Difference between revisions of "NONHSAT096785"
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sequence = <dnaseq>TTACTCATCCCTAACTTTCTCCTAAAATTATGTAGAGACAATTATCACTATGTCATTCAAGTAAAGCTATTTATCATTTTGCTCCTTTAGGAATCTGCTCAAGTATCCACTGAAAACAATGAACTGACTAAGGAAGGAAGGATCTACTTAAAGCACATGGAATCTACCAGCATCTCCCAAGAAGAATCTGCTGAAGTATTCCCTGAGACGAAAACCAACCAGTTTCTCCAGAAGTTCACTGTCCCCCAGTATGTCCAGGCTGTTCCCCTTGTAGTCTATGAGCCTGTGGAATCACATTCAGGAAAACACCTACCCATATATTCCCATTTAGAAGAACATGTAAGATTCTTGAATTAACTGCTGCAATTTGAGCTTGAGTATGACTAGAAAAATCATTCCTTTATAATTTCTTCATCTACCACATCACCTCCTACTAGCAATATATTTTGGCATGCTTCTTGAAATGTCAACAGTATTGAGCCAAAAGAAGACTGTGTGGAACATTTTCCATATTGGTTATGATATTTTTAATTTGTGTTGGATATGCCAGATCTGAATTGTGGTATCATATTTACTGTATTGATGATTAAATGAGGTCTTTTCTCCACTATCTCTGAAATATAGAACTGTATATCAGTTGCCAAAACATTAAAATTTCAAACAAAGTTGTA</dnaseq>| | sequence = <dnaseq>TTACTCATCCCTAACTTTCTCCTAAAATTATGTAGAGACAATTATCACTATGTCATTCAAGTAAAGCTATTTATCATTTTGCTCCTTTAGGAATCTGCTCAAGTATCCACTGAAAACAATGAACTGACTAAGGAAGGAAGGATCTACTTAAAGCACATGGAATCTACCAGCATCTCCCAAGAAGAATCTGCTGAAGTATTCCCTGAGACGAAAACCAACCAGTTTCTCCAGAAGTTCACTGTCCCCCAGTATGTCCAGGCTGTTCCCCTTGTAGTCTATGAGCCTGTGGAATCACATTCAGGAAAACACCTACCCATATATTCCCATTTAGAAGAACATGTAAGATTCTTGAATTAACTGCTGCAATTTGAGCTTGAGTATGACTAGAAAAATCATTCCTTTATAATTTCTTCATCTACCACATCACCTCCTACTAGCAATATATTTTGGCATGCTTCTTGAAATGTCAACAGTATTGAGCCAAAAGAAGACTGTGTGGAACATTTTCCATATTGGTTATGATATTTTTAATTTGTGTTGGATATGCCAGATCTGAATTGTGGTATCATATTTACTGTATTGATGATTAAATGAGGTCTTTTCTCCACTATCTCTGAAATATAGAACTGTATATCAGTTGCCAAAACATTAAAATTTCAAACAAAGTTGTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG038138]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG038138]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 00:59, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096785 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
671 nt |
Genomic location |
chr4+:70939743..70951007 |
Exon number |
7 |
Exons |
70939743..70939856,70939941..70939985,70944471..70944494,70945444..70945467,70947180..70947303,70948398..70948443,70950714..70951007 |
Genome context |
|
Sequence |
000001 TTACTCATCC CTAACTTTCT CCTAAAATTA TGTAGAGACA ATTATCACTA TGTCATTCAA GTAAAGCTAT TTATCATTTT 000080
000081 GCTCCTTTAG GAATCTGCTC AAGTATCCAC TGAAAACAAT GAACTGACTA AGGAAGGAAG GATCTACTTA AAGCACATGG 000160 000161 AATCTACCAG CATCTCCCAA GAAGAATCTG CTGAAGTATT CCCTGAGACG AAAACCAACC AGTTTCTCCA GAAGTTCACT 000240 000241 GTCCCCCAGT ATGTCCAGGC TGTTCCCCTT GTAGTCTATG AGCCTGTGGA ATCACATTCA GGAAAACACC TACCCATATA 000320 000321 TTCCCATTTA GAAGAACATG TAAGATTCTT GAATTAACTG CTGCAATTTG AGCTTGAGTA TGACTAGAAA AATCATTCCT 000400 000401 TTATAATTTC TTCATCTACC ACATCACCTC CTACTAGCAA TATATTTTGG CATGCTTCTT GAAATGTCAA CAGTATTGAG 000480 000481 CCAAAAGAAG ACTGTGTGGA ACATTTTCCA TATTGGTTAT GATATTTTTA ATTTGTGTTG GATATGCCAG ATCTGAATTG 000560 000561 TGGTATCATA TTTACTGTAT TGATGATTAA ATGAGGTCTT TTCTCCACTA TCTCTGAAAT ATAGAACTGT ATATCAGTTG 000640 000641 CCAAAACATT AAAATTTCAA ACAAAGTTGT A |
Predicted Small Protein
Name | NONHSAT096785_smProtein_518:589 |
Length | 24 |
Molecular weight | 2824.2973 |
Aromaticity | 0.217391304348 |
Instability index | 71.4434782609 |
Isoelectric point | 4.74566650391 |
Runs | 6 |
Runs residual | 0.0331262939959 |
Runs probability | 0.0401136430548 |
Amino acid sequence | MIFLICVGYARSELWYHIYCIDD |
Secondary structure | LEEEEEELHHHHHHHHHEEEELL |
PRMN | - |
PiMo | - |