Difference between revisions of "Lnc-C9orf170-1:3"
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sequence = <dnaseq>GCGTCTGCGGCCTGTCAAAAACTGGCGCTTTTTTCCTCCCCTTTCCGTGGAGAGACTATCAACTCCATCTGTCACAAAAATTAAGGCTAAATCTCCTCTCCAGAAGCAGAGGGAGCCGGGGCTCCGACGCGCTCAGCGTCGGGCTGTCTGCCTCTCCCTAGAGGCCAAGTGAATTTGAAATGGCAAAAGTCACAGCCGGAGGCCCAGCACTAGGAGATTCCTCCGGCTGCGGGAAATCTTCCTGTACCTGCTGAAGCTGCTGCGTTCCTCAGAGGCGCTTGGTCTGCCGTGGGAAGCTGCACCTCTGCAGTCCCCAAAACCAAAATCAAACCTTAAAAGAGCCAGACTGAGAAGCCAGTCACCACGTAAGACATCTGGACCACCTTCAGACTCGCATGCTGTGAGGAAGCCCATGCTTACTATGTGTAGAGGATACATGGAGAAGGAAAGAGATGCCTGGCCAGCTCCCTGCTGTTTCAGCCATGTGAGTGAAGAAGGCACCAGACTTGTGAGTGGAGACACTAACTTGGATGTCCAGCCCAGCTGAACCTTCAGGCAGAGGTGCTGAGCAGCTAATTGGAGGGGATAGTATGAGCCTCCAAAGATTAGGGAAGAAAATTGCAGTTGAAGAAAACTTGCTTTGGTTCAATGCAAAAATAATGGGATGAATGGCATGCTGAAATATCATATGACTTACGAAAATGATGAATGGTTTATTGAATCTACATATGTGGAACCCATGAATGGGAGTCGGAGAAGGGGGCAACTGTATACGCAAAAAGCTATCATAATTGCCAAAATAGTGATAACAATGTTGAAACACTACTGGGATTACTACTGTTAATGACTACCAGTGATCAAGCACCTCCCCTGCCCCAGTGTTTGCCTGCCTTGTTTGAAGACACGAAAAAATGTACACAAAATGATTTAGAACTGTTGAACTTTTCAGAAAATAATTTAAAATCATCTACCTCATAACTAAAGGAAATCAAAGCAAATGGCCTTAAGAGTGGCATCCAGTGGACCGTCCTCTGAAAAGTGACCCACAATTCTGCATGAATCTTTCCAGGACACTGAATTGGAGCCAGCTGATGTAAGGAGCTTACCTTGGTTGCCACCTTCTGGTCTCTGTTTGAGGAACAACTGCATGTGATTAAGGGTAACAGATACAGAATTTGTGTTAAGCCCAGGATGTAATTTGTTGAATGAGTAGCAATTGACTTGAAAATTGGATGGATGGGGATTGTGTTTCTTTACTCTCTCTCTCTTTTCTTTCTCCCTCTCAATACGGCTAGATTAAATCATCTTTAGTCTAGTCAAATCAGTGCTTGCTGTTGTTAAGAAGGATATTCTTGAGGTATAGTACTTCAGGGATGCTAATTGGGATTTGAGCAAGATGAAATTTCTACCCAGGTGTGTGCATCGTATACTGGAGATGGCAAAAACTGGTTCCAAATGAGGGTGTGTTTGTGTTCCTAGGCATGTTCCTATAGGGGCCAAAAAGATGCAAAATCTTCTTTTCTAAAGCTTTTGGTGTTCTCAAGCTTGTCTACACAATGGAATCACCTGGAGAATTTGGAAAACCAAAAATACTGATACCACTGATCCTACCCAACAGATTCTATTTTAATTGGTATGGAGTATGGCCTCAGCACTGATATTTTTTAAAGTTTCTGAGGCGATCCTAATGTGCAGCAAAGCACCGTCAAGCCCCCTCTCTCTGAGGAGGCACCAGCTGCAAGCATGTTTTACACCAATATGTTTGCTGAATATAAACATCCCAGTGCAAACTCTTGCACCCCAGAACTCTGGGCTGCTTGTGGACAGTCTTTGGCAAAGTCTGAATTTATAAACTGATA</dnaseq>| | sequence = <dnaseq>GCGTCTGCGGCCTGTCAAAAACTGGCGCTTTTTTCCTCCCCTTTCCGTGGAGAGACTATCAACTCCATCTGTCACAAAAATTAAGGCTAAATCTCCTCTCCAGAAGCAGAGGGAGCCGGGGCTCCGACGCGCTCAGCGTCGGGCTGTCTGCCTCTCCCTAGAGGCCAAGTGAATTTGAAATGGCAAAAGTCACAGCCGGAGGCCCAGCACTAGGAGATTCCTCCGGCTGCGGGAAATCTTCCTGTACCTGCTGAAGCTGCTGCGTTCCTCAGAGGCGCTTGGTCTGCCGTGGGAAGCTGCACCTCTGCAGTCCCCAAAACCAAAATCAAACCTTAAAAGAGCCAGACTGAGAAGCCAGTCACCACGTAAGACATCTGGACCACCTTCAGACTCGCATGCTGTGAGGAAGCCCATGCTTACTATGTGTAGAGGATACATGGAGAAGGAAAGAGATGCCTGGCCAGCTCCCTGCTGTTTCAGCCATGTGAGTGAAGAAGGCACCAGACTTGTGAGTGGAGACACTAACTTGGATGTCCAGCCCAGCTGAACCTTCAGGCAGAGGTGCTGAGCAGCTAATTGGAGGGGATAGTATGAGCCTCCAAAGATTAGGGAAGAAAATTGCAGTTGAAGAAAACTTGCTTTGGTTCAATGCAAAAATAATGGGATGAATGGCATGCTGAAATATCATATGACTTACGAAAATGATGAATGGTTTATTGAATCTACATATGTGGAACCCATGAATGGGAGTCGGAGAAGGGGGCAACTGTATACGCAAAAAGCTATCATAATTGCCAAAATAGTGATAACAATGTTGAAACACTACTGGGATTACTACTGTTAATGACTACCAGTGATCAAGCACCTCCCCTGCCCCAGTGTTTGCCTGCCTTGTTTGAAGACACGAAAAAATGTACACAAAATGATTTAGAACTGTTGAACTTTTCAGAAAATAATTTAAAATCATCTACCTCATAACTAAAGGAAATCAAAGCAAATGGCCTTAAGAGTGGCATCCAGTGGACCGTCCTCTGAAAAGTGACCCACAATTCTGCATGAATCTTTCCAGGACACTGAATTGGAGCCAGCTGATGTAAGGAGCTTACCTTGGTTGCCACCTTCTGGTCTCTGTTTGAGGAACAACTGCATGTGATTAAGGGTAACAGATACAGAATTTGTGTTAAGCCCAGGATGTAATTTGTTGAATGAGTAGCAATTGACTTGAAAATTGGATGGATGGGGATTGTGTTTCTTTACTCTCTCTCTCTTTTCTTTCTCCCTCTCAATACGGCTAGATTAAATCATCTTTAGTCTAGTCAAATCAGTGCTTGCTGTTGTTAAGAAGGATATTCTTGAGGTATAGTACTTCAGGGATGCTAATTGGGATTTGAGCAAGATGAAATTTCTACCCAGGTGTGTGCATCGTATACTGGAGATGGCAAAAACTGGTTCCAAATGAGGGTGTGTTTGTGTTCCTAGGCATGTTCCTATAGGGGCCAAAAAGATGCAAAATCTTCTTTTCTAAAGCTTTTGGTGTTCTCAAGCTTGTCTACACAATGGAATCACCTGGAGAATTTGGAAAACCAAAAATACTGATACCACTGATCCTACCCAACAGATTCTATTTTAATTGGTATGGAGTATGGCCTCAGCACTGATATTTTTTAAAGTTTCTGAGGCGATCCTAATGTGCAGCAAAGCACCGTCAAGCCCCCTCTCTCTGAGGAGGCACCAGCTGCAAGCATGTTTTACACCAATATGTTTGCTGAATATAAACATCCCAGTGCAAACTCTTGCACCCCAGAACTCTGGGCTGCTTGTGGACAGTCTTTGGCAAAGTCTGAATTTATAAACTGATA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-C9orf170-1]][[Category:NONHSAG052726]] | + | [[Category:Intergenic]][[Category:lnc-C9orf170-1]][[Category:NONHSAG052726]][[Category:Transcripts]] |
Latest revision as of 03:50, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-C9orf170-1:3 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT132843 |
| Classification |
intergenic |
| Length |
1859 nt |
| Genomic location |
chr9+:89563558..89613018 |
| Exon number |
6 |
| Exons |
89563558..89563908,89565782..89565985,89596685..89596840,89602363..89602530,89603717..89603821,89612144..89613018 |
| Genome context |
|
| Sequence |
000001 GCGTCTGCGG CCTGTCAAAA ACTGGCGCTT TTTTCCTCCC CTTTCCGTGG AGAGACTATC AACTCCATCT GTCACAAAAA 000080
