Difference between revisions of "ENST00000608420.1"
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sequence = <dnaseq>GAAAGACTTGTGAATCCAGGAAGAGAGACTGACTGGGCAACATGTTATTCAGAATCTCCCTGTGCCATCCAGGCTGGAGTGCAGTGATGTGATCATAGCTCACTATAGCTTTGGCCTTCTGAGATCAAGCAATCCTCCCATCTCAACCTCCCAAGTAGCTAGGACTACACATGCATGTCACCCATGCCCAGATCATTTTTGTAGAGTCAGAGTTTCACCGTGGTGGCCAGGTTGGCCATGTTGGCCAGATGGGGTCTTCTTTTGTTGCCCAGGCTGGCCACAAATTCCTGGGCTCAAGTGATCCTCCCACCTCGTCCTTGTAGAGATGAGATTTAGTTACGTCGTCCAGGCTGATCTCAAACTCCTGGGCTAAATCGATTGTCTCACCTCAGCCTCTCAAGTATGTTATGAAGGTTATATGTTAGGAAGGGTCCCAGG</dnaseq>| | sequence = <dnaseq>GAAAGACTTGTGAATCCAGGAAGAGAGACTGACTGGGCAACATGTTATTCAGAATCTCCCTGTGCCATCCAGGCTGGAGTGCAGTGATGTGATCATAGCTCACTATAGCTTTGGCCTTCTGAGATCAAGCAATCCTCCCATCTCAACCTCCCAAGTAGCTAGGACTACACATGCATGTCACCCATGCCCAGATCATTTTTGTAGAGTCAGAGTTTCACCGTGGTGGCCAGGTTGGCCATGTTGGCCAGATGGGGTCTTCTTTTGTTGCCCAGGCTGGCCACAAATTCCTGGGCTCAAGTGATCCTCCCACCTCGTCCTTGTAGAGATGAGATTTAGTTACGTCGTCCAGGCTGATCTCAAACTCCTGGGCTAAATCGATTGTCTCACCTCAGCCTCTCAAGTATGTTATGAAGGTTATATGTTAGGAAGGGTCCCAGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000237094.7]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:ENSG00000237094.7]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 19:03, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000608420.1 |
| Source |
Gencode19 |
| Same with |
, |
| Classification |
intergenic |
| Length |
438 nt |
| Genomic location |
chr1+:317730..320353 |
| Exon number |
2 |
| Exons |
317730..317781,319968..320353 |
| Genome context |
|
| Sequence |
000001 GAAAGACTTG TGAATCCAGG AAGAGAGACT GACTGGGCAA CATGTTATTC AGAATCTCCC TGTGCCATCC AGGCTGGAGT 000080
000081 GCAGTGATGT GATCATAGCT CACTATAGCT TTGGCCTTCT GAGATCAAGC AATCCTCCCA TCTCAACCTC CCAAGTAGCT 000160 000161 AGGACTACAC ATGCATGTCA CCCATGCCCA GATCATTTTT GTAGAGTCAG AGTTTCACCG TGGTGGCCAG GTTGGCCATG 000240 000241 TTGGCCAGAT GGGGTCTTCT TTTGTTGCCC AGGCTGGCCA CAAATTCCTG GGCTCAAGTG ATCCTCCCAC CTCGTCCTTG 000320 000321 TAGAGATGAG ATTTAGTTAC GTCGTCCAGG CTGATCTCAA ACTCCTGGGC TAAATCGATT GTCTCACCTC AGCCTCTCAA 000400 000401 GTATGTTATG AAGGTTATAT GTTAGGAAGG GTCCCAGG |
Predicted Small Protein
| Name | ENST00000608420.1_smProtein_170:322 |
| Length | 51 |
| Molecular weight | 5291.8467 |
| Aromaticity | 0.08 |
| Instability index | 43.272 |
| Isoelectric point | 6.47698974609 |
| Runs | 9 |
| Runs residual | 0.0153216374269 |
| Runs probability | 0.0358888300065 |
| Amino acid sequence | MHVTHAQIIFVESEFHRGGQVGHVGQMGSSFVAQAGHKFLGSSDPPTSSL |
| Secondary structure | LEEEEEEEEEEEEEEELLLEEEEEELLLHHHHHHHLLLEELLLLLLLLLL |
| PRMN | - |
| PiMo | - |
