Difference between revisions of "NONHSAT084857"

Latest revision as of 00:18, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	NONHSAT084857
Source	NONCODE4.0
Same with	,
Classification	sense
Length	3093 nt
Genomic location	chr22+:31556194..31602999
Exon number	6
Exons	31556194..31556289,31588670..31588688,31591455..31591567,31592922..31593143,31597484..31597601,31600475..31602999
Genome context
Sequence	000001 GTCGGAGGTC TTACCCAACA GATTGACGCG GCGTTAGTAT TGGCCGTGTA CCCGAAAAAC TGATTGACTG GGCTGGCGTT 000080 000081 AACTGTGCGG AGGCAGTTGG CCGTGTTTAC ATCAGTGGTT GGAGACCAGA CCTAACAGAC AGGTGTGTCC TGTTTGCAAA 000160 000161 GCTGGCATCA GCCGAGACAA GGTCATCCCC CTCTATGGAA GGGGCAGCAC TGGGCAACAG GACCCCAGAG AGAAGACCCC 000240 000241 TCCTCGTCCT CAAGGACAGA GGCCAGAGCC GGAGAATAGA GGGGTGAGGA ACATTCTAGG AGAAGCTTCT ACAAATGAGC 000320 000321 TGATGGCTTT AGAAGTTTCC TTCTTAGCCT TACAAttttt ctccttgatt ataaaagtaa aggaaaactt gtaaaataca 000400 000401 gaaaggaaaa gagggggaaa aaaatcactt ataaccacac caatccagag GGATTTCAAG GATTTGGATT TGGAGATGGT 000480 000481 GGCTTCCAGA TGTCTTTTGG AATTGGGGCA TTTCCCTTTG GGATATTTGC CACAGCATTT AATATAAATG ATGGGCGGCC 000560 000561 TCCTCCAGCT GTCCCTGGGA CACCCCAGTA TGTGGACGAG CAGTTCCTGT CACGCCTCTT CCTATTTGTG GCCCTGGTGA 000640 000641 TCATGTTCTG GCTCCTGATT GCCTAATGCT GGGCTCCTGC CTACATCCGT GGCAGGGCTC TGGACTGGTG ACGTGCCACC 000720 000721 CCAACTCCTG GTGTTTGGCT TCCTGGCTAA TCTTGACTCC TGGAATCAGT GGGATCAGTA ACACATCAAG GAGTCTTGTT 000800 000801 TCTTCATCAG AGCTTTGGAA CTCGAGACCA GTTGGCGATG ACCCCTGAAT ATCGCCACCG CTGTAAACAC TCTATAACTT 000880 000881 CAGGCCTTGG CATTGAGTCA TCTCTCATGG GTGACACCAT GAAATCTTGT TTCAGCCAGT TCTGCAGGTC CTGACTCTGC 000960 000961 AGAGGGAAGA GGCAGAAAGA GAGAAACTGT CAGAGTATAA TTTCACCTGA GTTTAATATT ACAGAAACAA AGGGATGCAC 001040 001041 CAAATGGTAT TTCTGGAAAT TTTCATGTCT TTAAATACCC CTTGGTAAGT TGCTTCTGAA GCCAGTGGGG GCTCCTCAGA 001120 001121 TAGAGAGGTT CCCCTTTCAA ATCCCAGTGC CGCTCTGTTC TCTTTCCTTC CCCTCCCACT CCCCCTCTTC TTCCTCTGTA 001200 001201 GAGATGCAAG AAATTGCTGT CCCATAAAAA TCATAATTGC AGTAGCTAAA GCTGGGGTCA CTTCGTGAAT TCACCAGAGA 001280 001281 CTCAAAGATC TTTTATTGGC