Difference between revisions of "NONHSAT013827"

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sequence = <dnaseq>AATCGGGCTCGATGAGGAAGACGTGAGTCAGAGCTTGCGCCTCTCGCTTCCAGCTGTGGGTGGCGCTAGGCAGCTTCAGCCGGACCGGGTAGGGGTCCTCGCTCGCTAGCTTGCTGTTTCTCGGAGAAGCTCCCGAGTGTCCGGCCTAGAGGCCATGAGAAGGCAGTGGGGGTCTGCCATGAGGGCGGCCGAGCAGGCGGGCTGCATGGAGTGTGGCCATCTGGGGCCGTGTGGTATTTGCCACTCAGGAGACATGTCCCTATGACATAGCAGTGGTGAGCCTGGAGGAGGACCTGGATGATGTCCCCATCCCTGTGCCCGCTGAGCACTTCCATGAAGGCGAGGCTGTGAGTGTGGTGGGCTTTGGCGTCTTTGGCCAGTCTTGCGGGCCCTCGGTGACCTCAGGCATCCTTTCGGCTGTGGTGCAGGCATAATCACCAGCAACACCCGGGACAATAATACGGGGGCCACCTACCCCCACCTGAACTTCAGCATTCCCATCACGGTGCTCCAGCCGGCCCTGCAGCAGTACAGCCAGACCCAAGACCTAGGTGGCCTCCGTGAGCTGGACCGCGCTGCTGAGCCAGTCAGGGTGGTGTGGCGGTTGCAGCGGCCCCTGGCAGAGGCCCCGCGGAGCAAGCTCTGAGGCTGTGTTACCACCTTTGGAAAGAAGAGTGACCTTTTTCTGCTGTAGGAAGTGATGTTGAGGTGACGGTGGCCTCAGGATTCAGGGCCCAGCCCCTGCAGGGGCCCAGGCTGCCTCTCATCTCCACCCACTGACTGCAGACTGGGCTTTGGGCTCTGGGGCAAACTTCTCTTCAGCCCCATGGATCCTTAACCTGGCAGCCCGTTTTGGGGTGCTTTCTTGAGCCCCCAGTTCTCTGTCCCCTAGCACTAGACTCAGCTGTATTGTTTTTCCTTCTGGGGAGCCCACTCCAACTGCACAGAAGTTCTGGGCCTGACAGGTAGATTCCAGCTGGAAGGCAGGCCCGTGCCTGGTTTTGCGTCTGTTCCCCTGAGGGCCATCGTCATCCTGGAGCTTCAATGGGGCCTTGGCTCCTGTCTGCCTCTCAGTCAGAGTCAGGGCTGACAAAGGACTCAGCTTCCTTAGCATCTCAGCAGAAACCTTGCTCTGAAGACCAGAGACAGAAGGGACAGAAACAGGAGTGCCTCCTGCTGTGCCAGGCCCATGGGCAGTGCAGGCAGATCCCTGAAGGTCAGCACTCCTGGGTCTTCATATGCCAACAGGGGCGCTCTTGACACTGTGCCTTCATTTTCCAGCCCACAGCCTGGGTCTCAGGGATCTTGAGGGGTAGAACATGTCTGGTTGGGGCTTGGGAATAAACATGATCTATTGAAAAACCTCTGTATTTATATATCAAATTGTTTCTTTTTTTCAGGAGTTGAACTGGGAATAGGCAAGTACCAGGCAAAGAAACACACCCtttccttttttttttttttttttctttagagctgtggtcttgctctctcacccaggctggagtgcagtgttgcgatcacagctcactgcagcctcaaactcctgggctccaggagacctcctgcctcagcctcctgaatagctgggactacagtcgcgcaccaccacgcctggctaattttttatttttgtagaaatggggtattgctttgttgcccgtgctggcttcagccttctggtttcaagcagtcctcctgcctcagcttcccaaagtgctgggattacaggtgtgagccactgtgcccaaccCAGAAATACACCCTTTCTGTGCTGTTTTCTCAGCAGGGTGTGAGCTCACGGGATACGGTCCTGCCAGACTGGCCCTCATAGCTGGTCATGTGCCAGTCAGAGCTGGGTGGGGCTTGCAGGTCCCGGAAGGTGGTGGTCTTGACCTGGCAGCAGATGCTTAAAGAATGCCTAAGGTGGGTGGCAGTTGGGGAGTTCAAGGGTGAATGAGGCCAGGGCAGCCCCCAGGAGCTGAGGCCAACTCTTTGAGTCAGGACTGTGCCGTGTGCCCAGGGCCTTGCATGTGTGGGCCCTCGAGTGATTTCTACTGGCAGGCTGAAAGCCCTGTGAGGGGCGGCTGTGGGCGGAGGCCACGCAGGAAGAGTGCTTAGGAGTAACTTGTTTCTAACACCTGTGTGCTGAGTGCCAATGCTGGGtgtggtgttatgatatatattggttttcatccagcattcctgactcgtaactctcatagtccttgttccagtctttgttagaatactgggtatgttagggcttgggacaggcctctgacctctgggtatcctttcactaatgttcgcccacctttttcacagtgggtcctaaagaccttcccatgagagggtctcaatcctaggggaaggaatgttgATGTCatgaaccttccataaaaacccaagaggacagggttcagagagcttctggatagctgaacacctggcacttcctggagtgtggcgtgcccagggagggcacggaagctctgcactccttccccttccctcattccttgctctatgtgcatctcttcatctgtatcctttgcgatatcctttataataaaccggtaaacataa</dnaseq>|
 
