Difference between revisions of "NONHSAT105563"
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sequence = <dnaseq>GCGTGTGCTGGGGTGGCGACGCCACAGCCACTAACGCGTGTGCGGTGCGGGAGGACAAGGATGTCGGGCAGGGATGTCCTGCTTGGCACCTCAGGACAGAGCCCATGGTGGCTGGCGGCCCCTGGAATGTTCGGGACGCAGAACACTTCGTGCTTGGGAACTTCTCAGAGGTGGGGACGAGGGAGAGGAAGGCGCCTGGATGCCAGGAAGTCTCCATCTTGGACAGCTGGGTGGTATTTAAGAAGGTGGTATTTATTTTTGTCGACCATATTTTGCAGAGACTGGCAAGGATGAGATGATGCCTAAGAATATCCAACTGGAGATACTTAGTTGCTTTTGAATAGGTAATTTGCATGGAGCTCAGGAAGGAAAGATGAGAGGGTTTTAACTTTGTTGGTCGTTAAAAAAAATCAAGAATGTGACCTGTTTGTCACATACGGAATTGTTGGCCACGTTTTAGGAAGCAGTGTCAGTGACTACAGCATTCTGTTTGGAGTTTTATTGAAGATTTCATTCCATAGACACTTTGGAGCACTTATGTGTCAAGTGCTTGACAAGGCCAGGGTCAGCCGCTGTGCAGCCCCTGTAGCAGTTCCCAGGGACCCGGCAAAGCACCAGAGGGGGAGGATGTTGTGTGAGTATCGCTGGTAACCCTTCTCTCTCGCCTCCCTCGTGACTCCAGGTCACTCAAACTGGGCTCCAGAGAGTAAGAACCCCGAGtccaggggctggagaaatagctgtgaaaaccctgcactcatggagttttaattgtactagaggaggggtcagacaagtagaaagtatttatctggtagtgataacactactgttaggggttagggtgtgatggggcggggaattatttcaagcagcagttttggaagttctctttgaggaggtaacacctgagcagagatttgaatacagtgagggaagaaacgatgtgactgtatgggtaaagtgccttctaaagggagggaacagaaatgctgaccagagagaagtgtgcttggtgaactccaggcttggcaaggtcagtatgactggcgagggcctactgaacaaggaagactgcgagatgctgttgcaggagtaactacaggccttgaaggaaggaaatttggatttatttctgtgcctggaaatgattagatttgaaagagtgacatggctgggcacgttttgatagacgcactggtcagcttcaaagaaggcagacagtggtggggctagaggggatacaggaagaccaatgaggaggcaatgacagcagtccaCAATTACAAGTAGCCTCCCACAATTATATAACCTTTCCACAAGGCATTTGCTTTGAGAGCCTAATGATTCTAAGATATTGAAGGGTTTTGGGTGCTATGCTCAGGAGTTTGGATATTATTGTTTTCAGGAATTTAAGAATGATaatatgtattgagcactaactacatgttgggagtttttttgtttgagacacagtttcacttttgttgcccgggctggggtgcaatggcatgacctcggcttaccgcaagctccgcctcccgggttcaagcaattctcctgcctcagcctcccctgtagctgggactacatgcatgcgccatcacgcctggataattttgtacttttagtagagatggggtttccccaggttggtcaggctgaactcctgacttcaggtgatccgcccgcatcggccccctaaagtgctgggattacaggcatgagccactgcgcctggccatgttgggcacttttacaagcactttacattatctaatgcaaccaaaaactgaggtttgccctattaataaatgagaaaactgaggcactcatctgttaagtgccttgctcaggtcccaTGTCCTTGGAACCAGGAGTCCTTCTCCTGTTGATGTTGGAAGGTTCAAAAGTGCTCTTATTACTTGTCACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTTCCAGAACTGAAAACAGTAATAAAACCTTCATTTATCTGACCCATTTGTCCTGGTGATGCTGTAGTCTGTTAGGAGTACCTAACAGGTGCCCTTCCACAGCCAACTAAAAAACAAAACTATTCAAGCTGAAGAGAAGCAGTGAAACCTCTGATATGAAGCCTGACACACCCTTTGACTTTAGCCAGGACTCACACACTATATTGTTCTGAGTATTCACTGAGGAAGCCCCCGCTTCTGTCAAGGATTCTCATCAGGAACCAGTCTCCTCGGAGAAAGGAGGTTAAAACGTGGTCTGGAGAACCCCTTTCCCTTCTGCTCTATTAACTATGGATATGCAAATGAACACTTACATTTGACCAAGACCTCCATCACCAGTCTGCTTACGCTTCCCCAGGACAGTGGCTACGTGCCAGTAATTCCTGGTGTCCATTTGCTGAGCCCTGTTGGGACCCTTGAAGCGTGATATAATAAGGTCTTCCTTTAGCCTCATTTCTTCCTGCTTCTTGACTTCTACTCTATGCTTAAATCATACATCTCTTAGAATTTCCTGAATATACACTATGCTCTCTTAGCCTCTCTTGCCATTACTCCTATTCTTCCCTGCACCTTCTCATTTCCTCCCGTCTTCTGTTCACCCAACTAGTTCACTCTTATGGCACTGTGTGctaggagctacttgacagcagagagcaggcgtcatttaccctggaattcatagaagctgacttatgctaggagctcaataaatgttagttgcttgaatgaaCTACACTATGAGTAGGAACAAGGTCTTACTCATCCTTGTCACAATAACATGCAGCACAGGCCAATTACTTATGAGTCTCTTGACCACAGACCATCAGATCATGCCAATGTGTATATAGGCAGGGAAATAACCTACCTCAATTAAGTTATAAGCATTCATAAATTTTTCAGAGACCCTTCTCCTCCAGATCTGTTGTGATATTTTTCAGGAGCCAGAGGCAGTTGGAAGCTATGCAGTATCTAGGAGAGGGGTACTGGCACCATATTCTGCAGCTCCACTTTTATTCGTTAAAGAACCCTGACTGGTAACCTCTTTAAATGCCCAGAGGCCCATTTCACAGAGCTCAAGTGGAGGGAATGGCCCTATTTGAGTCTTTTGAATGATGATCCAGCCATAGAGGAAATACCCTGGTCACCCAATTCTCTATAGTTCCAGAGGGCGCTGTGTTTCTTGCTACCTTCAGAGTTACCCTAGTGCATCCTAACTCCTGGTTTATTTCAGACTTCCCTACCTTGAGCTCCTTCTGAGCTCTAAATCACTAGCAACTACTGAGTAGGTGCTCAGTAACT</dnaseq>| | sequence = <dnaseq>GCGTGTGCTGGGGTGGCGACGCCACAGCCACTAACGCGTGTGCGGTGCGGGAGGACAAGGATGTCGGGCAGGGATGTCCTGCTTGGCACCTCAGGACAGAGCCCATGGTGGCTGGCGGCCCCTGGAATGTTCGGGACGCAGAACACTTCGTGCTTGGGAACTTCTCAGAGGTGGGGACGAGGGAGAGGAAGGCGCCTGGATGCCAGGAAGTCTCCATCTTGGACAGCTGGGTGGTATTTAAGAAGGTGGTATTTATTTTTGTCGACCATATTTTGCAGAGACTGGCAAGGATGAGATGATGCCTAAGAATATCCAACTGGAGATACTTAGTTGCTTTTGAATAGGTAATTTGCATGGAGCTCAGGAAGGAAAGATGAGAGGGTTTTAACTTTGTTGGTCGTTAAAAAAAATCAAGAATGTGACCTGTTTGTCACATACGGAATTGTTGGCCACGTTTTAGGAAGCAGTGTCAGTGACTACAGCATTCTGTTTGGAGTTTTATTGAAGATTTCATTCCATAGACACTTTGGAGCACTTATGTGTCAAGTGCTTGACAAGGCCAGGGTCAGCCGCTGTGCAGCCCCTGTAGCAGTTCCCAGGGACCCGGCAAAGCACCAGAGGGGGAGGATGTTGTGTGAGTATCGCTGGTAACCCTTCTCTCTCGCCTCCCTCGTGACTCCAGGTCACTCAAACTGGGCTCCAGAGAGTAAGAACCCCGAGtccaggggctggagaaatagctgtgaaaaccctgcactcatggagttttaattgtactagaggaggggtcagacaagtagaaagtatttatctggtagtgataacactactgttaggggttagggtgtgatggggcggggaattatttcaagcagcagttttggaagttctctttgaggaggtaacacctgagcagagatttgaatacagtgagggaagaaacgatgtgactgtatgggtaaagtgccttctaaagggagggaacagaaatgctgaccagagagaagtgtgcttggtgaactccaggcttggcaaggtcagtatgactggcgagggcctactgaacaaggaagactgcgagatgctgttgcaggagtaactacaggccttgaaggaaggaaatttggatttatttctgtgcctggaaatgattagatttgaaagagtgacatggctgggcacgttttgatagacgcactggtcagcttcaaagaaggcagacagtggtggggctagaggggatacaggaagaccaatgaggaggcaatgacagcagtccaCAATTACAAGTAGCCTCCCACAATTATATAACCTTTCCACAAGGCATTTGCTTTGAGAGCCTAATGATTCTAAGATATTGAAGGGTTTTGGGTGCTATGCTCAGGAGTTTGGATATTATTGTTTTCAGGAATTTAAGAATGATaatatgtattgagcactaactacatgttgggagtttttttgtttgagacacagtttcacttttgttgcccgggctggggtgcaatggcatgacctcggcttaccgcaagctccgcctcccgggttcaagcaattctcctgcctcagcctcccctgtagctgggactacatgcatgcgccatcacgcctggataattttgtacttttagtagagatggggtttccccaggttggtcaggctgaactcctgacttcaggtgatccgcccgcatcggccccctaaagtgctgggattacaggcatgagccactgcgcctggccatgttgggcacttttacaagcactttacattatctaatgcaaccaaaaactgaggtttgccctattaataaatgagaaaactgaggcactcatctgttaagtgccttgctcaggtcccaTGTCCTTGGAACCAGGAGTCCTTCTCCTGTTGATGTTGGAAGGTTCAAAAGTGCTCTTATTACTTGTCACCCAGATGGCAAAGAACTGACATACAAAGGCCCAAGTCTTCCAGAACTGAAAACAGTAATAAAACCTTCATTTATCTGACCCATTTGTCCTGGTGATGCTGTAGTCTGTTAGGAGTACCTAACAGGTGCCCTTCCACAGCCAACTAAAAAACAAAACTATTCAAGCTGAAGAGAAGCAGTGAAACCTCTGATATGAAGCCTGACACACCCTTTGACTTTAGCCAGGACTCACACACTATATTGTTCTGAGTATTCACTGAGGAAGCCCCCGCTTCTGTCAAGGATTCTCATCAGGAACCAGTCTCCTCGGAGAAAGGAGGTTAAAACGTGGTCTGGAGAACCCCTTTCCCTTCTGCTCTATTAACTATGGATATGCAAATGAACACTTACATTTGACCAAGACCTCCATCACCAGTCTGCTTACGCTTCCCCAGGACAGTGGCTACGTGCCAGTAATTCCTGGTGTCCATTTGCTGAGCCCTGTTGGGACCCTTGAAGCGTGATATAATAAGGTCTTCCTTTAGCCTCATTTCTTCCTGCTTCTTGACTTCTACTCTATGCTTAAATCATACATCTCTTAGAATTTCCTGAATATACACTATGCTCTCTTAGCCTCTCTTGCCATTACTCCTATTCTTCCCTGCACCTTCTCATTTCCTCCCGTCTTCTGTTCACCCAACTAGTTCACTCTTATGGCACTGTGTGctaggagctacttgacagcagagagcaggcgtcatttaccctggaattcatagaagctgacttatgctaggagctcaataaatgttagttgcttgaatgaaCTACACTATGAGTAGGAACAAGGTCTTACTCATCCTTGTCACAATAACATGCAGCACAGGCCAATTACTTATGAGTCTCTTGACCACAGACCATCAGATCATGCCAATGTGTATATAGGCAGGGAAATAACCTACCTCAATTAAGTTATAAGCATTCATAAATTTTTCAGAGACCCTTCTCCTCCAGATCTGTTGTGATATTTTTCAGGAGCCAGAGGCAGTTGGAAGCTATGCAGTATCTAGGAGAGGGGTACTGGCACCATATTCTGCAGCTCCACTTTTATTCGTTAAAGAACCCTGACTGGTAACCTCTTTAAATGCCCAGAGGCCCATTTCACAGAGCTCAAGTGGAGGGAATGGCCCTATTTGAGTCTTTTGAATGATGATCCAGCCATAGAGGAAATACCCTGGTCACCCAATTCTCTATAGTTCCAGAGGGCGCTGTGTTTCTTGCTACCTTCAGAGTTACCCTAGTGCATCCTAACTCCTGGTTTATTTCAGACTTCCCTACCTTGAGCTCCTTCTGAGCTCTAAATCACTAGCAACTACTGAGTAGGTGCTCAGTAACT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG042410]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG042410]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 01:37, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105563 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3306 nt |
