Difference between revisions of "Lnc-SOX9-2:4"
Line 42: | Line 42: | ||
sequence = <dnaseq>CGCATCCCAGGAAGAAGGAGTTGGAGCTCCGTGATGCCATTCAAAAACAGATGAGATGGGGACAGATTTAACCCAAAGGACATAGTTCAACTCCTGGTCTTGACAGAGGAGAAGCCCTCAAAGATGGAGTCTCACTCTGTTGCCAGGCTAGAATACAATGGCACGAACTTGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCGTCCTGAGTTGCTGGGACTACGGGCACACACCATCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCAGGATGGTCTCGATCTCTTGACCTCGTGATCTGCCCACGTCGGCCTCCCAAAGTCCTGGGATTACAGGCATGAGCCAGTGCGCCTAGCAAACGACAGCTTTTTGAGCCTCTGTTTAACAATCTCTTAAACCTTATAGGTAGGCAGTTCTGAGACAGCTCCTAATCATCTCCCCTCCTGGTATTCAAGCCCTGATGGAATACTCTCTTCTTCAATGTGAGCTGGACTTAGTGGTTTTCTTCTAATCCATTGAATACACACAAGTGATGAGCTGTCATTTCCAAAATTAGTTCACACAAAGCTGTAACTTTTGTTTTGTTCACAGCCTCTCTCAATTGCCTTCTCAGCTTGTATGCTTTGAAGAAGCAAGCTGCAGTGTTGGAGAGGCCCATGTGGCAAGGAAATGAGGGTGGCCTCCAGTCAATGGCTGGTGAGAAACTGAGACCTTCCTTCCAACAATTGTCAAGTAACTGAATACTCCCAACAATCATATGGGTTAGGTTAGAAGTGAACCTTTCTCTAGTTGAGGTTTCAGATAAGACCACAGATATTATACTAACACCTTGATTGCAGGCTTATGAGAAACCTTGAAATGAGAAGACTAAGTAAAACCATATCTGGATTCCTGACTTGCAGAAACTGTGTGATGATAAATGTGTGTTATCTTAAGCCACAAAGTTTTTGGGGTGATTTGTTCTACAGCAATTGATAATGAATACTTCAACCTATAGTGACAACTGGATGTCTATTTACTCATTTTCCCCACCAAAGTGTAAAGTTCCTACAAGGCAGAGGTTACAACATATTCATCCTGCTACCTCTCACAGCCCATAATATACAACCTGACCCATAAAACATGATTAATCAATGTTTGTTAAATTAACATGTATTTTGAGTTTCATTGAAATCAGTTAGTTGAAGTGATAATAACATTTAAATGTGCATGAGCAGTAGGACAAGGCAGATAGCTGGTTAGGATAGAAAGTTTTTGAAAATTGTGAGGGGAAAAATTATTTCTATTTGTACCCTGTTGTACCCAGCTTAGGTTTCAAAAACTTTCAGGGGGTTTTTATTCATTTACCAAAGACTTCAAAGTTGGTGCCTCCCCACCACTCTAAAGAGGTCTTTGCCCTTATTGACCCAACCATACTGATTTGCCTGGTGCACAGTGGGAGCTATTATAAGGAGAGGGGAGAAGAAGGAAATAGAAACAACTGTGAAAAAGGTTGAAAAAAATAGCGAAAAGGATAGAAAAAGAGCAGAGGAAAGAGAAGAAGTAGTCAACATCCAACCCAGATGCAGAGAAATGATTCAAAAGAAAAAGTCTGATTTTCCTGTCGGAAATATTTTTAAAAGGAGGTAGGCATTTATCAAAAAGGAAAAAAAAAAAAAAAGAATAACAGAGTTTGTCTTCCAAAGGACCCAATACTCTTGGAATTCAATGACCTAATTCTGTGTATGGTTGCAGTGTGGAGATTGCCTCTTGTCTGAT</dnaseq>| | sequence = <dnaseq>CGCATCCCAGGAAGAAGGAGTTGGAGCTCCGTGATGCCATTCAAAAACAGATGAGATGGGGACAGATTTAACCCAAAGGACATAGTTCAACTCCTGGTCTTGACAGAGGAGAAGCCCTCAAAGATGGAGTCTCACTCTGTTGCCAGGCTAGAATACAATGGCACGAACTTGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCGTCCTGAGTTGCTGGGACTACGGGCACACACCATCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCAGGATGGTCTCGATCTCTTGACCTCGTGATCTGCCCACGTCGGCCTCCCAAAGTCCTGGGATTACAGGCATGAGCCAGTGCGCCTAGCAAACGACAGCTTTTTGAGCCTCTGTTTAACAATCTCTTAAACCTTATAGGTAGGCAGTTCTGAGACAGCTCCTAATCATCTCCCCTCCTGGTATTCAAGCCCTGATGGAATACTCTCTTCTTCAATGTGAGCTGGACTTAGTGGTTTTCTTCTAATCCATTGAATACACACAAGTGATGAGCTGTCATTTCCAAAATTAGTTCACACAAAGCTGTAACTTTTGTTTTGTTCACAGCCTCTCTCAATTGCCTTCTCAGCTTGTATGCTTTGAAGAAGCAAGCTGCAGTGTTGGAGAGGCCCATGTGGCAAGGAAATGAGGGTGGCCTCCAGTCAATGGCTGGTGAGAAACTGAGACCTTCCTTCCAACAATTGTCAAGTAACTGAATACTCCCAACAATCATATGGGTTAGGTTAGAAGTGAACCTTTCTCTAGTTGAGGTTTCAGATAAGACCACAGATATTATACTAACACCTTGATTGCAGGCTTATGAGAAACCTTGAAATGAGAAGACTAAGTAAAACCATATCTGGATTCCTGACTTGCAGAAACTGTGTGATGATAAATGTGTGTTATCTTAAGCCACAAAGTTTTTGGGGTGATTTGTTCTACAGCAATTGATAATGAATACTTCAACCTATAGTGACAACTGGATGTCTATTTACTCATTTTCCCCACCAAAGTGTAAAGTTCCTACAAGGCAGAGGTTACAACATATTCATCCTGCTACCTCTCACAGCCCATAATATACAACCTGACCCATAAAACATGATTAATCAATGTTTGTTAAATTAACATGTATTTTGAGTTTCATTGAAATCAGTTAGTTGAAGTGATAATAACATTTAAATGTGCATGAGCAGTAGGACAAGGCAGATAGCTGGTTAGGATAGAAAGTTTTTGAAAATTGTGAGGGGAAAAATTATTTCTATTTGTACCCTGTTGTACCCAGCTTAGGTTTCAAAAACTTTCAGGGGGTTTTTATTCATTTACCAAAGACTTCAAAGTTGGTGCCTCCCCACCACTCTAAAGAGGTCTTTGCCCTTATTGACCCAACCATACTGATTTGCCTGGTGCACAGTGGGAGCTATTATAAGGAGAGGGGAGAAGAAGGAAATAGAAACAACTGTGAAAAAGGTTGAAAAAAATAGCGAAAAGGATAGAAAAAGAGCAGAGGAAAGAGAAGAAGTAGTCAACATCCAACCCAGATGCAGAGAAATGATTCAAAAGAAAAAGTCTGATTTTCCTGTCGGAAATATTTTTAAAAGGAGGTAGGCATTTATCAAAAAGGAAAAAAAAAAAAAAAGAATAACAGAGTTTGTCTTCCAAAGGACCCAATACTCTTGGAATTCAATGACCTAATTCTGTGTATGGTTGCAGTGTGGAGATTGCCTCTTGTCTGAT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-SOX9-2]] | + | [[Category:Intergenic]][[Category:lnc-SOX9-2]][[Category:Transcripts]] |
Latest revision as of 05:22, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
lnc-SOX9-2:4 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
intergenic |
Length |
1800 nt |
Genomic location |
chr17+:70026957..70035822 |
Exon number |
3 |
Exons |
70026957..70026992,70033186..70033272,70034146..70035822 |
Genome context |
|
Sequence |
000001 CGCATCCCAG GAAGAAGGAG TTGGAGCTCC GTGATGCCAT TCAAAAACAG ATGAGATGGG GACAGATTTA ACCCAAAGGA 000080
