Difference between revisions of "Lnc-MFNG-1:1"

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sequence = <dnaseq>TGCCAAGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGATGTGCGCCACCGCGCCCAGCCCTGGCAATCTTTTAATTGATGCACCTGCTCCTGCTGTGAGTGAGGTGGACTCCACCCCGGGAGGCTGGTGACCTATCATCTCAGCTTTGCCCTTCTATTGGGAAACTGAGGCACAGAAGGGGAGAAGGTCCTTGTGCCAGGTCATAGGTCTTCTCGGTGCCAGAGCCAAGGTTGGAGGCAGCCTGGCTCTGCAGTGGTCATCTCGCTGCGGGACAACTGAAGAGTTGGAGAACCTCCTCAGGCCTGGGCTCCACCCTGCTGCCCACCTGTGGCTCTATGCCCTTAGGCAGGTGGCTTCACTGTTCACTGGCCTCTCATCTGTAAAATGGGCACAGTGGCTCCTATGCAGCAGGCTGCGAGGCTTTGAGATGCTGCATAGAAAGCTCCTGATGCGGGGTAGTTGCTCAGTAAGTAGCACCTCTCTGTCCTTGCTGAGCTCACGTTATCAGCAGTAAGAGGTTGGGGTACTGGGCTGGCCATAACCTCCACTCCCCACCTTGGCTGTTATCACAGCAGCCTCCTCGCTGCTCCTGTAGTCCTCTCTCCACTGCTCACTGGCTCCTGGCACAATGGCCTCCTTGCTTGCTGTGGCAGGTGTCATGTTCTCTGCCAGCACCAGTTCTTGCCTCTCCTTGTATTGCAACCCTCACTCCTGCACAGCTGGCTTGTTCTTGTCAAGCTCCCATGTCCCACCTCTTAGGGAGGCTCCCCACTCCCATCACACAGCAGCCACCTGGTGGTCATCAATCACCTCCTGTTATAGTCACTCATAACCTGTCACCCTTGCAGACCTGCCTTCCAGGTATTTGTTTGTTGTCTACTCCCACCTGGCTGTGAGCTCCACGGTCAGGGATCCCCTTGGTTCTGTTCCCTGCAGCTCATGACCTGGCATAGTAGATCCTCAACAAATATCTGAGGAACGAACAGAAACATAAGTGAACGGACTTCTCAGATCTCTTCCAGCTCTGTCAGTGTTTTAAGATGCTATGGAAGATACTGAAATAACTGAGGCAATGCAGTGGGGCTTCCTAATGGAGGGATCAGGCTGGCAATACCAGAACGCACCAAGCCTTCTTAGTATCACCCAGAAAGCGTTCTTAGTATGCTCCAGATGTGATCCCATAGGAAGGACACAGCACTTCCCAGGAAGTCCGCTTGCTAGAATGATTGACCCTACATCACCTCAACCCTCTGGACCTAAACACCAGTCTACAGGAAGCAGGAGGACAGTGCAACATGTTAAATGACACCACGAGGGTTCGGTCTGCCACATCAACAATGAGGACAGTCTCACATGACGAAGGGCCTGGTTTCCTCAACAAGTAAAAGGGCATAAAAAGGAAGAGAGTAAAGACTGTTAGAGAGGAAAATAGATTTAAGGGATAAAGTACCAAAATGCAATGTATGGGTCGGGTGCCATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGGCCAACATGGAGAAACCCTGTCTCTACTGAAAATACAGAAATTAGCCAGGCGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCCTGAGGCGAAGGTTGCAGTGAGCCGAGATCGCGCTGCTGCATTCCAGCCTGGGCAACGAGACTTTGTTTAGATCTTTATTCAAGCAGACGAACCCTAAAAAGGCATTTTTCAGGAAAATGAGAAAATTTGAAGATGGACTGCATATTAGAGGATCTTAAGGAATGGTTCATTTTATTAGGTATGGTGATGATGTTGGGCTTATTTTTAGAAATGTGCTAGTGTGTGAGAGATACATTCTGAAATATTAATGGGTGAAATGATCTGATGTCTGACATTTTTGTTAAAAAGGGGCTTGAGGGAGGAATGGAATGAGAATGGCAAAGTGGGTATGGCAGTTAGAGCTGGGTGATGGGTGCGTGGGAGTGCCTCATACCAGTCCCTCTACTTCTGTAGGGGTTTGAGACTTTCCATAATAAAAGTAAAATGGAATAAATAAA</dnaseq>|
 
