Difference between revisions of "NONHSAT136158"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GTGCAGTGGCACATGCCTGTAGTCCCAGCTACTCCAGAGACTGAGTTGGGAGGATGGTTGGGGCCTAGGAGGCAGAGGTTGCTGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGGGAGACCCTGTAAAAAAAAAAATACAGAGAGAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGCAAGAAAGAAAATATAAAATTATAGACCAATATGGCTCTTGAATTATTTGTTTTAGTCTTTTGCAACCAGGGTTATCTTGGCTTGTTTATGATGAAATCATTTTTCACAAAGTCTAAAGAATGTTGGTTGTCAAAATATACGGTTTCTGTGGTGCCCCATATCTGCCCCATTTCTCTGCGCCTGCGGTCTGGTTACTCCCTTATGAAAGTGCATAGAATCCCCTCTTCCCTGTTCCCCACTTTGCGAGAGATCTATTGGGAGCTAGTGGGAGTTTTTCATTTTTAACACTGGGCATTTCTATAAATTCATATTTCTGCATCTCCTTATTTTGTTAGGGAGTGATGTATGGTCCATCCTCATCATTTATGAATTCTGTAGTTGCAAATTTGCCTGCCAGACGACATTTATTTTTTTTTCTCCCCCATCAATGCTGGTGGTGCTTTTGCAGTCAGTTATGGACATGAACAGAGCGGTCAGAAATTTGAGTCTCCTGATACGAAGTTGCCCATCTGAGGTTAAACAAGGCAA</dnaseq>| | sequence = <dnaseq>GTGCAGTGGCACATGCCTGTAGTCCCAGCTACTCCAGAGACTGAGTTGGGAGGATGGTTGGGGCCTAGGAGGCAGAGGTTGCTGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGGGAGACCCTGTAAAAAAAAAAATACAGAGAGAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGCAAGAAAGAAAATATAAAATTATAGACCAATATGGCTCTTGAATTATTTGTTTTAGTCTTTTGCAACCAGGGTTATCTTGGCTTGTTTATGATGAAATCATTTTTCACAAAGTCTAAAGAATGTTGGTTGTCAAAATATACGGTTTCTGTGGTGCCCCATATCTGCCCCATTTCTCTGCGCCTGCGGTCTGGTTACTCCCTTATGAAAGTGCATAGAATCCCCTCTTCCCTGTTCCCCACTTTGCGAGAGATCTATTGGGAGCTAGTGGGAGTTTTTCATTTTTAACACTGGGCATTTCTATAAATTCATATTTCTGCATCTCCTTATTTTGTTAGGGAGTGATGTATGGTCCATCCTCATCATTTATGAATTCTGTAGTTGCAAATTTGCCTGCCAGACGACATTTATTTTTTTTTCTCCCCCATCAATGCTGGTGGTGCTTTTGCAGTCAGTTATGGACATGAACAGAGCGGTCAGAAATTTGAGTCTCCTGATACGAAGTTGCCCATCTGAGGTTAAACAAGGCAA</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:Transcripts]] |
Latest revision as of 02:39, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
860 nt |
Genomic location |
chrX-:5581462..5654346 |
Exon number |
3 |
Exons |
5581462..5581744,5597447..5597647,5653971..5654346 |
Genome context |
|
Sequence |
000001 GTGCAGTGGC ACATGCCTGT AGTCCCAGCT ACTCCAGAGA CTGAGTTGGG AGGATGGTTG GGGCCTAGGA GGCAGAGGTT 000080
000081 GCTGTGAGCC AAGATTGCAC CACTGCACTC CAGCCTGGGT GACAGAGGGA GACCCTGTAA AAAAAAAAAT ACAGAGAGAG 000160 000161 AGAGAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAGGAAAG 000240 000241 AAAGAAAGAA AGAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAG AAAGAAAGAA AGAAAGAAAG 000320 000321 AAAGAAGAAA GCAAGAAAGA AAATATAAAA TTATAGACCA ATATGGCTCT TGAATTATTT GTTTTAGTCT TTTGCAACCA 000400 000401 GGGTTATCTT GGCTTGTTTA TGATGAAATC ATTTTTCACA AAGTCTAAAG AATGTTGGTT GTCAAAATAT ACGGTTTCTG 000480 000481 TGGTGCCCCA TATCTGCCCC ATTTCTCTGC GCCTGCGGTC TGGTTACTCC CTTATGAAAG TGCATAGAAT CCCCTCTTCC 000560 000561 CTGTTCCCCA CTTTGCGAGA GATCTATTGG GAGCTAGTGG GAGTTTTTCA TTTTTAACAC TGGGCATTTC TATAAATTCA 000640 000641 TATTTCTGCA TCTCCTTATT TTGTTAGGGA GTGATGTATG GTCCATCCTC ATCATTTATG AATTCTGTAG TTGCAAATTT 000720 000721 GCCTGCCAGA CGACATTTAT TTTTTTTTCT CCCCCATCAA TGCTGGTGGT GCTTTTGCAG TCAGTTATGG ACATGAACAG 000800 000801 AGCGGTCAGA AATTTGAGTC TCCTGATACG AAGTTGCCCA TCTGAGGTTA AACAAGGCAA |
Predicted Small Protein
Name | NONHSAT136158_smProtein_362:616 |
Length | 85 |
Molecular weight | 9868.7619 |
Aromaticity | 0.166666666667 |
Instability index | 42.8607142857 |
Isoelectric point | 9.40887451172 |
Runs | 15 |
Runs residual | 0.0445859872611 |
Runs probability | 0.0456750868515 |
Amino acid sequence | MALELFVLVFCNQGYLGLFMMKSFFTKSKECWLSKYTVSVVPHICPISLRLRSGYSLMKV HRIPSSLFPTLREIYWELVGVFHF |
Secondary structure | LLEEEEEEEEELLLHHHHHHHHHHLLLLLEEEEEEEEEEEELLEEELEEEELLLLEEEEE EELLLLLLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |