Difference between revisions of "NONHSAT063955"
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sequence = <dnaseq>tgacatgtgactttatctggcaacagagtgagttgttgctcccgcctgagcccagcccccagaaaggattgtgacatatcgttggacccagaattgaggtaatgtaactattccactgccttggcactgcccacagaagacattgtgacatattgctgggtcttgtacccaggtggtgtgaatcttctctcctgccttggctcttccacagggggcattgtgtcatatcgctgggccccacacataggttatgtgactcttctgcctgtgccctgcccatgtggcccattgtgacatactgttgggtcccaaacctaggtgatgtaactctactgcttaggccctgcctacagaggacattgtgacatatccctgcatccatcacacaggtgcagttttgacacacttctgtctagcagctgag</dnaseq>| | sequence = <dnaseq>tgacatgtgactttatctggcaacagagtgagttgttgctcccgcctgagcccagcccccagaaaggattgtgacatatcgttggacccagaattgaggtaatgtaactattccactgccttggcactgcccacagaagacattgtgacatattgctgggtcttgtacccaggtggtgtgaatcttctctcctgccttggctcttccacagggggcattgtgtcatatcgctgggccccacacataggttatgtgactcttctgcctgtgccctgcccatgtggcccattgtgacatactgttgggtcccaaacctaggtgatgtaactctactgcttaggccctgcctacagaggacattgtgacatatccctgcatccatcacacaggtgcagttttgacacacttctgtctagcagctgag</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG025369]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG025369]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 22:52, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT063955 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
424 nt |
| Genomic location |
chr19+:24232253..24240767 |
| Exon number |
2 |
| Exons |
24232253..24232641,24240733..24240767 |
| Genome context |
|
| Sequence |
000001 tgacatgtga ctttatctgg caacagagtg agttgttgct cccgcctgag cccagccccc agaaaggatt gtgacatatc 000080
000081 gttggaccca gaattgaggt aatgtaacta ttccactgcc ttggcactgc ccacagaaga cattgtgaca tattgctggg 000160 000161 tcttgtaccc aggtggtgtg aatcttctct cctgccttgg ctcttccaca gggggcattg tgtcatatcg ctgggcccca 000240 000241 cacataggtt atgtgactct tctgcctgtg ccctgcccat gtggcccatt gtgacatact gttgggtccc aaacctaggt 000320 000321 gatgtaactc tactgcttag gccctgccta cagaggacat tgtgacatat ccctgcatcc atcacacagg tgcagttttg 000400 000401 acacacttct gtctagcagc tgag |
Predicted Small Protein
| Name | NONHSAT063955_smProtein_278:364 |
| Length | 29 |
| Molecular weight | 3301.9855 |
| Aromaticity | 0.107142857143 |
| Instability index | 42.4357142857 |
| Isoelectric point | 7.82183837891 |
| Runs | 7 |
| Runs residual | 0.0467806841046 |
| Runs probability | 0.0347364170894 |
| Amino acid sequence | MWPIVTYCWVPNLGDVTLLLRPCLQRTL |
| Secondary structure | LLLEEEEEELLLLLLEEEEELHHHHLLL |
| PRMN | - |
| PiMo | - |