Genomic location |
chr5-:178364381..178367686 |
Exon number |
1 |
Exons |
178364381..178367686 |
Genome context |
|
Sequence |
000001 GCGTGTGCTG GGGTGGCGAC GCCACAGCCA CTAACGCGTG TGCGGTGCGG GAGGACAAGG ATGTCGGGCA GGGATGTCCT 000080
000081 GCTTGGCACC TCAGGACAGA GCCCATGGTG GCTGGCGGCC CCTGGAATGT TCGGGACGCA GAACACTTCG TGCTTGGGAA 000160 000161 CTTCTCAGAG GTGGGGACGA GGGAGAGGAA GGCGCCTGGA TGCCAGGAAG TCTCCATCTT GGACAGCTGG GTGGTATTTA 000240 000241 AGAAGGTGGT ATTTATTTTT GTCGACCATA TTTTGCAGAG ACTGGCAAGG ATGAGATGAT GCCTAAGAAT ATCCAACTGG 000320 000321 AGATACTTAG TTGCTTTTGA ATAGGTAATT TGCATGGAGC TCAGGAAGGA AAGATGAGAG GGTTTTAACT TTGTTGGTCG 000400 000401 TTAAAAAAAA TCAAGAATGT GACCTGTTTG TCACATACGG AATTGTTGGC CACGTTTTAG GAAGCAGTGT CAGTGACTAC 000480 000481 AGCATTCTGT TTGGAGTTTT ATTGAAGATT TCATTCCATA GACACTTTGG AGCACTTATG TGTCAAGTGC TTGACAAGGC 000560 000561 CAGGGTCAGC CGCTGTGCAG CCCCTGTAGC AGTTCCCAGG GACCCGGCAA AGCACCAGAG GGGGAGGATG TTGTGTGAGT 000640 000641 ATCGCTGGTA ACCCTTCTCT CTCGCCTCCC TCGTGACTCC AGGTCACTCA AACTGGGCTC CAGAGAGTAA GAACCCCGAG 000720 000721 tccaggggct ggagaaatag ctgtgaaaac cctgcactca tggagtttta attgtactag aggaggggtc agacaagtag 000800 000801 aaagtattta tctggtagtg ataacactac tgttaggggt tagggtgtga tggggcgggg aattatttca agcagcagtt 000880 000881 ttggaagttc tctttgagga ggtaacacct gagcagagat ttgaatacag tgagggaaga aacgatgtga ctgtatgggt 000960 000961 aaagtgcctt ctaaagggag ggaacagaaa tgctgaccag agagaagtgt gcttggtgaa ctccaggctt ggcaaggtca 001040 001041 gtatgactgg cgagggccta ctgaacaagg aagactgcga gatgctgttg caggagtaac tacaggcctt gaaggaagga 001120 001121 aatttggatt tatttctgtg cctggaaatg attagatttg aaagagtgac atggctgggc acgttttgat agacgcactg 001200 001201 gtcagcttca aagaaggcag acagtggtgg ggctagaggg gatacaggaa gaccaatgag gaggcaatga cagcagtcca 001280 001281 CAATTACAAG TAGCCTCCCA CAATTATATA ACCTTTCCAC AAGGCATTTG CTTTGAGAGC CTAATGATTC TAAGATATTG 001360 001361 AAGGGTTTTG GGTGCTATGC TCAGGAGTTT GGATATTATT GTTTTCAGGA ATTTAAGAAT GATaatatgt attgagcact 001440 001441 aactacatgt tgggagtttt tttgtttgag acacagtttc acttttgttg cccgggctgg ggtgcaatgg catgacctcg 