATGAACAGAGCCACCCACAGAATATGAACATCCTCCCTGGACTGTCATAATGAGTGAGGAAAAAACTTTACTGTGTTTGAGCCTTTATATATTTGGGGTCTATTCACTACTGCAGCTAGTGTTACCTTGAGTCATTGGTGCCTTGAATTACAGAACTGCCACAACGAAATTCTAAAATATGTTAGCAGTTGAGCAAGAGGGATCATGGAACTGTTCGAGCTGGAAAATGGTTATCTATGTTATGCAGTGGCAAAACATTGGGTAAATCTGTTGCATGTTGTTATGGACTGAATGTTTGTGGTCTCCCCTAAATTCATATGTTGAATCCTAACCCTCGAAGTAGTAGTGTCAGGAGGTGGGGCCTTTGGGAGGTGACTAGGTTGTGAGGGTGGAGCCCTCATGGATGGGGTTAGTGCCATTATAAAAGAGGCCCCAGAGAGCTGCCTTGCCCTCTTTCTACCATGTGAGGACAGAGTGAGAAGGATCCATCTATAAATCAGAAACAGGGCCCTCCACAGATATAGGTACTGCCTGTGTCATCTTCTTGGACTTCCTGGTATCTAGAACTGTGAGAAATAAATTCCTGTTCTTTGTAAGCCA</dnaseq>|
 
sequence = <dnaseq>CAAAGGAGGAGACCCAGGACTCGCTGTATCCGAGCCCCGAGCTTGGGAATCTCTCAAGCACCCTGCATGTGTTCCACAAATCTGGGGAACCTAAACCCTCATGGTTCCCGAGGCAGAGATGGCTGGCAGTCATCAGCACAGGACCAAGACTGCACCCCACTCCTTCCATTTGGGAGTAGAATATGATGACGTGACCTTAGAAGATGGCAGAGCCACACAATAGAAGGCGTTTGGGTTCCTGAATCACTGTATGAACAGAGCCACCCACAGAATATGAACATCCTCCCTGGACTGTCATAATGAGTGAGGAAAAAACTTTACTGTGTTTGAGCCTTTATATATTTGGGGTCTATTCACTACTGCAGCTAGTGTTACCTTGAGTCATTGGTGCCTTGAATTACAGAACTGCCACAACGAAATTCTAAAATATGTTAGCAGTTGAGCAAGAGGGATCATGGAACTGTTCGAGCTGGAAAATGGTTATCTATGTTATGCAGTGGCAAAACATTGGGTAAATCTGTTGCATGTTGTTATGGACTGAATGTTTGTGGTCTCCCCTAAATTCATATGTTGAATCCTAACCCTCGAAGTAGTAGTGTCAGGAGGTGGGGCCTTTGGGAGGTGACTAGGTTGTGAGGGTGGAGCCCTCATGGATGGGGTTAGTGCCATTATAAAAGAGGCCCCAGAGAGCTGCCTTGCCCTCTTTCTACCATGTGAGGACAGAGTGAGAAGGATCCATCTATAAATCAGAAACAGGGCCCTCCACAGATATAGGTACTGCCTGTGTCATCTTCTTGGACTTCCTGGTATCTAGAACTGTGAGAAATAAATTCCTGTTCTTTGTAAGCCA</dnaseq>|
 
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[[Category:Antisense]][[Category:lnc-C1orf198-3]][[Category:NONHSAG004594]][[Category:ENSG00000244137.1]]
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[[Category:Antisense]][[Category:lnc-C1orf198-3]][[Category:NONHSAG004594]][[Category:ENSG00000244137.1]][[Category:Transcripts]]

Revision as of 11:18, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000452640.1

Source

Gencode19

Same with

lnc-C1orf198-3:2,NONHSAT010136

Classification

antisense

Length

850 nt

Genomic location

chr1-:230911827..230930899

Exon number

3

Exons

230911827..230912494,230912596..230912736,230930859..230930899

Genome context

Sequence
000001 CAAAGGAGGA GACCCAGGAC TCGCTGTATC CGAGCCCCGA GCTTGGGAAT CTCTCAAGCA CCCTGCATGT GTTCCACAAA 000080
000081 TCTGGGGAAC CTAAACCCTC ATGGTTCCCG AGGCAGAGAT GGCTGGCAGT CATCAGCACA GGACCAAGAC TGCACCCCAC 000160
000161 TCCTTCCATT TGGGAGTAGA ATATGATGAC GTGACCTTAG AAGATGGCAG AGCCACACAA TAGAAGGCGT TTGGGTTCCT 000240
000241 GAATCACTGT ATGAACAGAG CCACCCACAG AATATGAACA TCCTCCCTGG ACTGTCATAA TGAGTGAGGA AAAAACTTTA 000320
000321 CTGTGTTTGA GCCTTTATAT ATTTGGGGTC TATTCACTAC TGCAGCTAGT GTTACCTTGA GTCATTGGTG CCTTGAATTA 000400
000401 CAGAACTGCC ACAACGAAAT TCTAAAATAT GTTAGCAGTT GAGCAAGAGG GATCATGGAA CTGTTCGAGC TGGAAAATGG 000480
000481 TTATCTATGT TATGCAGTGG CAAAACATTG GGTAAATCTG TTGCATGTTG TTATGGACTG AATGTTTGTG GTCTCCCCTA 000560
000561 AATTCATATG TTGAATCCTA ACCCTCGAAG TAGTAGTGTC AGGAGGTGGG GCCTTTGGGA GGTGACTAGG TTGTGAGGGT 000640
000641 GGAGCCCTCA TGGATGGGGT TAGTGCCATT ATAAAAGAGG CCCCAGAGAG CTGCCTTGCC CTCTTTCTAC CATGTGAGGA 000720
000721 CAGAGTGAGA AGGATCCATC TATAAATCAG AAACAGGGCC CTCCACAGAT ATAGGTACTG CCTGTGTCAT CTTCTTGGAC 000800
000801 TTCCTGGTAT CTAGAACTGT GAGAAATAAA TTCCTGTTCT TTGTAAGCCA
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