Difference between revisions of "NONHSAT096142"

From LncRNAWiki
Jump to: navigation, search
 
Line 42: Line 42:
 
sequence = <dnaseq>ggaaaaatgaggaacagacaagttaaagcaggggtccccaaccccagggctgcagaccagtacctgtctgtggcctgttaggaactgggcagcacagcacgagCATGGGACATTCAGAACTGGGAAGGACTTAATACAGACTCATGAAAGTTCTTTAATCTTATCAAGACTATACTGTTGCCATCTGTGATACTGATaactagcctataatgagtgcctgctacgtgccaggcactgcgctaagaattttgcacacatgattgataatcactacattaataacaagTTTTAAGATAAAATTGGCTGCAGCATTGGCAAGATGTCGAATCAAGCATGATGCCCTTTCAATTTACCACATCCTTCCAGAAACAGTTAGGAAACAGGAACTAAGGGCCTCCACTTTACCACTTTATGCTTGGATAAATACTTGTAAAATCAGCCCTGAAGAAGTTTATAATAATTTGAAGAGAAGAGGCTATAATAAAGTCAAATCTGTATTGCATATTGATGATAAAGTCTTTGCTGTGGATCAACATTGCTATGATGTCTTAATTTTTCCATCTCATCTTAAAAATGATCTTATAAATATAGATCTTTTCAAAGATTACAAACTTATATTTCAGGACAAATCTCGAAGTCTTGCTGTCCATTCTGTAAAGGCTTTATTAAATATGGATGATGATGTCTTAATGGTCAATACAGGCTCATGGTACACAGTTTCCCACATGTCAATTTTAACAAATAATAATACCTCAAAAGTATT</dnaseq>|
 
sequence = <dnaseq>ggaaaaatgaggaacagacaagttaaagcaggggtccccaaccccagggctgcagaccagtacctgtctgtggcctgttaggaactgggcagcacagcacgagCATGGGACATTCAGAACTGGGAAGGACTTAATACAGACTCATGAAAGTTCTTTAATCTTATCAAGACTATACTGTTGCCATCTGTGATACTGATaactagcctataatgagtgcctgctacgtgccaggcactgcgctaagaattttgcacacatgattgataatcactacattaataacaagTTTTAAGATAAAATTGGCTGCAGCATTGGCAAGATGTCGAATCAAGCATGATGCCCTTTCAATTTACCACATCCTTCCAGAAACAGTTAGGAAACAGGAACTAAGGGCCTCCACTTTACCACTTTATGCTTGGATAAATACTTGTAAAATCAGCCCTGAAGAAGTTTATAATAATTTGAAGAGAAGAGGCTATAATAAAGTCAAATCTGTATTGCATATTGATGATAAAGTCTTTGCTGTGGATCAACATTGCTATGATGTCTTAATTTTTCCATCTCATCTTAAAAATGATCTTATAAATATAGATCTTTTCAAAGATTACAAACTTATATTTCAGGACAAATCTCGAAGTCTTGCTGTCCATTCTGTAAAGGCTTTATTAAATATGGATGATGATGTCTTAATGGTCAATACAGGCTCATGGTACACAGTTTCCCACATGTCAATTTTAACAAATAATAATACCTCAAAAGTATT</dnaseq>|
 
}}
 
}}
[[Category:Sense]][[Category:NONHSAG037816]]
+
[[Category:Sense]][[Category:NONHSAG037816]][[Category:Transcripts]]

Latest revision as of 00:57, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT096142

Source

NONCODE4.0

Same with

,

Classification

sense

Length

763 nt

Genomic location

chr4+:40764623..40778205

Exon number

5

Exons

40764623..40764725,40775073..40775255,40776282..40776434,40776784..40776967,40778066..40778205

Genome context

Sequence
000001 ggaaaaatga ggaacagaca agttaaagca ggggtcccca accccagggc tgcagaccag tacctgtctg tggcctgtta 000080
000081 ggaactgggc agcacagcac gagCATGGGA CATTCAGAAC TGGGAAGGAC TTAATACAGA CTCATGAAAG TTCTTTAATC 000160
000161 TTATCAAGAC TATACTGTTG CCATCTGTGA TACTGATaac tagcctataa tgagtgcctg ctacgtgcca ggcactgcgc 000240
000241 taagaatttt gcacacatga ttgataatca ctacattaat aacaagTTTT AAGATAAAAT TGGCTGCAGC ATTGGCAAGA 000320
000321 TGTCGAATCA AGCATGATGC CCTTTCAATT TACCACATCC TTCCAGAAAC AGTTAGGAAA CAGGAACTAA GGGCCTCCAC 000400
000401 TTTACCACTT TATGCTTGGA TAAATACTTG TAAAATCAGC CCTGAAGAAG TTTATAATAA TTTGAAGAGA AGAGGCTATA 000480
000481 ATAAAGTCAA ATCTGTATTG CATATTGATG ATAAAGTCTT TGCTGTGGAT CAACATTGCT ATGATGTCTT AATTTTTCCA 000560
000561 TCTCATCTTA AAAATGATCT TATAAATATA GATCTTTTCA AAGATTACAA ACTTATATTT CAGGACAAAT CTCGAAGTCT 000640
000641 TGCTGTCCAT TCTGTAAAGG CTTTATTAAA TATGGATGAT GATGTCTTAA TGGTCAATAC AGGCTCATGG TACACAGTTT 000720
000721 CCCACATGTC AATTTTAACA AATAATAATA CCTCAAAAGT ATT
[back to top]

Predicted Small Protein

Name NONHSAT096142_smProtein_209:259
Length 17
Molecular weight 1733.0636
Aromaticity 0.0625
Instability index 90.39375
Isoelectric point 7.99884033203
Runs 5
Runs residual 0.0104166666667
Runs probability 0.0109874580463
Amino acid sequence MSACYVPGTALRILHT
Secondary structure LLLEELLLHHHHHHLL
PRMN -
PiMo -