Difference between revisions of "NONHSAT140895"
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sequence = <dnaseq>GCAGCTGAAAGAATGTCTATTCTACATCATGATCGAGAAGTTCGCAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGAGTGGCTCTTTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAATACATGAAGTAAGTTTTTTGTATCATGTCATGTTAGTTATCAAACCAATTAATTTTAGTCATCTGTTGGTCTATTTGCATATTTAAATTTAGAAATAAAGAGTTAATTTTTCTGCAGTTGAGCTGATAGAAATCCCCTTTATATAAAGAAATTTATTAAAATCAGGTGCTAAAATCTCATTTCATCTTAGATGAATTTATTTACTAAATTTGACAACATTCAACTCATATAACTGATAGCTGGTTAATCTTAAAAACAGTTAATCTTTATATTCAGTGCCTAAATATATTCCTTTTCTGATGTCCTAAAGGTTTCTTGGGAATAAAGACTTAATGGGAAAAATATCTTAATAACTTTTTTAAAAAATTCTTCTTTCTTGAATGCAGTCTTTAATATGCTTAGTACAGGTCTTCCAGTAGTACACCAGCTTCTAAATGATGATTTGTTTCTGTCATCCTGTATTACATTTGTAAGCATGTTTTCTTCCCTTCTCTAAATACATTATGTCCTTATTTTTATATTGTGTTAGAGCTGCTGAAATGGGAATGCCAAATAAGAAATTTCTGGTTAAACAAAATCCTTCTGAAACAAGGTGAGAAAAATCACTTAGTCTTAATGAGAGGCTTTTTGTTTTTTATAGAAAAAAAAAATTggctgggcacggtggctcacgcctgtaatcc</dnaseq>| | sequence = <dnaseq>GCAGCTGAAAGAATGTCTATTCTACATCATGATCGAGAAGTTCGCAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGAGTGGCTCTTTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAATACATGAAGTAAGTTTTTTGTATCATGTCATGTTAGTTATCAAACCAATTAATTTTAGTCATCTGTTGGTCTATTTGCATATTTAAATTTAGAAATAAAGAGTTAATTTTTCTGCAGTTGAGCTGATAGAAATCCCCTTTATATAAAGAAATTTATTAAAATCAGGTGCTAAAATCTCATTTCATCTTAGATGAATTTATTTACTAAATTTGACAACATTCAACTCATATAACTGATAGCTGGTTAATCTTAAAAACAGTTAATCTTTATATTCAGTGCCTAAATATATTCCTTTTCTGATGTCCTAAAGGTTTCTTGGGAATAAAGACTTAATGGGAAAAATATCTTAATAACTTTTTTAAAAAATTCTTCTTTCTTGAATGCAGTCTTTAATATGCTTAGTACAGGTCTTCCAGTAGTACACCAGCTTCTAAATGATGATTTGTTTCTGTCATCCTGTATTACATTTGTAAGCATGTTTTCTTCCCTTCTCTAAATACATTATGTCCTTATTTTTATATTGTGTTAGAGCTGCTGAAATGGGAATGCCAAATAAGAAATTTCTGGTTAAACAAAATCCTTCTGAAACAAGGTGAGAAAAATCACTTAGTCTTAATGAGAGGCTTTTTGTTTTTTATAGAAAAAAAAAATTggctgggcacggtggctcacgcctgtaatcc</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG018791]] | + | [[Category:Sense]][[Category:NONHSAG018791]][[Category:Transcripts]] |
Latest revision as of 03:00, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140895 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
818 nt |
Genomic location |
chr16+:19556464..19557887 |
Exon number |
2 |
Exons |
19556464..19556532,19557139..19557887 |
Genome context |
|
Sequence |
000001 GCAGCTGAAA GAATGTCTAT TCTACATCAT GATCGAGAAG TTCGCAAAGA GAAAATGCTC AGGCAAATGG ATAAAATGAA 000080
000081 AAGTCCACGA GTGGCTCTTT CAGCTGCAAC ACAGAAGTCT CTTGATAGGA AGAAATACAT GAAGTAAGTT TTTTGTATCA 000160 000161 TGTCATGTTA GTTATCAAAC CAATTAATTT TAGTCATCTG TTGGTCTATT TGCATATTTA AATTTAGAAA TAAAGAGTTA 000240 000241 ATTTTTCTGC AGTTGAGCTG ATAGAAATCC CCTTTATATA AAGAAATTTA TTAAAATCAG GTGCTAAAAT CTCATTTCAT 000320 000321 CTTAGATGAA TTTATTTACT AAATTTGACA ACATTCAACT CATATAACTG ATAGCTGGTT AATCTTAAAA ACAGTTAATC 000400 000401 TTTATATTCA GTGCCTAAAT ATATTCCTTT TCTGATGTCC TAAAGGTTTC TTGGGAATAA AGACTTAATG GGAAAAATAT 000480 000481 CTTAATAACT TTTTTAAAAA ATTCTTCTTT CTTGAATGCA GTCTTTAATA TGCTTAGTAC AGGTCTTCCA GTAGTACACC 000560 000561 AGCTTCTAAA TGATGATTTG TTTCTGTCAT CCTGTATTAC ATTTGTAAGC ATGTTTTCTT CCCTTCTCTA AATACATTAT 000640 000641 GTCCTTATTT TTATATTGTG TTAGAGCTGC TGAAATGGGA ATGCCAAATA AGAAATTTCT GGTTAAACAA AATCCTTCTG 000720 000721 AAACAAGGTG AGAAAAATCA CTTAGTCTTA ATGAGAGGCT TTTTGTTTTT TATAGAAAAA AAAAATTggc tgggcacggt 000800 000801 ggctcacgcc tgtaatcc |
Predicted Small Protein
Name | NONHSAT140895_smProtein_638:730 |
Length | 31 |
Molecular weight | 3490.1485 |
Aromaticity | 0.1 |
Instability index | 63.14 |
Isoelectric point | 9.62469482422 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0401725254667 |
Amino acid sequence | MSLFLYCVRAAEMGMPNKKFLVKQNPSETR |
Secondary structure | LLHHHHHHHHHHLLLLLHHHEELLLLLLLL |
PRMN | - |
PiMo | - |