sequence = <dnaseq>TGCCAAGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGATGTGCGCCACCGCGCCCAGCCCTGGCAATCTTTTAATTGATGCACCTGCTCCTGCTGTGAGTGAGGTGGACTCCACCCCGGGAGGCTGGTGACCTATCATCTCAGCTTTGCCCTTCTATTGGGAAACTGAGGCACAGAAGGGGAGAAGGTCCTTGTGCCAGGTCATAGGTCTTCTCGGTGCCAGAGCCAAGGTTGGAGGCAGCCTGGCTCTGCAGTGGTCATCTCGCTGCGGGACAACTGAAGAGTTGGAGAACCTCCTCAGGCCTGGGCTCCACCCTGCTGCCCACCTGTGGCTCTATGCCCTTAGGCAGGTGGCTTCACTGTTCACTGGCCTCTCATCTGTAAAATGGGCACAGTGGCTCCTATGCAGCAGGCTGCGAGGCTTTGAGATGCTGCATAGAAAGCTCCTGATGCGGGGTAGTTGCTCAGTAAGTAGCACCTCTCTGTCCTTGCTGAGCTCACGTTATCAGCAGTAAGAGGTTGGGGTACTGGGCTGGCCATAACCTCCACTCCCCACCTTGGCTGTTATCACAGCAGCCTCCTCGCTGCTCCTGTAGTCCTCTCTCCACTGCTCACTGGCTCCTGGCACAATGGCCTCCTTGCTTGCTGTGGCAGGTGTCATGTTCTCTGCCAGCACCAGTTCTTGCCTCTCCTTGTATTGCAACCCTCACTCCTGCACAGCTGGCTTGTTCTTGTCAAGCTCCCATGTCCCACCTCTTAGGGAGGCTCCCCACTCCCATCACACAGCAGCCACCTGGTGGTCATCAATCACCTCCTGTTATAGTCACTCATAACCTGTCACCCTTGCAGACCTGCCTTCCAGGTATTTGTTTGTTGTCTACTCCCACCTGGCTGTGAGCTCCACGGTCAGGGATCCCCTTGGTTCTGTTCCCTGCAGCTCATGACCTGGCATAGTAGATCCTCAACAAATATCTGAGGAACGAACAGAAACATAAGTGAACGGACTTCTCAGATCTCTTCCAGCTCTGTCAGTGTTTTAAGATGCTATGGAAGATACTGAAATAACTGAGGCAATGCAGTGGGGCTTCCTAATGGAGGGATCAGGCTGGCAATACCAGAACGCACCAAGCCTTCTTAGTATCACCCAGAAAGCGTTCTTAGTATGCTCCAGATGTGATCCCATAGGAAGGACACAGCACTTCCCAGGAAGTCCGCTTGCTAGAATGATTGACCCTACATCACCTCAACCCTCTGGACCTAAACACCAGTCTACAGGAAGCAGGAGGACAGTGCAACATGTTAAATGACACCACGAGGGTTCGGTCTGCCACATCAACAATGAGGACAGTCTCACATGACGAAGGGCCTGGTTTCCTCAACAAGTAAAAGGGCATAAAAAGGAAGAGAGTAAAGACTGTTAGAGAGGAAAATAGATTTAAGGGATAAAGTACCAAAATGCAATGTATGGGTCGGGTGCCATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGGCCAACATGGAGAAACCCTGTCTCTACTGAAAATACAGAAATTAGCCAGGCGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATTGCTTGAACCCTGAGGCGAAGGTTGCAGTGAGCCGAGATCGCGCTGCTGCATTCCAGCCTGGGCAACGAGACTTTGTTTAGATCTTTATTCAAGCAGACGAACCCTAAAAAGGCATTTTTCAGGAAAATGAGAAAATTTGAAGATGGACTGCATATTAGAGGATCTTAAGGAATGGTTCATTTTATTAGGTATGGTGATGATGTTGGGCTTATTTTTAGAAATGTGCTAGTGTGTGAGAGATACATTCTGAAATATTAATGGGTGAAATGATCTGATGTCTGACATTTTTGTTAAAAAGGGGCTTGAGGGAGGAATGGAATGAGAATGGCAAAGTGGGTATGGCAGTTAGAGCTGGGTGATGGGTGCGTGGGAGTGCCTCATACCAGTCCCTCTACTTCTGTAGGGGTTTGAGACTTTCCATAATAAAAGTAAAATGGAATAAATAAA</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-MFNG-1]][[Category:NONHSAG033872]]
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[[Category:Intergenic]][[Category:lnc-MFNG-1]][[Category:NONHSAG033872]][[Category:Transcripts]]

Latest revision as of 04:40, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-MFNG-1:1