sequence = <dnaseq>AATCGGGCTCGATGAGGAAGACGTGAGTCAGAGCTTGCGCCTCTCGCTTCCAGCTGTGGGTGGCGCTAGGCAGCTTCAGCCGGACCGGGTAGGGGTCCTCGCTCGCTAGCTTGCTGTTTCTCGGAGAAGCTCCCGAGTGTCCGGCCTAGAGGCCATGAGAAGGCAGTGGGGGTCTGCCATGAGGGCGGCCGAGCAGGCGGGCTGCATGGAGTGTGGCCATCTGGGGCCGTGTGGTATTTGCCACTCAGGAGACATGTCCCTATGACATAGCAGTGGTGAGCCTGGAGGAGGACCTGGATGATGTCCCCATCCCTGTGCCCGCTGAGCACTTCCATGAAGGCGAGGCTGTGAGTGTGGTGGGCTTTGGCGTCTTTGGCCAGTCTTGCGGGCCCTCGGTGACCTCAGGCATCCTTTCGGCTGTGGTGCAGGCATAATCACCAGCAACACCCGGGACAATAATACGGGGGCCACCTACCCCCACCTGAACTTCAGCATTCCCATCACGGTGCTCCAGCCGGCCCTGCAGCAGTACAGCCAGACCCAAGACCTAGGTGGCCTCCGTGAGCTGGACCGCGCTGCTGAGCCAGTCAGGGTGGTGTGGCGGTTGCAGCGGCCCCTGGCAGAGGCCCCGCGGAGCAAGCTCTGAGGCTGTGTTACCACCTTTGGAAAGAAGAGTGACCTTTTTCTGCTGTAGGAAGTGATGTTGAGGTGACGGTGGCCTCAGGATTCAGGGCCCAGCCCCTGCAGGGGCCCAGGCTGCCTCTCATCTCCACCCACTGACTGCAGACTGGGCTTTGGGCTCTGGGGCAAACTTCTCTTCAGCCCCATGGATCCTTAACCTGGCAGCCCGTTTTGGGGTGCTTTCTTGAGCCCCCAGTTCTCTGTCCCCTAGCACTAGACTCAGCTGTATTGTTTTTCCTTCTGGGGAGCCCACTCCAACTGCACAGAAGTTCTGGGCCTGACAGGTAGATTCCAGCTGGAAGGCAGGCCCGTGCCTGGTTTTGCGTCTGTTCCCCTGAGGGCCATCGTCATCCTGGAGCTTCAATGGGGCCTTGGCTCCTGTCTGCCTCTCAGTCAGAGTCAGGGCTGACAAAGGACTCAGCTTCCTTAGCATCTCAGCAGAAACCTTGCTCTGAAGACCAGAGACAGAAGGGACAGAAACAGGAGTGCCTCCTGCTGTGCCAGGCCCATGGGCAGTGCAGGCAGATCCCTGAAGGTCAGCACTCCTGGGTCTTCATATGCCAACAGGGGCGCTCTTGACACTGTGCCTTCATTTTCCAGCCCACAGCCTGGGTCTCAGGGATCTTGAGGGGTAGAACATGTCTGGTTGGGGCTTGGGAATAAACATGATCTATTGAAAAACCTCTGTATTTATATATCAAATTGTTTCTTTTTTTCAGGAGTTGAACTGGGAATAGGCAAGTACCAGGCAAAGAAACACACCCtttccttttttttttttttttttctttagagctgtggtcttgctctctcacccaggctggagtgcagtgttgcgatcacagctcactgcagcctcaaactcctgggctccaggagacctcctgcctcagcctcctgaatagctgggactacagtcgcgcaccaccacgcctggctaattttttatttttgtagaaatggggtattgctttgttgcccgtgctggcttcagccttctggtttcaagcagtcctcctgcctcagcttcccaaagtgctgggattacaggtgtgagccactgtgcccaaccCAGAAATACACCCTTTCTGTGCTGTTTTCTCAGCAGGGTGTGAGCTCACGGGATACGGTCCTGCCAGACTGGCCCTCATAGCTGGTCATGTGCCAGTCAGAGCTGGGTGGGGCTTGCAGGTCCCGGAAGGTGGTGGTCTTGACCTGGCAGCAGATGCTTAAAGAATGCCTAAGGTGGGTGGCAGTTGGGGAGTTCAAGGGTGAATGAGGCCAGGGCAGCCCCCAGGAGCTGAGGCCAACTCTTTGAGTCAGGACTGTGCCGTGTGCCCAGGGCCTTGCATGTGTGGGCCCTCGAGTGATTTCTACTGGCAGGCTGAAAGCCCTGTGAGGGGCGGCTGTGGGCGGAGGCCACGCAGGAAGAGTGCTTAGGAGTAACTTGTTTCTAACACCTGTGTGCTGAGTGCCAATGCTGGGtgtggtgttatgatatatattggttttcatccagcattcctgactcgtaactctcatagtccttgttccagtctttgttagaatactgggtatgttagggcttgggacaggcctctgacctctgggtatcctttcactaatgttcgcccacctttttcacagtgggtcctaaagaccttcccatgagagggtctcaatcctaggggaaggaatgttgATGTCatgaaccttccataaaaacccaagaggacagggttcagagagcttctggatagctgaacacctggcacttcctggagtgtggcgtgcccagggagggcacggaagctctgcactccttccccttccctcattccttgctctatgtgcatctcttcatctgtatcctttgcgatatcctttataataaaccggtaaacataa</dnaseq>|
 
