Difference between revisions of "ENST00000535249.1"

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sequence = <dnaseq>ATGCGCGGAGGGGGAAGCAGTGGCGAAATTGGATGCTTTTTGCTGAGTTTCTCAGAGAAGTTTCTGGAAAGATGGAGCCAAAGGGACGCTGGGGGGTGGGGAGCGCCAGGAAGCAAGCGTTTGAAAGAAAGCGAAAAAACCCAAGCGCACCGCGACACCTCCAACCTTCAAGCCACGGCCCAAGCAGAGCCCAAGGCCACTGAGACCCTCACGCCAGAGAAAAAGCACAGGGACCGCGGCAGCCGCTCCTCCCTCTGCCACTGCTCAGCCCCCGAGACTCCCCAGCACGGGGAGAGGGCAGGGGGTAGCCATGAGAAACCTAGAGCGCTCACTGGACTTTTGCGAGGTGGAAGGAAAGCCGAAACCCGCCCTTTGGAGCCGCCTGTGCGCACGGGCCCCGTCGAGTGGGCTCAGTACGTTAGGACTCAGCGTGGCCGCCAAAGCATTGGTTGGGGGCGTCTTTCACTAATTTTTCCTAGGTTTTCTCTTCTATCGGGCTCTGTGGTCCTTTCACCACCCATCTTCACTTTGGTGGCCTGACGCTAACGCTGCGAGTTGGGGAAACCGTAGTAACCCCGGGCCTGAGGGGCGTCCCGGGCGGCGGTGCTCCGTTTCTTCCAGCGGTTGCCCCTTTAAGAAAAAGCCCCCCGGAGAGGGGCCCGTGTGGCTGAGTAAAGGTGGCGTGCGCCCGCACAAAGGCGCCGCGTTGTTGGCGGGCTCCGGACCCTGTTGCCCCTGGGCGGGGCGGCGTGGGAAGACCGGGGCGCCTGGGCGGGGAGAACGACGTTGGCGCTAGCGGGGCAGGGCAGGGGGAGGGAGTCACGGGATTTAGCAGGTGCTTCTCCGCGACCGAGCGACTGCCATTTTGTGGTGCGGCCGCCGCCATTTCGCGCGGCCGAGGGGCGGGGTGTGGGCGGAGCGGCGGGCGCGCCCGGGCTGTCCCTCGGGGCGGCGGGCTAACGCGGCCGCTTTGTTCTTCGCTTCTCGGCTCGAGGCCCCAGTCTCGACCGCCGACCGCCTCGGAACCGGGCTGCATCCGAGCTGCCACGCGGCGTGTGAACCTTGAAGCGCGGCCGGGGAATCCGCAAGGCGCCGACTCTCTTCCTCCTTGCAAGCCCTTCGAAAGTGAGATTTCTCACCCCACCCTTGCAGGGTGGAGAGAACACGTTTCAAAAAGGGGATGCCTAGAACTCAGCCGTGGGAAGTGCCTGTCTAAAGCCTTGTGCTGGTGCCAGTAGCAAACCCGTGCGCGTGCTCGGCTTTGAGCGATCATGGAGCTCTGCAAATAGCTCAACTGCAGAGCGTGCCCCTTAGAGCTCCTGTGCTGCTGGGAGGCCTCATAAAGGTGCCAAAACCAGGTGTCCCCAGCGGTTGGCCTCTTTAAAAAGAAAAAAAAAAAAAGGCGGAGTGGGATGTCCTTGACGTGCTGAAAGACGGAGTAGAATGAGACGTTGGTTTTCATTGGCTGGCCATTAAGCACGCACTGCGCAACTGTTTTCCAGATACGGGTTTATAGCCCATTATTTATATCGGAGCCATAAACTTGAACAATAGATTGGAATATCTTATTTTTGCCTGTTGAGAATATCTCCCATTTAACTTCTTTTGAAAGTTCAGATGAGTATATAAATAATACATTGACCCAGTAGAATCTATTGTGTGCGTTCCAGCGTCATTTCAAAGAGCTATTGTTTTTCTGATTTCAAAAGAAATATTTAAATGTGAGTCTTTGTGTTTTAATGTTAACCTTGTGGTTCGAAATCAACAAAGCCAGGAAATTCAAGAGAACTGCTGCT</dnaseq>|
 