Source

LNCipedia2.1

Same with

NONHSAT086599

Classification

intergenic

Length

2155 nt

Genomic location

chr22-:37860583..37862888

Exon number

2

Exons

37860583..37862537,37862689..37862888

Genome context

Sequence
000001 TGCCAAGTTG GCCAGGCTGG TTTCAAACTC CTGACCTCAA GTGATCCGCC CGCCTCGGCC TCCCAAAGTG CTGGGATTAT 000080
000081 AGATGTGCGC CACCGCGCCC AGCCCTGGCA ATCTTTTAAT TGATGCACCT GCTCCTGCTG TGAGTGAGGT GGACTCCACC 000160
000161 CCGGGAGGCT GGTGACCTAT CATCTCAGCT TTGCCCTTCT ATTGGGAAAC TGAGGCACAG AAGGGGAGAA GGTCCTTGTG 000240
000241 CCAGGTCATA GGTCTTCTCG GTGCCAGAGC CAAGGTTGGA GGCAGCCTGG CTCTGCAGTG GTCATCTCGC TGCGGGACAA 000320
000321 CTGAAGAGTT GGAGAACCTC CTCAGGCCTG GGCTCCACCC TGCTGCCCAC CTGTGGCTCT ATGCCCTTAG GCAGGTGGCT 000400
000401 TCACTGTTCA CTGGCCTCTC ATCTGTAAAA TGGGCACAGT GGCTCCTATG CAGCAGGCTG CGAGGCTTTG AGATGCTGCA 000480
000481 TAGAAAGCTC CTGATGCGGG GTAGTTGCTC AGTAAGTAGC ACCTCTCTGT CCTTGCTGAG CTCACGTTAT CAGCAGTAAG 000560
000561 AGGTTGGGGT ACTGGGCTGG CCATAACCTC CACTCCCCAC CTTGGCTGTT ATCACAGCAG CCTCCTCGCT GCTCCTGTAG 000640
000641 TCCTCTCTCC ACTGCTCACT GGCTCCTGGC ACAATGGCCT CCTTGCTTGC TGTGGCAGGT GTCATGTTCT CTGCCAGCAC 000720
000721 CAGTTCTTGC CTCTCCTTGT ATTGCAACCC TCACTCCTGC ACAGCTGGCT TGTTCTTGTC AAGCTCCCAT GTCCCACCTC 000800
000801 TTAGGGAGGC TCCCCACTCC CATCACACAG CAGCCACCTG GTGGTCATCA ATCACCTCCT GTTATAGTCA CTCATAACCT 000880
000881 GTCACCCTTG CAGACCTGCC TTCCAGGTAT TTGTTTGTTG TCTACTCCCA CCTGGCTGTG AGCTCCACGG TCAGGGATCC 000960
000961 CCTTGGTTCT GTTCCCTGCA GCTCATGACC TGGCATAGTA GATCCTCAAC AAATATCTGA GGAACGAACA GAAACATAAG 001040
001041 TGAACGGACT TCTCAGATCT CTTCCAGCTC TGTCAGTGTT TTAAGATGCT ATGGAAGATA CTGAAATAAC TGAGGCAATG 001120
001121 CAGTGGGGCT TCCTAATGGA GGGATCAGGC TGGCAATACC AGAACGCACC AAGCCTTCTT AGTATCACCC AGAAAGCGTT 001200
001201 CTTAGTATGC TCCAGATGTG ATCCCATAGG AAGGACACAG CACTTCCCAG GAAGTCCGCT TGCTAGAATG ATTGACCCTA 001280
001281 CATCACCTCA ACCCTCTGGA CCTAAACACC AGTCTACAGG AAGCAGGAGG ACAGTGCAAC ATGTTAAATG ACACCACGAG 001360
001361 GGTTCGGTCT GCCACATCAA CAATGAGGAC AGTCTCACAT GACGAAGGGC CTGGTTTCCT CAACAAGTAA AAGGGCATAA 001440
001441 AAAGGAAGAG AGTAAAGACT GTTAGAGAGG AAAATAGATT TAAGGGATAA AGTACCAAAA TGCAATGTAT GGGTCGGGTG 001520
001521 CCATGGCTCA CGCCTGTAAT CCCAGCACTT TGGGAGGCCA AGGTGGGCGG ATCACCTGAG GTCAGGAGTT CCAGACCAGC 001600
001601 CTGGCCAACA TGGAGAAACC CTGTCTCTAC TGAAAATACA GAAATTAGCC AGGCGTGGTG GCGGGCACCT GTAATCCCAG 001680
001681 CTACTTGGGA GGCTGAGGCG GGAGAATTGC TTGAACCCTG AGGCGAAGGT TGCAGTGAGC CGAGATCGCG CTGCTGCATT 001760
001761 CCAGCCTGGG CAACGAGACT TTGTTTAGAT CTTTATTCAA GCAGACGAAC CCTAAAAAGG CATTTTTCAG GAAAATGAGA 001840
001841 AAATTTGAAG ATGGACTGCA TATTAGAGGA TCTTAAGGAA TGGTTCATTT TATTAGGTAT GGTGATGATG TTGGGCTTAT 001920
001921 TTTTAGAAAT GTGCTAGTGT GTGAGAGATA CATTCTGAAA TATTAATGGG TGAAATGATC TGATGTCTGA CATTTTTGTT 002000
002001 AAAAAGGGGC TTGAGGGAGG AATGGAATGA GAATGGCAAA GTGGGTATGG CAGTTAGAGC TGGGTGATGG GTGCGTGGGA 002080
002081 GTGCCTCATA CCAGTCCCTC TACTTCTGTA GGGGTTTGAG ACTTTCCATA ATAAAAGTAA AATGGAATAA ATAAA
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