000081 TTAAGGCTAA ATCTCCTCTC CAGAAGCAGA GGGAGCCGGG GCTCCGACGC GCTCAGCGTC GGGCTGTCTG CCTCTCCCTA 000160 000161 GAGGCCAAGT GAATTTGAAA TGGCAAAAGT CACAGCCGGA GGCCCAGCAC TAGGAGATTC CTCCGGCTGC GGGAAATCTT 000240 000241 CCTGTACCTG CTGAAGCTGC TGCGTTCCTC AGAGGCGCTT GGTCTGCCGT GGGAAGCTGC ACCTCTGCAG TCCCCAAAAC 000320 000321 CAAAATCAAA CCTTAAAAGA GCCAGACTGA GAAGCCAGTC ACCACGTAAG ACATCTGGAC CACCTTCAGA CTCGCATGCT 000400 000401 GTGAGGAAGC CCATGCTTAC TATGTGTAGA GGATACATGG AGAAGGAAAG AGATGCCTGG CCAGCTCCCT GCTGTTTCAG 000480 000481 CCATGTGAGT GAAGAAGGCA CCAGACTTGT GAGTGGAGAC ACTAACTTGG ATGTCCAGCC CAGCTGAACC TTCAGGCAGA 000560 000561 GGTGCTGAGC AGCTAATTGG AGGGGATAGT ATGAGCCTCC AAAGATTAGG GAAGAAAATT GCAGTTGAAG AAAACTTGCT 000640 000641 TTGGTTCAAT GCAAAAATAA TGGGATGAAT GGCATGCTGA AATATCATAT GACTTACGAA AATGATGAAT GGTTTATTGA 000720 000721 ATCTACATAT GTGGAACCCA TGAATGGGAG TCGGAGAAGG GGGCAACTGT ATACGCAAAA AGCTATCATA ATTGCCAAAA 000800 000801 TAGTGATAAC AATGTTGAAA CACTACTGGG ATTACTACTG TTAATGACTA CCAGTGATCA AGCACCTCCC CTGCCCCAGT 000880 000881 GTTTGCCTGC CTTGTTTGAA GACACGAAAA AATGTACACA AAATGATTTA GAACTGTTGA ACTTTTCAGA AAATAATTTA 000960 000961 AAATCATCTA CCTCATAACT AAAGGAAATC AAAGCAAATG GCCTTAAGAG TGGCATCCAG TGGACCGTCC TCTGAAAAGT 001040 001041 GACCCACAAT TCTGCATGAA TCTTTCCAGG ACACTGAATT GGAGCCAGCT GATGTAAGGA GCTTACCTTG GTTGCCACCT 001120 001121 TCTGGTCTCT GTTTGAGGAA CAACTGCATG TGATTAAGGG TAACAGATAC AGAATTTGTG TTAAGCCCAG GATGTAATTT 001200 001201 GTTGAATGAG TAGCAATTGA CTTGAAAATT GGATGGATGG GGATTGTGTT TCTTTACTCT CTCTCTCTTT TCTTTCTCCC 001280 001281 TCTCAATACG GCTAGATTAA ATCATCTTTA GTCTAGTCAA ATCAGTGCTT GCTGTTGTTA AGAAGGATAT TCTTGAGGTA 001360 001361 TAGTACTTCA GGGATGCTAA TTGGGATTTG AGCAAGATGA AATTTCTACC CAGGTGTGTG CATCGTATAC TGGAGATGGC 001440 001441 AAAAACTGGT TCCAAATGAG GGTGTGTTTG TGTTCCTAGG CATGTTCCTA TAGGGGCCAA AAAGATGCAA AATCTTCTTT 001520 001521 TCTAAAGCTT TTGGTGTTCT CAAGCTTGTC TACACAATGG AATCACCTGG AGAATTTGGA AAACCAAAAA TACTGATACC 001600 001601 ACTGATCCTA CCCAACAGAT TCTATTTTAA TTGGTATGGA GTATGGCCTC AGCACTGATA TTTTTTAAAG TTTCTGAGGC 001680 001681 GATCCTAATG TGCAGCAAAG CACCGTCAAG CCCCCTCTCT CTGAGGAGGC ACCAGCTGCA AGCATGTTTT ACACCAATAT 001760 001761 GTTTGCTGAA TATAAACATC CCAGTGCAAA CTCTTGCACC CCAGAACTCT GGGCTGCTTG TGGACAGTCT TTGGCAAAGT 001840 001841 CTGAATTTAT AAACTGATA |
