Difference between revisions of "NONHSAT027153"
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sequence = <dnaseq>GTTTTGTTGCCTTTTAAAGGGAGAGGAAAGCAAACCACAGGCTATTTTATTATGAGCCTTCAAAAGGGAGGGGGTAAAAACTAGTTATCAATGTTGTGCCTTTATTCTTTATGAAGAAAAACAAAATTTAGCTTAAATACTCATGGGGGGGGTGCTTTGATTTTTTTTTTAAAACTAGAGCTAGATTAAAACTGATGGTGAAGAGAAGAAAAAAAGTTTTTTGTAGTTCAACAATTGAATATTTCTTGGCTCTTAAACATTTCAGAGAAGCGCTACAAAGCAGCCACTGTGCTTACTGAACGGCCTCCCCCTGTATCGCTTAATTGAGAAGGTATACAAATGCTCTCAGTCCAGCCAGACACCAAGCCGAAAGGTTGTGCTGGCTGCAACCGAAAGATCAAGGACCGGTATCTTCTAAAGGCACTGGACAAATACTGGCATGAAGACTGCCTGAAGTGTGCCTGCTGTGACTGTCGCTTGGGAGAGGCTCTTTGGTGTAACGGGAAACTGCGCTGCCTGTAGTAAGCTCATCCCTGCCTTTGAGATGGTG</dnaseq>| | sequence = <dnaseq>GTTTTGTTGCCTTTTAAAGGGAGAGGAAAGCAAACCACAGGCTATTTTATTATGAGCCTTCAAAAGGGAGGGGGTAAAAACTAGTTATCAATGTTGTGCCTTTATTCTTTATGAAGAAAAACAAAATTTAGCTTAAATACTCATGGGGGGGGTGCTTTGATTTTTTTTTTAAAACTAGAGCTAGATTAAAACTGATGGTGAAGAGAAGAAAAAAAGTTTTTTGTAGTTCAACAATTGAATATTTCTTGGCTCTTAAACATTTCAGAGAAGCGCTACAAAGCAGCCACTGTGCTTACTGAACGGCCTCCCCCTGTATCGCTTAATTGAGAAGGTATACAAATGCTCTCAGTCCAGCCAGACACCAAGCCGAAAGGTTGTGCTGGCTGCAACCGAAAGATCAAGGACCGGTATCTTCTAAAGGCACTGGACAAATACTGGCATGAAGACTGCCTGAAGTGTGCCTGCTGTGACTGTCGCTTGGGAGAGGCTCTTTGGTGTAACGGGAAACTGCGCTGCCTGTAGTAAGCTCATCCCTGCCTTTGAGATGGTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG010601]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG010601]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:55, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT027153 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
550 nt |
| Genomic location |
chr12-:16713409..16760858 |
| Exon number |
4 |
| Exons |
16713409..16713472,16753648..16753802,16759000..16759066,16760595..16760858 |
| Genome context |
|
| Sequence |
000001 GTTTTGTTGC CTTTTAAAGG GAGAGGAAAG CAAACCACAG GCTATTTTAT TATGAGCCTT CAAAAGGGAG GGGGTAAAAA 000080
000081 CTAGTTATCA ATGTTGTGCC TTTATTCTTT ATGAAGAAAA ACAAAATTTA GCTTAAATAC TCATGGGGGG GGTGCTTTGA 000160 000161 TTTTTTTTTT AAAACTAGAG CTAGATTAAA ACTGATGGTG AAGAGAAGAA AAAAAGTTTT TTGTAGTTCA ACAATTGAAT 000240 000241 ATTTCTTGGC TCTTAAACAT TTCAGAGAAG CGCTACAAAG CAGCCACTGT GCTTACTGAA CGGCCTCCCC CTGTATCGCT 000320 000321 TAATTGAGAA GGTATACAAA TGCTCTCAGT CCAGCCAGAC ACCAAGCCGA AAGGTTGTGC TGGCTGCAAC CGAAAGATCA 000400 000401 AGGACCGGTA TCTTCTAAAG GCACTGGACA AATACTGGCA TGAAGACTGC CTGAAGTGTG CCTGCTGTGA CTGTCGCTTG 000480 000481 GGAGAGGCTC TTTGGTGTAA CGGGAAACTG CGCTGCCTGT AGTAAGCTCA TCCCTGCCTT TGAGATGGTG |
Predicted Small Protein
| Name | NONHSAT027153_smProtein_194:298 |
| Length | 35 |
| Molecular weight | 4078.7862 |
| Aromaticity | 0.147058823529 |
| Instability index | 74.0147058824 |
| Isoelectric point | 9.78326416016 |
| Runs | 6 |
| Runs residual | 0.00967982129561 |
| Runs probability | 0.00662427133014 |
| Amino acid sequence | MVKRRKKVFCSSTIEYFLALKHFREALQSSHCAY |
| Secondary structure | LLLHHHHEELLLHHHHHHHHHHHHHHHHHHLLLL |
| PRMN | - |
| PiMo | - |
