Difference between revisions of "NONHSAT011510"
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sequence = <dnaseq>GGAAGCACATTCAAAGATGTAGATCCCCTCAGAGAAGTTTTCCATTTCCCTGAAGTTAAAGATCTTCAAATGACTGCAAATAACATGAGGATATATAGAAAAATGCCCTTCCCCAATTTCCAAATCGTGAAAATTTGGCTCAGCAGGTGTACACTTAAAGCGTTCTGGGAATATGAATCCCTTCTGCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTGGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCTGCCGGGTCCCGGCCAGGAACAACTGGATGTTGTAAATGTTTCTCATCTGGCCTTAAAATCCATGAAAGCTGGAAAATCACAAGGCATCTGTGCATATACTGGTGGATTTTAATGAGAGTCCTGTGTTTGGAGCACCAGAAATAAACCAGCTTCAGAAGCAAAGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCC</dnaseq>| | sequence = <dnaseq>GGAAGCACATTCAAAGATGTAGATCCCCTCAGAGAAGTTTTCCATTTCCCTGAAGTTAAAGATCTTCAAATGACTGCAAATAACATGAGGATATATAGAAAAATGCCCTTCCCCAATTTCCAAATCGTGAAAATTTGGCTCAGCAGGTGTACACTTAAAGCGTTCTGGGAATATGAATCCCTTCTGCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTGGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCTGCCGGGTCCCGGCCAGGAACAACTGGATGTTGTAAATGTTTCTCATCTGGCCTTAAAATCCATGAAAGCTGGAAAATCACAAGGCATCTGTGCATATACTGGTGGATTTTAATGAGAGTCCTGTGTTTGGAGCACCAGAAATAAACCAGCTTCAGAAGCAAAGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:NONHSAG005273]][[Category:Transcripts]] | + | [[Category:Antisense]][[Category:NONHSAG005273]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:03, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT011510 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
712 nt |
| Genomic location |
chr10+:13674680..13697482 |
| Exon number |
6 |
| Exons |
13674680..13674825,13686917..13687074,13690085..13690230,13694408..13694489,13696353..13696427,13697378..13697482 |
| Genome context |
|
| Sequence |
000001 GGAAGCACAT TCAAAGATGT AGATCCCCTC AGAGAAGTTT TCCATTTCCC TGAAGTTAAA GATCTTCAAA TGACTGCAAA 000080
000081 TAACATGAGG ATATATAGAA AAATGCCCTT CCCCAATTTC CAAATCGTGA AAATTTGGCT CAGCAGGTGT ACACTTAAAG 000160 000161 CGTTCTGGGA ATATGAATCC CTTCTGCACC CTGGAATCAC CAGTCCAGCC ATGCATGGAG CTGGGGAAAG CAGGCCCTGA 000240 000241 ATTGTCTAGA GAGACTTGGT GGAGGAGGCC ACGGCCCGCC TTGTCCCTGC CGGGTCCCGG CCAGGAACAA CTGGATGTTG 000320 000321 TAAATGTTTC TCATCTGGCC TTAAAATCCA TGAAAGCTGG AAAATCACAA GGCATCTGTG CATATACTGG TGGATTTTAA 000400 000401 TGAGAGTCCT GTGTTTGGAG CACCAGAAAT AAACCAGCTT CAGAAGCAAA GTGAGACTGG GCATGATTCA GAAAAGTTGG 000480 000481 AAGATCTAGA GAGGGATCTT GCAATCTGAA GTTTCTTGTT TAGTCACTGG AGGATCTGAA CGTCTATGAC ACTCTTTCGA 000560 000561 GCTGACACAG TGAAGAACAT AGAAGGAGAA CTCACCCAGT CTGCCAGGGT CACAGAATGA TCATACTCAA GATCTTCCTG 000640 000641 GGGAGTCAAT GGCAAATTTC ACTGGGCTAT TTTACAGATG AAGAAGGAAC ATAAAGAAGG TTCTGGGACC CC |
Predicted Small Protein
| Name | NONHSAT011510_smProtein_545:619 |
| Length | 25 |
| Molecular weight | 2710.0248 |
| Aromaticity | 0.0416666666667 |
| Instability index | 50.5125 |
| Isoelectric point | 5.05877685547 |
| Runs | 5 |
| Runs residual | 0.0267857142857 |
| Runs probability | 0.0490902667374 |
| Amino acid sequence | MTLFRADTVKNIEGELTQSARVTE |
| Secondary structure | LEEEEELLHHHHHHHHLLLLLLLL |
| PRMN | - |
| PiMo | - |
