Difference between revisions of "ENST00000565433.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>TAATCTTGCAGCACCTCAGTTTTCCCATTTCTAAAGTGTGCTGCTACCTTCCATGCAGGGCGTTGAGGGGCTTCCCTACGTTATTACGCACAAAGTCCTCCTCACAGTGCCTGGTGTGTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGGGTGTGGGAGGAGGGAAGCAGGTCTGTCCTGGGGGAATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCCAGGTGCCCAGCTGTGGGAGGGCAGCATGGAGAGGAGGAAGAGGGGGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTGCCTGCCTTCTCTGGACTGCACTGTAGGGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGACTACAGAGTGAGGGGTGTGCTTGTGGGGGTGAAGGGTTGGGGTGAGAACTGAGCCCGAGTCGAACTCATCCTCCTCTGCCCTGATGCACTGTGCAACTTGGGGGAGTCACTGTCCCTCTCTGGGCCTCGCTTTCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTCTGTCTTGGCTCCAGCTCAGGTGTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCCCTGGACTATTTTCAGCCCTTGCAGATGGAGTCAGAAGAGGATTTTCCACTCCCAGTACAATGACTGCCCTGGACCATTGTCCAGCAGTGACGCGGGGGACCTGCCTGCCCCAAAATATCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTGCTCCTCACCTCCTGGCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTTAACTCCTGAAGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCAGAGAGGGCTGTGCCTTACCCAGTCACACAGCAGTCAGTGTGAAGCTTAGGTGTAAGCCCAGGGCTCTTTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAGTCTGTGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGACCTTAAACCCTTTCTCCCCACTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCCCGCCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGGGGCCTTTGGGAAGTAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGGTTTAGTGCCCTTACAGAATGGACCCCAGAGAGCTCCTCACCCTCTTTCCACCATGTGAGGATATAATGAGAAGTTGGCAGTCTGCAACCTGGAAGAGGTCCCTCACCAGATCCCAACCATGCTGGCACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTGAGAAATAAATGTCTCTTGTTTCTAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGCCCACGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGCAGCTCTGGGGCAAAGGGGAGGGTGGGGGCCACAGGGCAGCTGATGCAGGAGCAGGGCTCTGGCACAGTTCAGCCATCACCAATTCTGGGACTGCAAATTCAGTTTCTTCATCTGGAAAATTGAACTGGTAATACCAATACCTCTTTTCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCCCTCTCTCCTCTAGGTGTTGGGGCAGGGTGGGGAGGAAAGGGACCAATGTGTCTTTCCTGGTGATGCTACAGCCCTCTCTTGCTGACCTTGCTTCCTGGGCCATCAGTGCCCCCTGCACAGAACTCTCCAAACATCAGTCCACACCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGCTGGGACTCTGACTGATACCCTGGTCTCCCTGAGTGATTTTCCTGCACACCCTGCTGGGGATGTGGAAGCCTGTCCCCCTCCCACCCCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGGTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAGATGTCTTACCCCAGTTGTTTCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGGAATTAAACTGTTAGACCTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGGGGAGGAAATTAAAAGCCTGCCACCTTAGTCCA</dnaseq>| | sequence = <dnaseq>TAATCTTGCAGCACCTCAGTTTTCCCATTTCTAAAGTGTGCTGCTACCTTCCATGCAGGGCGTTGAGGGGCTTCCCTACGTTATTACGCACAAAGTCCTCCTCACAGTGCCTGGTGTGTGGTCAGCATTTATATGCCTGGCACCAGGCCGGGGGCTATGGAGGCAAATCAGCTGGGCCCTGCCCTCACAGAGTTGACATCACTTAGTACGTAACCACATTGGGATACATGTTTTGAAGGAGAGGACAGTGTGTCTGGCCAGTGAGCAACAGTGGGCCATACGTCTCCAGGGAACCCCCGTGGGGTGTGGGAGGAGGGAAGCAGGTCTGTCCTGGGGGAATGTGTGGGACCACCTCTGCCCTGCTTGGCAGTAGGTGGATTTCAGGACCATGGGCCTGTGCTGTTTACAGAACCTTGTCCAGGTGCCCAGCTGTGGGAGGGCAGCATGGAGAGGAGGAAGAGGGGGCCCCTAGTAGCAAGCTTCAGAAACTTGCCACTTCAGGCTAGAGAGCTCGCACCCTCCCACGGCAGCAGGGTAGCCATTTCTCCCTGACTGGGGTGTCCACCATGGTGCTCTGCAGCCACCTCTCACTTCATTAAGAGTCCACAGATCTAGGAGCAGAGGACTGGTCTGGAGCTGGGCAAGGGCAGGCAGCAAATGGGGAGTTTTTGCTGTGTGACCTGAGGTCACTTGCCTGCCTTCTCTGGACTGCACTGTAGGGCCTGGAGACCTGTTCCCCTGTTCCAATTTCCCCACCTCAGTGAAGGCACAACCAACAGCTGCTCCCCGGGCATTTCCAAGACCCTCCAGGCCCCCAGCTCTGAGGACTAGGGTGGAGGCAGTGTTTCTCCCCAGCATCAAGTGACCAGAGAAGTGAAGTGACCCCACTGCCGCCACACAGAGCCACACAGTGCGATGTCTGGAGCTCCTGCCTCCTGCAAGGTGGAGGGTGGGGCTTGGCCAGGAGTGACCAGACTACAGAGTGAGGGGTGTGCTTGTGGGGGTGAAGGGTTGGGGTGAGAACTGAGCCCGAGTCGAACTCATCCTCCTCTGCCCTGATGCACTGTGCAACTTGGGGGAGTCACTGTCCCTCTCTGGGCCTCGCTTTCCCCATCTTCGATAGGACTTGGCTCTGCCTGGCCACTCCTCCTCCAATGGGGGAATTCCTGGGCTTGCCTCTGTCTTGGCTCCAGCTCAGGTGTCAGTCTCAGCCCTGTCCCAGCCAGGAACAATGGGCCAGGCAGGGCCAGTCACCCCCTGTCCCTGGGGGCTCCACCCACGGCCCTGGACTATTTTCAGCCCTTGCAGATGGAGTCAGAAGAGGATTTTCCACTCCCAGTACAATGACTGCCCTGGACCATTGTCCAGCAGTGACGCGGGGGACCTGCCTGCCCCAAAATATCTCCTGCCCCTAGTTTCCAAGCCTCTTTGCCCTGCTCCTCACCTCCTGGCCCTGCTCCTTACCTCCCCACCCTGATGTCATTTCCTGGGGCTCTTAACTCCTGAAGGCCATTGTGAAACATCACGTGAGACTCCTGGGAGACACAACCAGTTGGAATGAGTTTTCCCTCCTGGCAGGGACCCCAGGGATTGTTTGGCTGCTTAGTGGGACTGGTGGCCCAGAGAGGGCTGTGCCTTACCCAGTCACACAGCAGTCAGTGTGAAGCTTAGGTGTAAGCCCAGGGCTCTTTGGCTGCTCCCACTGCCTCAGCCAACTTCATTAGCTCCAGTCTGTGGCTCCTGGACTGGAGCTACAGTGGTGAGAGCTCACCACTGAGCTTCCTGGGATGGGCACCTGGGATAGCAGCCCAAGTGGTGTGGGTGGAGAGGTGCAGCTCATGCTCTGACCTTGGAGTGAGCCCAGTGCAGGGGCCTGACCTTAAACCCTTTCTCCCCACTGAGTCCCATTTTTACCAAATGTGGCTGTTAGGAACTGAATGTTTGTGTCCCCCGCCCCACAAATCCATATGTCAAAATCCCAACTGCCAAGGTGATGGTATTAGAAGGTGGGGCCTTTGGGAAGTAACCAGGTCCTAAGGGTGCAGCCCTCATGAATGGGTTTAGTGCCCTTACAGAATGGACCCCAGAGAGCTCCTCACCCTCTTTCCACCATGTGAGGATATAATGAGAAGTTGGCAGTCTGCAACCTGGAAGAGGTCCCTCACCAGATCCCAACCATGCTGGCACCCCGATCTTAGACTTCCAGTCTTCAGAATGGTGAGAAATAAATGTCTCTTGTTTCTAATCCACCCAGTCGGTGGCATTTTGTTATAGCAGCCCACGCTGACTGTGACTGAACTCAGGGTGACAGAGCAGCAGCTCTGGGGCAAAGGGGAGGGTGGGGGCCACAGGGCAGCTGATGCAGGAGCAGGGCTCTGGCACAGTTCAGCCATCACCAATTCTGGGACTGCAAATTCAGTTTCTTCATCTGGAAAATTGAACTGGTAATACCAATACCTCTTTTCCCGGTTTACTAGACAGAGACAATGCAGTGAGGCACAAACATGCAACTGTTTGATTTTCCTCCCACCCATGCTCCCTGCTCAGTGACGTGTGATTTTCCTTTCCCATCCATAAACTGCGCATTTGGCAAACTCCAAACTTTTGAGTCACTTTTGGGTAACAAAGTCAGGTTTAAGATTTCCATCGCCTGCTTAATTGAATGCTCACCTGTCCTCTTCCCCCATGCTGTGAGGACCTTCATCACTCCTCTTCTGGGTCCCTCTCTCCTCTAGGTGTTGGGGCAGGGTGGGGAGGAAAGGGACCAATGTGTCTTTCCTGGTGATGCTACAGCCCTCTCTTGCTGACCTTGCTTCCTGGGCCATCAGTGCCCCCTGCACAGAACTCTCCAAACATCAGTCCACACCTTTGTAAAAACAGTCTCTCCGCTAAGCTATCCCAAAATGACCTGATTAGAGTGTGCAACGTCTTTCCTGCTGGGACTCTGACTGATACCCTGGTCTCCCTGAGTGATTTTCCTGCACACCCTGCTGGGGATGTGGAAGCCTGTCCCCCTCCCACCCCACACCCCACACTTGGCTGAGATCTCACAGTGGCAAAGATGTCTTTGAATCCATGGTGCCCAGGGTTCAGCGTGTAGAGTGAGGTGGGGTGTGTAGAGAGCTGGGGCAAGGAACCCTGAGAAGATGTCTTACCCCAGTTGTTTCCAGGTTTCTTTAGAAAGCGGGCTATTTTACCCCATGTGTCCTCAGATTTATGTCCTGGAACCAAATTCCAAATCAGCAGCCACATGAAAAGTCCCCTCCTCTCTGGCGTGGAATTAAACTGTTAGACCTGCCTTTGTGACCAAAGCAATTGTAAAACGTGGGGGAGGAAATTAAAAGCCTGCCACCTTAGTCCA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-P2RY2-1]][[Category:NONHSAG009013]][[Category:ENSG00000260401.1]] | + | [[Category:Intergenic]][[Category:lnc-P2RY2-1]][[Category:NONHSAG009013]][[Category:ENSG00000260401.1]][[Category:Transcripts]] |
Latest revision as of 17:55, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000565433.1 |
Source |
Gencode19 |
Same with |
lnc-P2RY2-1:1,NONHSAT022816 |
Classification |
intergenic |
Length |
3361 nt |
Genomic location |
chr11+:72950020..72953380 |
Exon number |