001520 001521 gcttaccgca agctccgcct cccgggttca agcaattctc ctgcctcagc ctcccctgta gctgggacta catgcatgcg 001600 001601 ccatcacgcc tggataattt tgtactttta gtagagatgg ggtttcccca ggttggtcag gctgaactcc tgacttcagg 001680 001681 tgatccgccc gcatcggccc cctaaagtgc tgggattaca ggcatgagcc actgcgcctg gccatgttgg gcacttttac 001760 001761 aagcacttta cattatctaa tgcaaccaaa aactgaggtt tgccctatta ataaatgaga aaactgaggc actcatctgt 001840 001841 taagtgcctt gctcaggtcc caTGTCCTTG GAACCAGGAG TCCTTCTCCT GTTGATGTTG GAAGGTTCAA AAGTGCTCTT 001920 001921 ATTACTTGTC ACCCAGATGG CAAAGAACTG ACATACAAAG GCCCAAGTCT TCCAGAACTG AAAACAGTAA TAAAACCTTC 002000 002001 ATTTATCTGA CCCATTTGTC CTGGTGATGC TGTAGTCTGT TAGGAGTACC TAACAGGTGC CCTTCCACAG CCAACTAAAA 002080 002081 AACAAAACTA TTCAAGCTGA AGAGAAGCAG TGAAACCTCT GATATGAAGC CTGACACACC CTTTGACTTT AGCCAGGACT 002160 002161 CACACACTAT ATTGTTCTGA GTATTCACTG AGGAAGCCCC CGCTTCTGTC AAGGATTCTC ATCAGGAACC AGTCTCCTCG 002240 002241 GAGAAAGGAG GTTAAAACGT GGTCTGGAGA ACCCCTTTCC CTTCTGCTCT ATTAACTATG GATATGCAAA TGAACACTTA 002320 002321 CATTTGACCA AGACCTCCAT CACCAGTCTG CTTACGCTTC CCCAGGACAG TGGCTACGTG CCAGTAATTC CTGGTGTCCA 002400 002401 TTTGCTGAGC CCTGTTGGGA CCCTTGAAGC GTGATATAAT AAGGTCTTCC TTTAGCCTCA TTTCTTCCTG CTTCTTGACT 002480 002481 TCTACTCTAT GCTTAAATCA TACATCTCTT AGAATTTCCT GAATATACAC TATGCTCTCT TAGCCTCTCT TGCCATTACT 002560 002561 CCTATTCTTC CCTGCACCTT CTCATTTCCT CCCGTCTTCT GTTCACCCAA CTAGTTCACT CTTATGGCAC TGTGTGctag 002640 002641 gagctacttg acagcagaga gcaggcgtca tttaccctgg aattcataga agctgactta tgctaggagc tcaataaatg 002720 002721 ttagttgctt gaatgaaCTA CACTATGAGT AGGAACAAGG TCTTACTCAT CCTTGTCACA ATAACATGCA GCACAGGCCA 002800 002801 ATTACTTATG AGTCTCTTGA CCACAGACCA TCAGATCATG CCAATGTGTA TATAGGCAGG GAAATAACCT ACCTCAATTA 002880 002881 AGTTATAAGC ATTCATAAAT TTTTCAGAGA CCCTTCTCCT CCAGATCTGT TGTGATATTT TTCAGGAGCC AGAGGCAGTT 002960 002961 GGAAGCTATG CAGTATCTAG GAGAGGGGTA CTGGCACCAT ATTCTGCAGC TCCACTTTTA TTCGTTAAAG AACCCTGACT 003040 003041 GGTAACCTCT TTAAATGCCC AGAGGCCCAT TTCACAGAGC TCAAGTGGAG GGAATGGCCC TATTTGAGTC TTTTGAATGA 003120 003121 TGATCCAGCC ATAGAGGAAA TACCCTGGTC ACCCAATTCT CTATAGTTCC AGAGGGCGCT GTGTTTCTTG CTACCTTCAG 003200 003201 AGTTACCCTA GTGCATCCTA ACTCCTGGTT TATTTCAGAC TTCCCTACCT TGAGCTCCTT CTGAGCTCTA AATCACTAGC 003280 003281 AACTACTGAG TAGGTGCTCA GTAACT |