000081 CATAGTTCAA CTCCTGGTCT TGACAGAGGA GAAGCCCTCA AAGATGGAGT CTCACTCTGT TGCCAGGCTA GAATACAATG 000160 000161 GCACGAACTT GGCTCACTGC AACCTCCGCC TCCTGGGTTC AAGAGATTCT CCTGCCTCAG CGTCCTGAGT TGCTGGGACT 000240 000241 ACGGGCACAC ACCATCATGC CCAGCTAATT TTTGTATTTT TAGTAGAGAC AGGGTTTCAC CATGTTGACC AGGATGGTCT 000320 000321 CGATCTCTTG ACCTCGTGAT CTGCCCACGT CGGCCTCCCA AAGTCCTGGG ATTACAGGCA TGAGCCAGTG CGCCTAGCAA 000400 000401 ACGACAGCTT TTTGAGCCTC TGTTTAACAA TCTCTTAAAC CTTATAGGTA GGCAGTTCTG AGACAGCTCC TAATCATCTC 000480 000481 CCCTCCTGGT ATTCAAGCCC TGATGGAATA CTCTCTTCTT CAATGTGAGC TGGACTTAGT GGTTTTCTTC TAATCCATTG 000560 000561 AATACACACA AGTGATGAGC TGTCATTTCC AAAATTAGTT CACACAAAGC TGTAACTTTT GTTTTGTTCA CAGCCTCTCT 000640 000641 CAATTGCCTT CTCAGCTTGT ATGCTTTGAA GAAGCAAGCT GCAGTGTTGG AGAGGCCCAT GTGGCAAGGA AATGAGGGTG 000720 000721 GCCTCCAGTC AATGGCTGGT GAGAAACTGA GACCTTCCTT CCAACAATTG TCAAGTAACT GAATACTCCC AACAATCATA 000800 000801 TGGGTTAGGT TAGAAGTGAA CCTTTCTCTA GTTGAGGTTT CAGATAAGAC CACAGATATT ATACTAACAC CTTGATTGCA 000880 000881 GGCTTATGAG AAACCTTGAA ATGAGAAGAC TAAGTAAAAC CATATCTGGA TTCCTGACTT GCAGAAACTG TGTGATGATA 000960 000961 AATGTGTGTT ATCTTAAGCC ACAAAGTTTT TGGGGTGATT TGTTCTACAG CAATTGATAA TGAATACTTC AACCTATAGT 001040 001041 GACAACTGGA TGTCTATTTA CTCATTTTCC CCACCAAAGT GTAAAGTTCC TACAAGGCAG AGGTTACAAC ATATTCATCC 001120 001121 TGCTACCTCT CACAGCCCAT AATATACAAC CTGACCCATA AAACATGATT AATCAATGTT TGTTAAATTA ACATGTATTT 001200 001201 TGAGTTTCAT TGAAATCAGT TAGTTGAAGT GATAATAACA TTTAAATGTG CATGAGCAGT AGGACAAGGC AGATAGCTGG 001280 001281 TTAGGATAGA AAGTTTTTGA AAATTGTGAG GGGAAAAATT ATTTCTATTT GTACCCTGTT GTACCCAGCT TAGGTTTCAA 001360 001361 AAACTTTCAG GGGGTTTTTA TTCATTTACC AAAGACTTCA AAGTTGGTGC CTCCCCACCA CTCTAAAGAG GTCTTTGCCC 001440 001441 TTATTGACCC AACCATACTG ATTTGCCTGG TGCACAGTGG GAGCTATTAT AAGGAGAGGG GAGAAGAAGG AAATAGAAAC 001520 001521 AACTGTGAAA AAGGTTGAAA AAAATAGCGA AAAGGATAGA AAAAGAGCAG AGGAAAGAGA AGAAGTAGTC AACATCCAAC 001600 001601 CCAGATGCAG AGAAATGATT CAAAAGAAAA AGTCTGATTT TCCTGTCGGA AATATTTTTA AAAGGAGGTA GGCATTTATC 001680 001681 AAAAAGGAAA AAAAAAAAAA AAGAATAACA GAGTTTGTCT TCCAAAGGAC CCAATACTCT TGGAATTCAA TGACCTAATT 001760 001761 CTGTGTATGG TTGCAGTGTG GAGATTGCCT CTTGTCTGAT |