}}
 
}}
[[Category:Sense]][[Category:NONHSAG006129]]
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[[Category:Sense]][[Category:NONHSAG006129]][[Category:Transcripts]]

Revision as of 11:42, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT013827

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2589 nt

Genomic location

chr10-:71897737..71906496

Exon number

4

Exons

71897737..71899897,71902521..71902609,71903598..71903728,71906289..71906496

Genome context

Sequence
000001 AATCGGGCTC GATGAGGAAG ACGTGAGTCA GAGCTTGCGC CTCTCGCTTC CAGCTGTGGG TGGCGCTAGG CAGCTTCAGC 000080
000081 CGGACCGGGT AGGGGTCCTC GCTCGCTAGC TTGCTGTTTC TCGGAGAAGC TCCCGAGTGT CCGGCCTAGA GGCCATGAGA 000160
000161 AGGCAGTGGG GGTCTGCCAT GAGGGCGGCC GAGCAGGCGG GCTGCATGGA GTGTGGCCAT CTGGGGCCGT GTGGTATTTG 000240
000241 CCACTCAGGA GACATGTCCC TATGACATAG CAGTGGTGAG CCTGGAGGAG GACCTGGATG ATGTCCCCAT CCCTGTGCCC 000320
000321 GCTGAGCACT TCCATGAAGG CGAGGCTGTG AGTGTGGTGG GCTTTGGCGT CTTTGGCCAG TCTTGCGGGC CCTCGGTGAC 000400
000401 CTCAGGCATC CTTTCGGCTG TGGTGCAGGC ATAATCACCA GCAACACCCG GGACAATAAT ACGGGGGCCA CCTACCCCCA 000480
000481 CCTGAACTTC AGCATTCCCA TCACGGTGCT CCAGCCGGCC CTGCAGCAGT ACAGCCAGAC CCAAGACCTA GGTGGCCTCC 000560
000561 GTGAGCTGGA CCGCGCTGCT GAGCCAGTCA GGGTGGTGTG GCGGTTGCAG CGGCCCCTGG CAGAGGCCCC GCGGAGCAAG 000640
000641 CTCTGAGGCT GTGTTACCAC CTTTGGAAAG AAGAGTGACC TTTTTCTGCT GTAGGAAGTG ATGTTGAGGT GACGGTGGCC 000720
000721 TCAGGATTCA GGGCCCAGCC CCTGCAGGGG CCCAGGCTGC CTCTCATCTC CACCCACTGA CTGCAGACTG GGCTTTGGGC 000800
000801 TCTGGGGCAA ACTTCTCTTC AGCCCCATGG ATCCTTAACC TGGCAGCCCG TTTTGGGGTG CTTTCTTGAG CCCCCAGTTC 000880
000881 TCTGTCCCCT AGCACTAGAC TCAGCTGTAT TGTTTTTCCT TCTGGGGAGC CCACTCCAAC TGCACAGAAG TTCTGGGCCT 000960
000961 GACAGGTAGA TTCCAGCTGG AAGGCAGGCC CGTGCCTGGT TTTGCGTCTG TTCCCCTGAG GGCCATCGTC ATCCTGGAGC 001040
001041 TTCAATGGGG CCTTGGCTCC TGTCTGCCTC TCAGTCAGAG TCAGGGCTGA CAAAGGACTC AGCTTCCTTA GCATCTCAGC 001120
001121 AGAAACCTTG CTCTGAAGAC CAGAGACAGA AGGGACAGAA ACAGGAGTGC CTCCTGCTGT GCCAGGCCCA TGGGCAGTGC 001200
001201 AGGCAGATCC CTGAAGGTCA GCACTCCTGG GTCTTCATAT GCCAACAGGG GCGCTCTTGA CACTGTGCCT TCATTTTCCA 001280
001281 GCCCACAGCC TGGGTCTCAG GGATCTTGAG GGGTAGAACA TGTCTGGTTG GGGCTTGGGA ATAAACATGA TCTATTGAAA 001360
001361 AACCTCTGTA TTTATATATC AAATTGTTTC TTTTTTTCAG GAGTTGAACT GGGAATAGGC AAGTACCAGG CAAAGAAACA 001440
001441 CACCCtttcc tttttttttt ttttttttct ttagagctgt ggtcttgctc tctcacccag gctggagtgc agtgttgcga 001520
001521 tcacagctca ctgcagcctc aaactcctgg gctccaggag acctcctgcc tcagcctcct gaatagctgg gactacagtc 001600
001601 gcgcaccacc acgcctggct aattttttat ttttgtagaa atggggtatt gctttgttgc ccgtgctggc ttcagccttc 001680
001681 tggtttcaag cagtcctcct gcctcagctt cccaaagtgc tgggattaca ggtgtgagcc actgtgccca accCAGAAAT 001760
001761 ACACCCTTTC TGTGCTGTTT TCTCAGCAGG GTGTGAGCTC ACGGGATACG GTCCTGCCAG ACTGGCCCTC ATAGCTGGTC 001840
001841 ATGTGCCAGT CAGAGCTGGG TGGGGCTTGC AGGTCCCGGA AGGTGGTGGT CTTGACCTGG CAGCAGATGC TTAAAGAATG 001920
001921 CCTAAGGTGG GTGGCAGTTG GGGAGTTCAA GGGTGAATGA GGCCAGGGCA GCCCCCAG