TCTGGGCTGT GCTCAGTGTC TTTGGCCTCA GAGAACAACT TGAATGACTT CCTGGTTTCC 001360 001361 TGGCATAAAT TATTCCTGGT GAGACATGTG GCTTAACTCA CAGGTTTCCC ATCAGCTTTC TCCCTAAAAC TATGTTCATC 001440 001441 TGCCTCTCTC TGCCAGAGAA CATACAGCCG AGAATACTGC CGAAGCTGAG ACTGACTACT GTGCATTAGG AAAGACCTGG 001520 001521 AGTCAGGACT TTGGTGGGAT TTGGAGCTCC GAGGCAGTAA TAACTGAACA AGCAGCCCTG TCCCCTAGGC TGCAGAAGCT 001600 001601 TGAATGCATC CTCTCCCAGA ACCTGCCACA GGAAACTGGG GGCTTTGTCA GGTCAGCCCA ACTGCATGCA AAAGACCACC 001680 001681 ATCCTCAGAA GCCAAGTTGT CTTTTATGAA GAGGCAAGGA AAGGGGAAAC CCACATGTGA CCCTGATTTT GGTATGGCTT 001760 001761 GATAGAGTTC CCTGAAAACT CCTTGTATGT GTGCTAAAAC CAGGGAAGCA TGTGACTGCC AAGCAGGCAA CCCCTGATGA 001840 001841 TTTGTAAAGC CAGGTGGCAG GGCCTTGGGG AGCCCCAGCA CAATGATATT GTGTGGTCTT CCCTCCTGTG GAATCGAGGG 001920 001921 GAAATTATTC TTCCCAATAC CTTGATTTGA T

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GTCGGAGGTCTTACCCAACAGATTGACGCGGCGTTAGTATTGGCCGTGTACCCGAAAAACTGATTGACTGGGCTGGCGTTAACTGTGCGGAGGCAGTTGGCCGTGTTTACATCAGTGGTTGGAGACCAGACCTAACAGACAGGTGTGTCCTGTTTGCAAAGCTGGCATCAGCCGAGACAAGGTCATCCCCCTCTATGGAAGGGGCAGCACTGGGCAACAGGACCCCAGAGAGAAGACCCCTCCTCGTCCTCAAGGACAGAGGCCAGAGCCGGAGAATAGAGGGGTGAGGAACATTCTAGGAGAAGCTTCTACAAATGAGCTGATGGCTTTAGAAGTTTCCTTCTTAGCCTTACAAtttttctccttgattataaaagtaaaggaaaacttgtaaaatacagaaaggaaaagagggggaaaaaaatcacttataaccacaccaatccagagGGATTTCAAGGATTTGGATTTGGAGATGGTGGCTTCCAGATGTCTTTTGGAATTGGGGCATTTCCCTTTGGGATATTTGCCACAGCATTTAATATAAATGATGGGCGGCCTCCTCCAGCTGTCCCTGGGACACCCCAGTATGTGGACGAGCAGTTCCTGTCACGCCTCTTCCTATTTGTGGCCCTGGTGATCATGTTCTGGCTCCTGATTGCCTAATGCTGGGCTCCTGCCTACATCCGTGGCAGGGCTCTGGACTGGTGACGTGCCACCCCAACTCCTGGTGTTTGGCTTCCTGGCTAATCTTGACTCCTGGAATCAGTGGGATCAGTAACACATCAAGGAGTCTTGTTTCTTCATCAGAGCTTTGGAACTCGAGACCAGTTGGCGATGACCCCTGAATATCGCCACCGCTGTAAACACTCTATAACTTCAGGCCTTGGCATTGAGTCATCTCTCATGGGTGACACCATGAAATCTTGTTTCAGCCAGTTCTGCAGGTCCTGACTCTGCAGAGGGAAGAGGCAGAAAGAGAGAAACTGTCAGAGTATAATTTCACCTGAGTTTAATATTACAGAAACAAAGGGATGCACCAAATGGTATTTCTGGAAATTTTCATGTCTTTAAATACCCCTTGGTAAGTTGCTTCTGAAGCCAGTGGGGGCTCCTCAGATAGAGAGGTTCCCCTTTCAAATCCCAGTGCCGCTCTGTTCTCTTTCCTTCCCCTCCCACTCCCCCTCTTCTTCCTCTGTAGAGATGCAAGAAATTGCTGTCCCATAAAAATCATAATTGCAGTAGCTAAAGCTGGGGTCACTTCGTGAATTCACCAGAGACTCAAAGATCTTTTATTGGCTCTGGGCTGTGCTCAGTGTCTTTGGCCTCAGAGAACAACTTGAATGACTTCCTGGTTTCCTGGCATAAATTATTCCTGGTGAGACATGTGGCTTAACTCACAGGTTTCCCATCAGCTTTCTCCCTAAAACTATGTTCATCTGCCTCTCTCTGCCAGAGAACATACAGCCGAGAATACTGCCGAAGCTGAGACTGACTACTGTGCATTAGGAAAGACCTGGAGTCAGGACTTTGGTGGGATTTGGAGCTCCGAGGCAGTAATAACTGAACAAGCAGCCCTGTCCCCTAGGCTGCAGAAGCTTGAATGCATCCTCTCCCAGAACCTGCCACAGGAAACTGGGGGCTTTGTCAGGTCAGCCCAACTGCATGCAAAAGACCACCATCCTCAGAAGCCAAGTTGTCTTTTATGAAGAGGCAAGGAAAGGGGAAACCCACATGTGACCCTGATTTTGGTATGGCTTGATAGAGTTCCCTGAAAACTCCTTGTATGTGTGCTAAAACCAGGGAAGCATGTGACTGCCAAGCAGGCAACCCCTGATGATTTGTAAAGCCAGGTGGCAGGGCCTTGGGGAGCCCCAGCACAATGATATTGTGTGGTCTTCCCTCCTGTGGAATCGAGGGGAAATTATTCTTCCCAATACCTTGATTTGATTTTCAGTTTCATAAGCTTCTTCCTCTGAATCTTATTGAGGGACTATGGTACCAAGCAGGTAGGActgttcacctggtggaacagttcttgctctgccttctaggcttcatcccagaaatccagcctctttctggagaccccaaagctggagggagatgggctttcctctgggcctctctcctactttgccatccACACTGCTCCTGGCTAACCCCAGCAATAACCAACAAATGGTAGGAAGCCCCATCTATTGCTTTTTCTCAATTATGACTGCATAGTTTATGGAAACAAAGATCTTGAGGAAGATGAGGGAAGCCCTCCCCTCTTCACAGTCCCCATCTCTTCTCCTTTGTACCTGTCAACACCAGAGTTCAGTGTTTAAACAGACAAAATATAAAGTATTGAGTAGGTGGTTCATATGCCGAATCCACTTGGTAGGAAGAAACCACCAGCTTTATAGTGTGCCTGATAGATTTTAAACATTCCTGGGCACCCACTCAAGAGTGCTCTTTTTATCACCTTCTGGAAATCCGCAAAGTTGCAGGGGCCTCTGGAGTGTCTCTTCTCTAGAGAGAATTGGTGGGACCCCCCTCAGTGCAGTGGCCCCAACTAGTGGAGGGAGAGAGGACTTAAGTCAGATGGACTCAACAGAAATGGGTTTCCAGAAGAATAATGAAAAGTTGTGGGTAGGAAAATGAATCATTTGGACTCTTCAATGAAATGGAGTGAGCCCAGGAGAGCTCAGCCAACAGAGGCACTCTGGGAACCTGTTAGTAAAGCCAGGCTGGCCAAATGCCATTTGATTTTGAACCTCGTAGGTCCCCACTCACCCTCTGCCAGGAGCTAAGTAAGGCAGGAGAGCTGACTTGGGACTCCTGGCTCGGCCCCAACAGGGAGCCCCCTTCCCACCATCCCTCGGCAAGCTCACCACCTCATCCTTCTGCCAAGGCAGCTTTCCTTTCTTTTGTGTGTTTTCTGTGTTCTTAGCCTCCACCCTCCTCCTGCCACCCTTGTGGACTAGGACCAGGTCCTGACCCCAGTCAGAAAATGATGATATGTACAGTGGCACACCTTAACCAGTCACTAATTTTCACTGTTGTGAAAGTGATTTGATTTAGAATTAAACAAATGGTTTTACATTA</dnaseq>|
 }}
-[[Category:Sense]][[Category:NONHSAG033702]][[Category:Transcripts]]
+[[Category:Sense]][[Category:NONHSAG033702]][[Category:Transcripts]][[Category:Transcripts]]