sequence = <dnaseq>ATGCGCGGAGGGGGAAGCAGTGGCGAAATTGGATGCTTTTTGCTGAGTTTCTCAGAGAAGTTTCTGGAAAGATGGAGCCAAAGGGACGCTGGGGGGTGGGGAGCGCCAGGAAGCAAGCGTTTGAAAGAAAGCGAAAAAACCCAAGCGCACCGCGACACCTCCAACCTTCAAGCCACGGCCCAAGCAGAGCCCAAGGCCACTGAGACCCTCACGCCAGAGAAAAAGCACAGGGACCGCGGCAGCCGCTCCTCCCTCTGCCACTGCTCAGCCCCCGAGACTCCCCAGCACGGGGAGAGGGCAGGGGGTAGCCATGAGAAACCTAGAGCGCTCACTGGACTTTTGCGAGGTGGAAGGAAAGCCGAAACCCGCCCTTTGGAGCCGCCTGTGCGCACGGGCCCCGTCGAGTGGGCTCAGTACGTTAGGACTCAGCGTGGCCGCCAAAGCATTGGTTGGGGGCGTCTTTCACTAATTTTTCCTAGGTTTTCTCTTCTATCGGGCTCTGTGGTCCTTTCACCACCCATCTTCACTTTGGTGGCCTGACGCTAACGCTGCGAGTTGGGGAAACCGTAGTAACCCCGGGCCTGAGGGGCGTCCCGGGCGGCGGTGCTCCGTTTCTTCCAGCGGTTGCCCCTTTAAGAAAAAGCCCCCCGGAGAGGGGCCCGTGTGGCTGAGTAAAGGTGGCGTGCGCCCGCACAAAGGCGCCGCGTTGTTGGCGGGCTCCGGACCCTGTTGCCCCTGGGCGGGGCGGCGTGGGAAGACCGGGGCGCCTGGGCGGGGAGAACGACGTTGGCGCTAGCGGGGCAGGGCAGGGGGAGGGAGTCACGGGATTTAGCAGGTGCTTCTCCGCGACCGAGCGACTGCCATTTTGTGGTGCGGCCGCCGCCATTTCGCGCGGCCGAGGGGCGGGGTGTGGGCGGAGCGGCGGGCGCGCCCGGGCTGTCCCTCGGGGCGGCGGGCTAACGCGGCCGCTTTGTTCTTCGCTTCTCGGCTCGAGGCCCCAGTCTCGACCGCCGACCGCCTCGGAACCGGGCTGCATCCGAGCTGCCACGCGGCGTGTGAACCTTGAAGCGCGGCCGGGGAATCCGCAAGGCGCCGACTCTCTTCCTCCTTGCAAGCCCTTCGAAAGTGAGATTTCTCACCCCACCCTTGCAGGGTGGAGAGAACACGTTTCAAAAAGGGGATGCCTAGAACTCAGCCGTGGGAAGTGCCTGTCTAAAGCCTTGTGCTGGTGCCAGTAGCAAACCCGTGCGCGTGCTCGGCTTTGAGCGATCATGGAGCTCTGCAAATAGCTCAACTGCAGAGCGTGCCCCTTAGAGCTCCTGTGCTGCTGGGAGGCCTCATAAAGGTGCCAAAACCAGGTGTCCCCAGCGGTTGGCCTCTTTAAAAAGAAAAAAAAAAAAAGGCGGAGTGGGATGTCCTTGACGTGCTGAAAGACGGAGTAGAATGAGACGTTGGTTTTCATTGGCTGGCCATTAAGCACGCACTGCGCAACTGTTTTCCAGATACGGGTTTATAGCCCATTATTTATATCGGAGCCATAAACTTGAACAATAGATTGGAATATCTTATTTTTGCCTGTTGAGAATATCTCCCATTTAACTTCTTTTGAAAGTTCAGATGAGTATATAAATAATACATTGACCCAGTAGAATCTATTGTGTGCGTTCCAGCGTCATTTCAAAGAGCTATTGTTTTTCTGATTTCAAAAGAAATATTTAAATGTGAGTCTTTGTGTTTTAATGTTAACCTTGTGGTTCGAAATCAACAAAGCCAGGAAATTCAAGAGAACTGCTGCT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-ZBTB17-1]][[Category:NONHSAG000448]][[Category:ENSG00000179743.2]]
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[[Category:Intergenic]][[Category:lnc-ZBTB17-1]][[Category:NONHSAG000448]][[Category:ENSG00000179743.2]][[Category:Transcripts]]

Revision as of 11:50, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000535249.1

