Difference between revisions of "NONHSAT092895"

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sequence = <dnaseq>CTTGGTTGACACTGCTTTTATTGTGGATAAAGGAGAGATGGTCAGTAATTAATGGCTTGAAGTATTATTGGAGTGGTTTATCATTTCTGAAACTAATCGTGTCAGAATTGACTTTGAAAAGCATTGCTTTTTACAGAAATATATTAACTTTTTAGGAGTAATTTCTAGTTTGGATTGTAATATGAAATAATTTAAAAGGGCTTCGCTCATATATAGGAAAATCGCATATGGTCCTAGTATTAAATTCTTATTGCTTACTGATTTTTTTGAGTTAAGAGTTGTTATATGCTAGAATATGAGGATGTGAATATAAATAAGAGAAGAAAAAAGAATAAAGTAGATTGAGTCTCCAATTTTATGTAAGCTTCAGAAGAACTGGTTTGTTTACATGCAAGCTTATAGTTGAAATATTTTTCAGGAATTACATGAATGACAGTCTTCGAACCAATGTGTTTGTTCGATTTCAACCAGAGACTATAGCATGTGCTTGCATCTACCTTGCAGCTAGAGCACTTCAGGTAGGTGTATATTTCCCATTTTGTTCTGTAGGATAAATCACACAAATTTTCGGTGGTTCCAATACAGATTTAGCAAAAATTTAATTTAAAACATTCTGTTCTTATGGTTTAGATTCCGTTGCCAACTCGTCCCCATTGGTTTCTTCTTTTTGGTACTACAGAAGAGGAAATCCAGGAAATCTGCATAGAAACACTTAGGCTTTATACCAGAAAAAAGCCAAACTATGAATTACTGGAAAAAGAAGTAGAAAAAA</dnaseq>|
 
sequence = <dnaseq>CTTGGTTGACACTGCTTTTATTGTGGATAAAGGAGAGATGGTCAGTAATTAATGGCTTGAAGTATTATTGGAGTGGTTTATCATTTCTGAAACTAATCGTGTCAGAATTGACTTTGAAAAGCATTGCTTTTTACAGAAATATATTAACTTTTTAGGAGTAATTTCTAGTTTGGATTGTAATATGAAATAATTTAAAAGGGCTTCGCTCATATATAGGAAAATCGCATATGGTCCTAGTATTAAATTCTTATTGCTTACTGATTTTTTTGAGTTAAGAGTTGTTATATGCTAGAATATGAGGATGTGAATATAAATAAGAGAAGAAAAAAGAATAAAGTAGATTGAGTCTCCAATTTTATGTAAGCTTCAGAAGAACTGGTTTGTTTACATGCAAGCTTATAGTTGAAATATTTTTCAGGAATTACATGAATGACAGTCTTCGAACCAATGTGTTTGTTCGATTTCAACCAGAGACTATAGCATGTGCTTGCATCTACCTTGCAGCTAGAGCACTTCAGGTAGGTGTATATTTCCCATTTTGTTCTGTAGGATAAATCACACAAATTTTCGGTGGTTCCAATACAGATTTAGCAAAAATTTAATTTAAAACATTCTGTTCTTATGGTTTAGATTCCGTTGCCAACTCGTCCCCATTGGTTTCTTCTTTTTGGTACTACAGAAGAGGAAATCCAGGAAATCTGCATAGAAACACTTAGGCTTTATACCAGAAAAAAGCCAAACTATGAATTACTGGAAAAAGAAGTAGAAAAAA</dnaseq>|
 
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[[Category:Sense]][[Category:NONHSAG036490]]
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[[Category:Sense]][[Category:NONHSAG036490]][[Category:Transcripts]]

Latest revision as of 00:44, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT092895

Source

NONCODE4.0

Same with

,

Classification

sense

Length

772 nt

Genomic location

chr3-:156867730..156868588

Exon number

2

Exons

156867730..156867766,156867854..156868588

Genome context

Sequence
000001 CTTGGTTGAC ACTGCTTTTA TTGTGGATAA AGGAGAGATG GTCAGTAATT AATGGCTTGA AGTATTATTG GAGTGGTTTA 000080
000081 TCATTTCTGA AACTAATCGT GTCAGAATTG ACTTTGAAAA GCATTGCTTT TTACAGAAAT ATATTAACTT TTTAGGAGTA 000160
000161 ATTTCTAGTT TGGATTGTAA TATGAAATAA TTTAAAAGGG CTTCGCTCAT ATATAGGAAA ATCGCATATG GTCCTAGTAT 000240
000241 TAAATTCTTA TTGCTTACTG ATTTTTTTGA GTTAAGAGTT GTTATATGCT AGAATATGAG GATGTGAATA TAAATAAGAG 000320
000321 AAGAAAAAAG AATAAAGTAG ATTGAGTCTC CAATTTTATG TAAGCTTCAG AAGAACTGGT TTGTTTACAT GCAAGCTTAT 000400
000401 AGTTGAAATA TTTTTCAGGA ATTACATGAA TGACAGTCTT CGAACCAATG TGTTTGTTCG ATTTCAACCA GAGACTATAG 000480
000481 CATGTGCTTG CATCTACCTT GCAGCTAGAG CACTTCAGGT AGGTGTATAT TTCCCATTTT GTTCTGTAGG ATAAATCACA 000560
000561 CAAATTTTCG GTGGTTCCAA TACAGATTTA GCAAAAATTT AATTTAAAAC ATTCTGTTCT TATGGTTTAG ATTCCGTTGC 000640
000641 CAACTCGTCC CCATTGGTTT CTTCTTTTTG GTACTACAGA AGAGGAAATC CAGGAAATCT GCATAGAAAC ACTTAGGCTT 000720
000721 TATACCAGAA AAAAGCCAAA CTATGAATTA CTGGAAAAAG AAGTAGAAAA AA
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Predicted Small Protein

Name NONHSAT092895_smProtein_425:553
Length 43
Molecular weight 4672.4316
Aromaticity 0.142857142857
Instability index 54.3023809524
Isoelectric point 7.72100830078
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0356070356071
Amino acid sequence MNDSLRTNVFVRFQPETIACACIYLAARALQVGVYFPFCSVG
Secondary structure LLLLLLLLEEEELLLHHHHHHHHHHHHHHHLLLEEEEELLLL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo