Difference between revisions of "NONHSAT070760"
| Line 42: | Line 42: | ||
sequence = <dnaseq>CTGGAGGGGCTGTGTCTGGGGAGATGCTTCTCTATAAAAAGCTTAGAGAGAGTTGTCATCGAAAATAACAAGACTATTCTGGATATGAGTAACACTGAGGAATAAGATACTAAGCCATTAAAGAAGGGTATAAAAATTATGTCTGACACAGGATATGGAGAGAAATATGATGAAGATGAAATATGACAACAGAATCAAGagatggtattttgccatgttacccaggctggtctcaaaatcctggaatcaagcgatccacctgccttggcctcccaacgtgctgggattatagctgtgatccaccgtggccagccCAAGAAGTCTTTAGCATACTCTGccaccagactaaatcaggttcgccatgttgcccaagctggtcccgaactcctgacctcaagtgatttgcccaccttcgcctctca</dnaseq>| | sequence = <dnaseq>CTGGAGGGGCTGTGTCTGGGGAGATGCTTCTCTATAAAAAGCTTAGAGAGAGTTGTCATCGAAAATAACAAGACTATTCTGGATATGAGTAACACTGAGGAATAAGATACTAAGCCATTAAAGAAGGGTATAAAAATTATGTCTGACACAGGATATGGAGAGAAATATGATGAAGATGAAATATGACAACAGAATCAAGagatggtattttgccatgttacccaggctggtctcaaaatcctggaatcaagcgatccacctgccttggcctcccaacgtgctgggattatagctgtgatccaccgtggccagccCAAGAAGTCTTTAGCATACTCTGccaccagactaaatcaggttcgccatgttgcccaagctggtcccgaactcctgacctcaagtgatttgcccaccttcgcctctca</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG027792]] | + | [[Category:Intergenic]][[Category:NONHSAG027792]][[Category:Transcripts]] |
Latest revision as of 23:19, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT070760 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
422 nt |
| Genomic location |
chr2-:55283619..55339703 |
| Exon number |
4 |
| Exons |
55283619..55283693,55287742..55287889,55307625..55307775,55339656..55339703 |
| Genome context |
|
| Sequence |
000001 CTGGAGGGGC TGTGTCTGGG GAGATGCTTC TCTATAAAAA GCTTAGAGAG AGTTGTCATC GAAAATAACA AGACTATTCT 000080
000081 GGATATGAGT AACACTGAGG AATAAGATAC TAAGCCATTA AAGAAGGGTA TAAAAATTAT GTCTGACACA GGATATGGAG 000160 000161 AGAAATATGA TGAAGATGAA ATATGACAAC AGAATCAAGa gatggtattt tgccatgtta cccaggctgg tctcaaaatc 000240 000241 ctggaatcaa gcgatccacc tgccttggcc tcccaacgtg ctgggattat agctgtgatc caccgtggcc agccCAAGAA 000320 000321 GTCTTTAGCA TACTCTGcca ccagactaaa tcaggttcgc catgttgccc aagctggtcc cgaactcctg acctcaagtg 000400 000401 atttgcccac cttcgcctct ca |
Predicted Small Protein
| Name | NONHSAT070760_smProtein_182:400 |
| Length | 73 |
| Molecular weight | 8019.0498 |
| Aromaticity | 0.0972222222222 |
| Instability index | 76.1083333333 |
| Isoelectric point | 6.50103759766 |
| Runs | 8 |
| Runs residual | 0.0298053527981 |
| Runs probability | 0.0392267267268 |
| Amino acid sequence | MTTESRDGILPCYPGWSQNPGIKRSTCLGLPTCWDYSCDPPWPAQEVFSILCHQTKSGSP CCPSWSRTPDLK |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLEEELLLLLLLLHHHHHEEEEEELLLLLL LLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