Source

Gencode19

Same with

lnc-ZBTB17-1:2,NONHSAT001062

Classification

intergenic

Length

1796 nt

Genomic location

chr1-:16160560..16162355

Exon number

1

Exons

16160560..16162355

Genome context

Sequence
000001 ATGCGCGGAG GGGGAAGCAG TGGCGAAATT GGATGCTTTT TGCTGAGTTT CTCAGAGAAG TTTCTGGAAA GATGGAGCCA 000080
000081 AAGGGACGCT GGGGGGTGGG GAGCGCCAGG AAGCAAGCGT TTGAAAGAAA GCGAAAAAAC CCAAGCGCAC CGCGACACCT 000160
000161 CCAACCTTCA AGCCACGGCC CAAGCAGAGC CCAAGGCCAC TGAGACCCTC ACGCCAGAGA AAAAGCACAG GGACCGCGGC 000240
000241 AGCCGCTCCT CCCTCTGCCA CTGCTCAGCC CCCGAGACTC CCCAGCACGG GGAGAGGGCA GGGGGTAGCC ATGAGAAACC 000320
000321 TAGAGCGCTC ACTGGACTTT TGCGAGGTGG AAGGAAAGCC GAAACCCGCC CTTTGGAGCC GCCTGTGCGC ACGGGCCCCG 000400
000401 TCGAGTGGGC TCAGTACGTT AGGACTCAGC GTGGCCGCCA AAGCATTGGT TGGGGGCGTC TTTCACTAAT TTTTCCTAGG 000480
000481 TTTTCTCTTC TATCGGGCTC TGTGGTCCTT TCACCACCCA TCTTCACTTT GGTGGCCTGA CGCTAACGCT GCGAGTTGGG 000560
000561 GAAACCGTAG TAACCCCGGG CCTGAGGGGC GTCCCGGGCG GCGGTGCTCC GTTTCTTCCA GCGGTTGCCC CTTTAAGAAA 000640
000641 AAGCCCCCCG GAGAGGGGCC CGTGTGGCTG AGTAAAGGTG GCGTGCGCCC GCACAAAGGC GCCGCGTTGT TGGCGGGCTC 000720
000721 CGGACCCTGT TGCCCCTGGG CGGGGCGGCG TGGGAAGACC GGGGCGCCTG GGCGGGGAGA ACGACGTTGG CGCTAGCGGG 000800
000801 GCAGGGCAGG GGGAGGGAGT CACGGGATTT AGCAGGTGCT TCTCCGCGAC CGAGCGACTG CCATTTTGTG GTGCGGCCGC 000880
000881 CGCCATTTCG CGCGGCCGAG GGGCGGGGTG TGGGCGGAGC GGCGGGCGCG CCCGGGCTGT CCCTCGGGGC GGCGGGCTAA 000960
000961 CGCGGCCGCT TTGTTCTTCG CTTCTCGGCT CGAGGCCCCA GTCTCGACCG CCGACCGCCT CGGAACCGGG CTGCATCCGA 001040
001041 GCTGCCACGC GGCGTGTGAA CCTTGAAGCG CGGCCGGGGA ATCCGCAAGG CGCCGACTCT CTTCCTCCTT GCAAGCCCTT 001120
001121 CGAAAGTGAG ATTTCTCACC CCACCCTTGC AGGGTGGAGA GAACACGTTT CAAAAAGGGG ATGCCTAGAA CTCAGCCGTG 001200
001201 GGAAGTGCCT GTCTAAAGCC TTGTGCTGGT GCCAGTAGCA AACCCGTGCG CGTGCTCGGC TTTGAGCGAT CATGGAGCTC 001280
001281 TGCAAATAGC TCAACTGCAG AGCGTGCCCC TTAGAGCTCC TGTGCTGCTG GGAGGCCTCA TAAAGGTGCC AAAACCAGGT 001360
001361 GTCCCCAGCG GTTGGCCTCT TTAAAAAGAA AAAAAAAAAA AGGCGGAGTG GGATGTCCTT GACGTGCTGA AAGACGGAGT 001440
001441 AGAATGAGAC GTTGGTTTTC ATTGGCTGGC CATTAAGCAC GCACTGCGCA ACTGTTTTCC AGATACGGGT TTATAGCCCA 001520
001521 TTATTTATAT CGGAGCCATA AACTTGAACA ATAGATTGGA ATATCTTATT TTTGCCTGTT GAGAATATCT CCCATTTAAC 001600
001601 TTCTTTTGAA AGTTCAGATG AGTATATAAA TAATACATTG ACCCAGTAGA ATCTATTGTG TGCGTTCCAG CGTCATTTCA 001680
001681 AAGAGCTATT GTTTTTCTGA TTTCAAAAGA AATATTTAAA TGTGAGTCTT TGTGTTTTAA TGTTAACCTT GTGGTTCGAA 001760
001761 ATCAACAAAG CCAGGAAATT CAAGAGAACT GCTGCT
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