Difference between revisions of "NONHSAT030159"
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sequence = <dnaseq>CATCTGAGCAAAAGACTCTGGCCAATCTACCGTGGATTGTGGAGCCGGGCCAAGAAGCCAAGAGGGGCATTAATACCAAGTATGAAACCACGATTTTCTGATACTCGCCGTCCTCCTGTCCTCGCGGTGCCTTGCTCGCCAAGCGGTCCCGGAGCAGGCTTTCCTTCGCGCCTCCGCGTCCACCCAGCCCAGGAGGAAGACTGCTCTGAGCGTGCGGCCTTGTTACGGGCGAAAGGCCACTGGCCATTCCTGGGGAAGTTCTTTCTGCACCAGTGATGGAAAACGCAAGACTTTCCAGTCGCAACCCCTGAGAGGCGATCTTCTTCATGCCAGCCATACCGGGCAGGAACCATCAGAGAGACACACTGAGGAGGCACTCAGAAAATTTTGATAGAATTGAATTTACATATAGCTGATAAAGCCTAAATAGAAA</dnaseq>| | sequence = <dnaseq>CATCTGAGCAAAAGACTCTGGCCAATCTACCGTGGATTGTGGAGCCGGGCCAAGAAGCCAAGAGGGGCATTAATACCAAGTATGAAACCACGATTTTCTGATACTCGCCGTCCTCCTGTCCTCGCGGTGCCTTGCTCGCCAAGCGGTCCCGGAGCAGGCTTTCCTTCGCGCCTCCGCGTCCACCCAGCCCAGGAGGAAGACTGCTCTGAGCGTGCGGCCTTGTTACGGGCGAAAGGCCACTGGCCATTCCTGGGGAAGTTCTTTCTGCACCAGTGATGGAAAACGCAAGACTTTCCAGTCGCAACCCCTGAGAGGCGATCTTCTTCATGCCAGCCATACCGGGCAGGAACCATCAGAGAGACACACTGAGGAGGCACTCAGAAAATTTTGATAGAATTGAATTTACATATAGCTGATAAAGCCTAAATAGAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG012038]] | + | [[Category:Sense]][[Category:NONHSAG012038]][[Category:Transcripts]] |
Latest revision as of 21:09, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT030159 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
433 nt |
| Genomic location |
chr12-:99129296..99139617 |
| Exon number |
2 |
| Exons |
99129296..99129412,99139302..99139617 |
| Genome context |
|
| Sequence |
000001 CATCTGAGCA AAAGACTCTG GCCAATCTAC CGTGGATTGT GGAGCCGGGC CAAGAAGCCA AGAGGGGCAT TAATACCAAG 000080
000081 TATGAAACCA CGATTTTCTG ATACTCGCCG TCCTCCTGTC CTCGCGGTGC CTTGCTCGCC AAGCGGTCCC GGAGCAGGCT 000160 000161 TTCCTTCGCG CCTCCGCGTC CACCCAGCCC AGGAGGAAGA CTGCTCTGAG CGTGCGGCCT TGTTACGGGC GAAAGGCCAC 000240 000241 TGGCCATTCC TGGGGAAGTT CTTTCTGCAC CAGTGATGGA AAACGCAAGA CTTTCCAGTC GCAACCCCTG AGAGGCGATC 000320 000321 TTCTTCATGC CAGCCATACC GGGCAGGAAC CATCAGAGAG ACACACTGAG GAGGCACTCA GAAAATTTTG ATAGAATTGA 000400 000401 ATTTACATAT AGCTGATAAA GCCTAAATAG AAA |
Predicted Small Protein
| Name | NONHSAT030159_smProtein_326:415 |
| Length | 30 |
| Molecular weight | 3544.8712 |
| Aromaticity | 0.103448275862 |
| Instability index | 80.8275862069 |
| Isoelectric point | 8.53045654297 |
| Runs | 5 |
| Runs residual | 0.0271551724138 |
| Runs probability | 0.0394629924042 |
| Amino acid sequence | MPAIPGRNHQRDTLRRHSENFDRIEFTYS |
| Secondary structure | LLLLLLLLLLHHHHHHHHLLLLEEEEEEL |
| PRMN | - |
| PiMo | - |