1 |
Exons |
72950020..72953380 |
Genome context |
|
Sequence |
000001 TAATCTTGCA GCACCTCAGT TTTCCCATTT CTAAAGTGTG CTGCTACCTT CCATGCAGGG CGTTGAGGGG CTTCCCTACG 000080
000081 TTATTACGCA CAAAGTCCTC CTCACAGTGC CTGGTGTGTG GTCAGCATTT ATATGCCTGG CACCAGGCCG GGGGCTATGG 000160 000161 AGGCAAATCA GCTGGGCCCT GCCCTCACAG AGTTGACATC ACTTAGTACG TAACCACATT GGGATACATG TTTTGAAGGA 000240 000241 GAGGACAGTG TGTCTGGCCA GTGAGCAACA GTGGGCCATA CGTCTCCAGG GAACCCCCGT GGGGTGTGGG AGGAGGGAAG 000320 000321 CAGGTCTGTC CTGGGGGAAT GTGTGGGACC ACCTCTGCCC TGCTTGGCAG TAGGTGGATT TCAGGACCAT GGGCCTGTGC 000400 000401 TGTTTACAGA ACCTTGTCCA GGTGCCCAGC TGTGGGAGGG CAGCATGGAG AGGAGGAAGA GGGGGCCCCT AGTAGCAAGC 000480 000481 TTCAGAAACT TGCCACTTCA GGCTAGAGAG CTCGCACCCT CCCACGGCAG CAGGGTAGCC ATTTCTCCCT GACTGGGGTG 000560 000561 TCCACCATGG TGCTCTGCAG CCACCTCTCA CTTCATTAAG AGTCCACAGA TCTAGGAGCA GAGGACTGGT CTGGAGCTGG 000640 000641 GCAAGGGCAG GCAGCAAATG GGGAGTTTTT GCTGTGTGAC CTGAGGTCAC TTGCCTGCCT TCTCTGGACT GCACTGTAGG 000720 000721 GCCTGGAGAC CTGTTCCCCT GTTCCAATTT CCCCACCTCA GTGAAGGCAC AACCAACAGC TGCTCCCCGG GCATTTCCAA 000800 000801 GACCCTCCAG GCCCCCAGCT CTGAGGACTA GGGTGGAGGC AGTGTTTCTC CCCAGCATCA AGTGACCAGA GAAGTGAAGT 000880 000881 GACCCCACTG CCGCCACACA GAGCCACACA GTGCGATGTC TGGAGCTCCT GCCTCCTGCA AGGTGGAGGG TGGGGCTTGG 000960 000961 CCAGGAGTGA CCAGACTACA GAGTGAGGGG TGTGCTTGTG GGGGTGAAGG GTTGGGGTGA GAACTGAGCC CGAGTCGAAC 001040 001041 TCATCCTCCT CTGCCCTGAT GCACTGTGCA ACTTGGGGGA GTCACTGTCC CTCTCTGGGC CTCGCTTTCC CCATCTTCGA 001120 001121 TAGGACTTGG CTCTGCCTGG CCACTCCTCC TCCAATGGGG GAATTCCTGG GCTTGCCTCT GTCTTGGCTC CAGCTCAGGT 001200 001201 GTCAGTCTCA GCCCTGTCCC AGCCAGGAAC AATGGGCCAG GCAGGGCCAG TCACCCCCTG TCCCTGGGGG CTCCACCCAC 001280 001281 GGCCCTGGAC TATTTTCAGC CCTTGCAGAT GGAGTCAGAA GAGGATTTTC CACTCCCAGT ACAATGACTG CCCTGGACCA 001360 001361 TTGTCCAGCA GTGACGCGGG GGACCTGCCT GCCCCAAAAT ATCTCCTGCC CCTAGTTTCC AAGCCTCTTT GCCCTGCTCC 001440 001441 TCACCTCCTG GCCCTGCTCC TTACCTCCCC ACCCTGATGT CATTTCCTGG GGCTCTTAAC TCCTGAAGGC CATTGTGAAA 001520 001521 CATCACGTGA GACTCCTGGG AGACACAACC AGTTGGAATG AGTTTTCCCT CCTGGCAGGG ACCCCAGGGA TTGTTTGGCT 001600 001601 GCTTAGTGGG ACTGGTGGCC CAGAGAGGGC TGTGCCTTAC CCAGTCACAC AGCAGTCAGT