Difference between revisions of "NONHSAT065949"
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sequence = <dnaseq>AAATTGGAGGGGACGCTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCAGGCTGATTCCTGAGTTCTTGGGTTGGGACTGCCCCCTTCCACCAAATTCATTCTTACTGTCAGAGTCCATTCTGGAATGGCACTGGTCCCTTGACTTTAGACCCTGACCTGTCTGAGGACATCCTGAGCCTGTCTCCAGGCATAGGGGTTGCTCTGTGATGATATGTCCTCTGTGTGGGTTGAAGGGCCACACCTTCAGGGGGTCTTTCTATCCTAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAAGTTACAGAACTGGGGGGGGCCCTCAGGACCCCATTGCCTTCCCCAGGTGGGCTT</dnaseq>| | sequence = <dnaseq>AAATTGGAGGGGACGCTGGTGGACGGATTGGGTGCAAGGAGTTGGTGTTGATGGAGGAGCAGGACGCCAGAGTCCCAGCCCTGGAACCGTTCAGAGTGGAGCAGGTTGTCAGAACTCAGGGTGCAGAGGGTGAAGGAGGCAGGCTGATTCCTGAGTTCTTGGGTTGGGACTGCCCCCTTCCACCAAATTCATTCTTACTGTCAGAGTCCATTCTGGAATGGCACTGGTCCCTTGACTTTAGACCCTGACCTGTCTGAGGACATCCTGAGCCTGTCTCCAGGCATAGGGGTTGCTCTGTGATGATATGTCCTCTGTGTGGGTTGAAGGGCCACACCTTCAGGGGGTCTTTCTATCCTAGGCACCACCTGTAATCTACTATGTCCCTGACTTCATCTCCAAAGAAGAGGAGGAGTATTTGCTTCGACAGGTTTTTAATGCCCCAAAGCCAAAGTGGACCCAGCTCTCTGGGAGAAAGTTACAGAACTGGGGGGGGCCCTCAGGACCCCATTGCCTTCCCCAGGTGGGCTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG025631]] | + | [[Category:Sense]][[Category:NONHSAG025631]][[Category:Transcripts]] |
Latest revision as of 22:54, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT065949 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
528 nt |
| Genomic location |
chr19-:36501940..36505101 |
| Exon number |
4 |
| Exons |
36501940..36501979,36502306..36502366,36503923..36504324,36505077..36505101 |
| Genome context |
|
| Sequence |
000001 AAATTGGAGG GGACGCTGGT GGACGGATTG GGTGCAAGGA GTTGGTGTTG ATGGAGGAGC AGGACGCCAG AGTCCCAGCC 000080
000081 CTGGAACCGT TCAGAGTGGA GCAGGTTGTC AGAACTCAGG GTGCAGAGGG TGAAGGAGGC AGGCTGATTC CTGAGTTCTT 000160 000161 GGGTTGGGAC TGCCCCCTTC CACCAAATTC ATTCTTACTG TCAGAGTCCA TTCTGGAATG GCACTGGTCC CTTGACTTTA 000240 000241 GACCCTGACC TGTCTGAGGA CATCCTGAGC CTGTCTCCAG GCATAGGGGT TGCTCTGTGA TGATATGTCC TCTGTGTGGG 000320 000321 TTGAAGGGCC ACACCTTCAG GGGGTCTTTC TATCCTAGGC ACCACCTGTA ATCTACTATG TCCCTGACTT CATCTCCAAA 000400 000401 GAAGAGGAGG AGTATTTGCT TCGACAGGTT TTTAATGCCC CAAAGCCAAA GTGGACCCAG CTCTCTGGGA GAAAGTTACA 000480 000481 GAACTGGGGG GGGCCCTCAG GACCCCATTG CCTTCCCCAG GTGGGCTT |
Predicted Small Protein
| Name | NONHSAT065949_smProtein_50:247 |
| Length | 66 |
| Molecular weight | 7479.335 |
| Aromaticity | 0.107692307692 |
| Instability index | 57.3138461538 |
| Isoelectric point | 4.36846923828 |
| Runs | 7 |
| Runs residual | 0.0425961538462 |
| Runs probability | 0.0341181517652 |
| Amino acid sequence | MEEQDARVPALEPFRVEQVVRTQGAEGEGGRLIPEFLGWDCPLPPNSFLLSESILEWHWS LDFRP |
| Secondary structure | LLLLLLLLLLLLLLEEEEEEEELLLLLLLLEEELLLLLLLLLLLLLLLLLLHHHHHHHHH HLLLL |
| PRMN | - |
| PiMo | - |
