Difference between revisions of "NONHSAT026897"
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sequence = <dnaseq>TTTCCTTTGGGGAAGAGGAGGGCGCTAGAAGGAGACGGGGAGGGAAAGATAGAAAAGCTTCTTGCCAGGAAGGGTCAGGTGTCTGTCCCTGACGCCCTTCCCACATGGGCATGGGAAAGACGCCATGCTCCTGTTGGCCACATGCCAGCAAAGAGATGTTGCAATCGTCTCCGGGAAACTTGGGTCTTAGTCCCACGTCTTCCTCCCCCTCTCTGTGCCCACGGCTGCAAACAGCCATTCAGTGTCCACCAATGGCTACACGCTTCCCTCTTCCCGGACTGTGGGAACGCACGTGGTGTAGCAGCTGAAAAAACTTTGTCGGAAGTGGGGGTATGACTGTATATGAAGTGGGTTTATGGTTTAAAGCAAGACGTGGGAATGAATTTGATCATAAGAAGTCCTTGGAGAAGTATTTGCGGAATTACGAAACTTTTTTAAACTACATTGGAGAGTAAAAATAACCTTCAGCTTGGATTGAGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTATAAATCGAAATG</dnaseq>| | sequence = <dnaseq>TTTCCTTTGGGGAAGAGGAGGGCGCTAGAAGGAGACGGGGAGGGAAAGATAGAAAAGCTTCTTGCCAGGAAGGGTCAGGTGTCTGTCCCTGACGCCCTTCCCACATGGGCATGGGAAAGACGCCATGCTCCTGTTGGCCACATGCCAGCAAAGAGATGTTGCAATCGTCTCCGGGAAACTTGGGTCTTAGTCCCACGTCTTCCTCCCCCTCTCTGTGCCCACGGCTGCAAACAGCCATTCAGTGTCCACCAATGGCTACACGCTTCCCTCTTCCCGGACTGTGGGAACGCACGTGGTGTAGCAGCTGAAAAAACTTTGTCGGAAGTGGGGGTATGACTGTATATGAAGTGGGTTTATGGTTTAAAGCAAGACGTGGGAATGAATTTGATCATAAGAAGTCCTTGGAGAAGTATTTGCGGAATTACGAAACTTTTTTAAACTACATTGGAGAGTAAAAATAACCTTCAGCTTGGATTGAGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTATAAATCGAAATG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG010491]] | + | [[Category:Sense]][[Category:NONHSAG010491]][[Category:Transcripts]] |
Latest revision as of 20:54, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026897 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
548 nt |
Genomic location |
chr12-:10870716..10874995 |
Exon number |
4 |
Exons |
10870716..10870720,10871679..10871742,10873390..10873531,10874659..10874995 |
Genome context |
|
Sequence |
000001 TTTCCTTTGG GGAAGAGGAG GGCGCTAGAA GGAGACGGGG AGGGAAAGAT AGAAAAGCTT CTTGCCAGGA AGGGTCAGGT 000080
000081 GTCTGTCCCT GACGCCCTTC CCACATGGGC ATGGGAAAGA CGCCATGCTC CTGTTGGCCA CATGCCAGCA AAGAGATGTT 000160 000161 GCAATCGTCT CCGGGAAACT TGGGTCTTAG TCCCACGTCT TCCTCCCCCT CTCTGTGCCC ACGGCTGCAA ACAGCCATTC 000240 000241 AGTGTCCACC AATGGCTACA CGCTTCCCTC TTCCCGGACT GTGGGAACGC ACGTGGTGTA GCAGCTGAAA AAACTTTGTC 000320 000321 GGAAGTGGGG GTATGACTGT ATATGAAGTG GGTTTATGGT TTAAAGCAAG ACGTGGGAAT GAATTTGATC ATAAGAAGTC 000400 000401 CTTGGAGAAG TATTTGCGGA ATTACGAAAC TTTTTTAAAC TACATTGGAG AGTAAAAATA ACCTTCAGCT TGGATTGAGC 000480 000481 CACCAAAGTC CTTGGCACTG TCAAATGGTT CAACGTCAGA AATGGATATG GATTTATAAA TCGAAATG |
Predicted Small Protein
Name | NONHSAT026897_smProtein_104:307 |
Length | 68 |
Molecular weight | 7221.3493 |
Aromaticity | 0.0597014925373 |
Instability index | 79.0582089552 |
Isoelectric point | 8.78753662109 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0261732320556 |
Amino acid sequence | MGMGKTPCSCWPHASKEMLQSSPGNLGLSPTSSSPSLCPRLQTAIQCPPMATRFPLPGLW ERTWCSS |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLHHHLEELLLLLLLLLLLLLL EEEEELL |
PRMN | - |
PiMo | - |