Difference between revisions of "ENST00000299997.4"
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sequence = <dnaseq>GACTGGGTGGATGAGGCTCACCCCGGCGGGGAGAAGGGACGAGGAGGGGCGGACAGCGGAAGGTCCGGGAGTGTCCGCCATAAAGTCGTTTGAGTTTTAACTTCTAGTCATGGCGAATGATCGCAGGAGAGCACAGACTGGACCCTGCTACGATCTCTCTTGGAGTGGATCAGACTGATGATCACCAACAACCAACTCATTCCCGGATAAGGAAGAAGAGAGTGTCACCTACTTCAGTGTGGTTTCAACCCTACTTCTGCATCTTAAAGACACTGTGTACAACGTTGGACACTGTGCAGGATGATGCCACTTCATCTTGGATGCTAATCTGCCATGTTGACTTCTGATTAACCCCAGGCCCAGGAATGCCTCAAGATTTCTACTTTACTTACTGTTGCTTGTGTAAGCCAAGACAACCTTGATGTTATCATAAACATGTACTTACCTAAGTCCTGTCCTTTGGCAAATTATGGGCTATGAGACACAGCATTCTTGCCTTTCCCTGAGGGGTCAATTTCAGCGATCCTACACATTCCTTCTGAAGCACTTATGCTCTTTCTATATGGTATGTAAGCTCTCGGTCTGGGGAGTAACAGTGCAGAGATCTACCTGTCTTGTTGCCACATGTTTCTAAACTTTCCAATAAATCACCTTCTACTG</dnaseq>| | sequence = <dnaseq>GACTGGGTGGATGAGGCTCACCCCGGCGGGGAGAAGGGACGAGGAGGGGCGGACAGCGGAAGGTCCGGGAGTGTCCGCCATAAAGTCGTTTGAGTTTTAACTTCTAGTCATGGCGAATGATCGCAGGAGAGCACAGACTGGACCCTGCTACGATCTCTCTTGGAGTGGATCAGACTGATGATCACCAACAACCAACTCATTCCCGGATAAGGAAGAAGAGAGTGTCACCTACTTCAGTGTGGTTTCAACCCTACTTCTGCATCTTAAAGACACTGTGTACAACGTTGGACACTGTGCAGGATGATGCCACTTCATCTTGGATGCTAATCTGCCATGTTGACTTCTGATTAACCCCAGGCCCAGGAATGCCTCAAGATTTCTACTTTACTTACTGTTGCTTGTGTAAGCCAAGACAACCTTGATGTTATCATAAACATGTACTTACCTAAGTCCTGTCCTTTGGCAAATTATGGGCTATGAGACACAGCATTCTTGCCTTTCCCTGAGGGGTCAATTTCAGCGATCCTACACATTCCTTCTGAAGCACTTATGCTCTTTCTATATGGTATGTAAGCTCTCGGTCTGGGGAGTAACAGTGCAGAGATCTACCTGTCTTGTTGCCACATGTTTCTAAACTTTCCAATAAATCACCTTCTACTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000166770.6]][[Category:NONHSAG026631]] | + | [[Category:Intergenic]][[Category:ENSG00000166770.6]][[Category:NONHSAG026631]][[Category:Transcripts]] |
Latest revision as of 14:39, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000299997.4 |
| Source |
Gencode19 |
| Same with |
NONHSAT068161 |
| Classification |
intergenic |
| Length |
660 nt |
| Genomic location |
chr19+:56989552..57006801 |
| Exon number |
3 |
| Exons |
56989552..56989645,57005532..57005711,57006416..57006801 |
| Genome context |
|
| Sequence |
000001 GACTGGGTGG ATGAGGCTCA CCCCGGCGGG GAGAAGGGAC GAGGAGGGGC GGACAGCGGA AGGTCCGGGA GTGTCCGCCA 000080
000081 TAAAGTCGTT TGAGTTTTAA CTTCTAGTCA TGGCGAATGA TCGCAGGAGA GCACAGACTG GACCCTGCTA CGATCTCTCT 000160 000161 TGGAGTGGAT CAGACTGATG ATCACCAACA ACCAACTCAT TCCCGGATAA GGAAGAAGAG AGTGTCACCT ACTTCAGTGT 000240 000241 GGTTTCAACC CTACTTCTGC ATCTTAAAGA CACTGTGTAC AACGTTGGAC ACTGTGCAGG ATGATGCCAC TTCATCTTGG 000320 000321 ATGCTAATCT GCCATGTTGA CTTCTGATTA ACCCCAGGCC CAGGAATGCC TCAAGATTTC TACTTTACTT ACTGTTGCTT 000400 000401 GTGTAAGCCA AGACAACCTT GATGTTATCA TAAACATGTA CTTACCTAAG TCCTGTCCTT TGGCAAATTA TGGGCTATGA 000480 000481 GACACAGCAT TCTTGCCTTT CCCTGAGGGG TCAATTTCAG CGATCCTACA CATTCCTTCT GAAGCACTTA TGCTCTTTCT 000560 000561 ATATGGTATG TAAGCTCTCG GTCTGGGGAG TAACAGTGCA GAGATCTACC TGTCTTGTTG CCACATGTTT CTAAACTTTC 000640 000641 CAATAAATCA CCTTCTACTG |
Predicted Small Protein
| Name | ENST00000299997.4_smProtein_116:346 |
| Length | 77 |
| Molecular weight | 8703.8111 |
| Aromaticity | 0.0789473684211 |
| Instability index | 41.8815789474 |
| Isoelectric point | 5.99261474609 |
| Runs | 14 |
| Runs residual | 0.0428009679371 |
| Runs probability | 0.0421429833195 |
| Amino acid sequence | MIAGEHRLDPATISLGVDQTDDHQQPTHSRIRKKRVSPTSVWFQPYFCILKTLCTTLDTV QDDATSSWMLICHVDF |
| Secondary structure | LLLLEELLLLLEEEELLLLLLLLLLLLLLLEEEEELLLLEEEELLLEEEEEHHHLLLLLL LLLLLLLEEEEEEEEL |
| PRMN | - |
| PiMo | - |