GTGAAGCTTA GGTGTAAGCC 001680 001681 CAGGGCTCTT TGGCTGCTCC CACTGCCTCA GCCAACTTCA TTAGCTCCAG TCTGTGGCTC CTGGACTGGA GCTACAGTGG 001760 001761 TGAGAGCTCA CCACTGAGCT TCCTGGGATG GGCACCTGGG ATAGCAGCCC AAGTGGTGTG GGTGGAGAGG TGCAGCTCAT 001840 001841 GCTCTGACCT TGGAGTGAGC CCAGTGCAGG GGCCTGACCT TAAACCCTTT CTCCCCACTG AGTCCCATTT TTACCAAATG 001920 001921 TGGCTGTTAG GAACTGAATG TTTGTGTCCC CCGCCCCACA AATCCATATG TCAAAATCCC AACTGCCAAG GTGATGGTAT 002000 002001 TAGAAGGTGG GGCCTTTGGG AAGTAACCAG GTCCTAAGGG TGCAGCCCTC ATGAATGGGT TTAGTGCCCT TACAGAATGG 002080 002081 ACCCCAGAGA GCTCCTCACC CTCTTTCCAC CATGTGAGGA TATAATGAGA AGTTGGCAGT CTGCAACCTG GAAGAGGTCC 002160 002161 CTCACCAGAT CCCAACCATG CTGGCACCCC GATCTTAGAC TTCCAGTCTT CAGAATGGTG AGAAATAAAT GTCTCTTGTT 002240 002241 TCTAATCCAC CCAGTCGGTG GCATTTTGTT ATAGCAGCCC ACGCTGACTG TGACTGAACT CAGGGTGACA GAGCAGCAGC 002320 002321 TCTGGGGCAA AGGGGAGGGT GGGGGCCACA GGGCAGCTGA TGCAGGAGCA GGGCTCTGGC ACAGTTCAGC CATCACCAAT 002400 002401 TCTGGGACTG CAAATTCAGT TTCTTCATCT GGAAAATTGA ACTGGTAATA CCAATACCTC TTTTCCCGGT TTACTAGACA 002480 002481 GAGACAATGC AGTGAGGCAC AAACATGCAA CTGTTTGATT TTCCTCCCAC CCATGCTCCC TGCTCAGTGA CGTGTGATTT 002560 002561 TCCTTTCCCA TCCATAAACT GCGCATTTGG CAAACTCCAA ACTTTTGAGT CACTTTTGGG TAACAAAGTC AGGTTTAAGA 002640 002641 TTTCCATCGC CTGCTTAATT GAATGCTCAC CTGTCCTCTT CCCCCATGCT GTGAGGACCT TCATCACTCC TCTTCTGGGT 002720 002721 CCCTCTCTCC TCTAGGTGTT GGGGCAGGGT GGGGAGGAAA GGGACCAATG TGTCTTTCCT GGTGATGCTA CAGCCCTCTC 002800 002801 TTGCTGACCT TGCTTCCTGG GCCATCAGTG CCCCCTGCAC AGAACTCTCC AAACATCAGT CCACACCTTT GTAAAAACAG 002880 002881 TCTCTCCGCT AAGCTATCCC AAAATGACCT GATTAGAGTG TGCAACGTCT TTCCTGCTGG GACTCTGACT GATACCCTGG 002960 002961 TCTCCCTGAG TGATTTTCCT GCACACCCTG CTGGGGATGT GGAAGCCTGT CCCCCTCCCA CCCCACACCC CACACTTGGC 003040 003041 TGAGATCTCA CAGTGGCAAA GATGTCTTTG AATCCATGGT GCCCAGGGTT CAGCGTGTAG AGTGAGGTGG GGTGTGTAGA 003120 003121 GAGCTGGGGC AAGGAACCCT GAGAAGATGT CTTACCCCAG TTGTTTCCAG GTTTCTTTAG AAAGCGGGCT ATTTTACCCC 003200 003201 ATGTGTCCTC AGATTTATGT CCTGGAACCA AATTCCAAAT CAGCAGCCAC ATGAAAAGTC CCCTCCTCTC TGGCGTGGAA 003280 003281 TTAAACTGTT AGACCTGCCT TTGTGACCAA AGCAATTGTA AAACGTGGGG GAGGAAATTA AAAGCCTGCC ACCTTAGTCC 003360 003361 A |