Difference between revisions of "NONHSAT036319"
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sequence = <dnaseq>TTACACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCatagtggaagactgagcctctataaaaaatgaacgaggacactcttaatggacagatacaaaacaagccccaggagaaaGGTGTTGTTATGTCCAAagccatcttgccatgcgcagcctgagaatggagccaatgactgagggtggcagagcagaaagatgAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCaggttgctactcccagctcctgtcttcacatctgcataccaaccagtaagaagaggagaaggagcaaggagagcacataactttccttttaaggacacaactagatgccatgttgtgagctgctctgtggagggggacctgtggcgaggaactgagggcagccagcaggcaacagccagctgccatgttgtgagtagccctatggaggggcccacatggcaaggaactgac</dnaseq>| | sequence = <dnaseq>TTACACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCatagtggaagactgagcctctataaaaaatgaacgaggacactcttaatggacagatacaaaacaagccccaggagaaaGGTGTTGTTATGTCCAAagccatcttgccatgcgcagcctgagaatggagccaatgactgagggtggcagagcagaaagatgAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCaggttgctactcccagctcctgtcttcacatctgcataccaaccagtaagaagaggagaaggagcaaggagagcacataactttccttttaaggacacaactagatgccatgttgtgagctgctctgtggagggggacctgtggcgaggaactgagggcagccagcaggcaacagccagctgccatgttgtgagtagccctatggaggggcccacatggcaaggaactgac</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Overlapping(S)]][[Category:NONHSAG014666]] | + | [[Category:Overlapping(S)]][[Category:NONHSAG014666]][[Category:Transcripts]] |
Revision as of 11:33, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT036319 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
overlapping(S) |
| Length |
575 nt |
| Genomic location |
chr14-:34454587..34931980 |
| Exon number |
5 |
| Exons |
34454587..34454713,34456218..34456368,34561527..34561608,34638697..34638852,34931922..34931980 |
| Genome context |
|
| Sequence |
000001 TTACACGGAT CACGACTTGA TTAATGCTTG TCTCCCAGCT AGGCCGCCAG CTGCACAAGC AGCTACCAGG AGGCAGCCTG 000080
000081 AACGTGTCAG GGCCTGGGCA CGACACTTGC CTTTCTTGGA GGAGTGATTT GAAGCCatag tggaagactg agcctctata 000160 000161 aaaaatgaac gaggacactc ttaatggaca gatacaaaac aagccccagg agaaaGGTGT TGTTATGTCC AAagccatct 000240 000241 tgccatgcgc agcctgagaa tggagccaat gactgagggt ggcagagcag aaagatgAGA TAAATGGTAC GAGGCTGATA 000320 000321 TGGGAGCATC CATCACTGAC TACCaggttg ctactcccag ctcctgtctt cacatctgca taccaaccag taagaagagg 000400 000401 agaaggagca aggagagcac ataactttcc ttttaaggac acaactagat gccatgttgt gagctgctct gtggaggggg 000480 000481 acctgtggcg aggaactgag ggcagccagc aggcaacagc cagctgccat gttgtgagta gccctatgga ggggcccaca 000560 000561 tggcaaggaa ctgac |
Predicted Small Protein
| Name | NONHSAT036319_smProtein_23:139 |
| Length | 39 |
| Molecular weight | 4113.6814 |
| Aromaticity | 0.0263157894737 |
| Instability index | 49.1 |
| Isoelectric point | 9.30267333984 |
| Runs | 7 |
| Runs residual | 0.0115997229917 |
| Runs probability | 0.0437580437581 |
| Amino acid sequence | MLVSQLGRQLHKQLPGGSLNVSGPGHDTCLSWRSDLKP |
| Secondary structure | LHHHHHHHHHHHHLLLLLEELLLLLLLLLLLEEELLLL |
| PRMN | - |
| PiMo | - |
