Difference between revisions of "Lnc-ZNF227-1:1"

Latest revision as of 05:44, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-ZNF227-1:1
Source	LNCipedia2.1
Same with	NONHSAT066677
Classification	intergenic
Length	3114 nt
Genomic location	chr19+:44699119..44702389
Exon number	2
Exons	44699119..44700052,44700210..44702389
Genome context
Sequence	000001 CAAATGAAGC GTGCTCACAA AAATTTTAAG CCAGGCTTGC AGAGCAAACA AAATATAAAA CCGTGTTTGC AGAAAAACCA 000080 000081 AAGCAAATTC AGTAGAAAAT ACATGCCTCA CAGAACGTAA GTTCTGTGGG AACCAGAGTA CTCTCCAAAA GAACACTTGG 000160 000161 CCTTATACCA GAAGAGGCTT TCCAGAAAAG ACAAAAAGTC TTTTGTAGTC CCACAAGGGT TGCAAGGTCC TTAATTTAAG 000240 000241 GTGGCCTTAT AGCCAAATCC AGATCCTGAA TAAAGTCAAA AGAACTTACC AAACGAAGGA CGTCTGAGAA TCTAAGCAGA 000320 000321 GATTCACCAG AGCAGAGAAG GAAGGCCATA GAAGCAGAGG CCACAAAAGG GGTCAATGTT GGTACCTCAC TAGATTCCAG 000400 000401 GGGATGCTGG CCTGTTTGAG GTCAGCTGAC TTCTTGACAC AAACTTTATG TCAACCTAAA TAGCAGACAC AGAGAGAAGA 000480 000481 TGTCTAAAAG AAAATTGTAT TTATTCAGGA ATGAGTATTG CAATGGGAAT ATAGTGGGTG TATTCAGGGA GGTAAAGAAA 000560 000561 GACAAGGGCT TTTAAAGAAG TGAGGAGGGT TACATGAGTT TTTTGAAACA ATTATCTTTG GCTACAAGGA TCACTAACAA 000640 000641 AGGTGGTAGT AGTTCAAGGT TGGACAGCCA GTTGCTGGGC AGCTGTCTTA ACCAAAGTAT TTTTGTATGT GTAAGGTTGT 000720 000721 GGTGGCCTTT GTGCAAGGTT GTTGTGATTT TTGCAGTCTT TGTGATCGTT CCTCTTATCA GGTATATGTG CATGAGAACC 000800 000801 TTCTTTTCAT CACCTTCCCT GGCTCCATTT GTCCTGCTAC GGTGACACCA GTCTTTTAGT CCATACATTT GACTTCATGA 000880 000881 GGAGTTTGCT ATAATCAATT GAATGAAGAA GAAACATGTG GACCTGCTTT ATAGGAATGA TGCCAGGGGG ATGAATAGTT 000960 000961 TTGCTGGATG GTCATGGACT TCAAAGAAGC ATGATTGATA ATTGGTTGAC AAGGCAAATT GACAATGAGG TATGTGAGTG 001040 001041 GACTACTTTT AATGAGCAGA ATATAAAATT ACTTGCGGCC TATTTAATTG TCAATAATCA GCAACCTCAC CAGAAGATGA 001120 001121 GCTTAATAAT CAGGTGATCA AGATGGTACA TTCTGTGAAT ATTCTTCAAG ATTTTTCTCT AGTCAACCAT GTCCATTCCC 001200 001201 AGTGGGTGCA TGAACAGTGT AGTCATGGTG GAAGAAATGG AGCTTATTAG TTCAGTACTA TGAAATTCCA TTTACTAAAT 001280 001281 CCAATCTGGC TACAACCACA TTTATATGGC CAAGCTATCA AAAGTATGGA CTAACACTGG ACCTCAGATA GGCACTGTTC 001360 001361 TTCAAAGGGG ACTACCAACC TCCTGCTGGA ATTTGATTAC ACCGGACCAC TTTGATCATG GAGGAGACAG CACTTTGTTT 001440 001441 TCAGTGGAAA AGACAATTAC TCTAGATATG AATTTGCCTT TCCTATTCCA ATGTTTCTGA TAAAAGCATC ACATGTGGAC 001520 001521 TTTACAAAAT GTTTTATTTT CTGCCATGGA ATTCCACCCA GCATTTCTTG TGACCAGGGC AGTCATTTTT CAAAAAATGA 001600 001601 ATTGTATCCA TTGGGCTCAT GTTGATAGAA TTCACTAAAC TTACCATGAT TCCTGTTAAC AGTTCCATTT CAGTAGTGGG 001680 001681 ACATGCCTCA ATTCTCAGAA GTCCTACCAT CTCTGATTTG TCTTCCCATG TTTGTTTACC TAATTCCTAC TTTAAAATGT 001760 001761 CCTTGTCCCT AAAATCCTAG TGATTCTGCT TCTCTGATTG AACCCTGACT GATATTGAAC CATTTCTGCT CCTTTTCAGA 001840 001841 CACTACCCCT CTCTCTCAAC TATAATCACT TTCCTAACTT CTATCACCAT TGACTACTTT TCCTTTTATC TTTATATATA 001920 001921 TGAAACCATA TTGTATATAT CCTTTTG

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 sequence = <dnaseq>CAAATGAAGCGTGCTCACAAAAATTTTAAGCCAGGCTTGCAGAGCAAACAAAATATAAAACCGTGTTTGCAGAAAAACCAAAGCAAATTCAGTAGAAAATACATGCCTCACAGAACGTAAGTTCTGTGGGAACCAGAGTACTCTCCAAAAGAACACTTGGCCTTATACCAGAAGAGGCTTTCCAGAAAAGACAAAAAGTCTTTTGTAGTCCCACAAGGGTTGCAAGGTCCTTAATTTAAGGTGGCCTTATAGCCAAATCCAGATCCTGAATAAAGTCAAAAGAACTTACCAAACGAAGGACGTCTGAGAATCTAAGCAGAGATTCACCAGAGCAGAGAAGGAAGGCCATAGAAGCAGAGGCCACAAAAGGGGTCAATGTTGGTACCTCACTAGATTCCAGGGGATGCTGGCCTGTTTGAGGTCAGCTGACTTCTTGACACAAACTTTATGTCAACCTAAATAGCAGACACAGAGAGAAGATGTCTAAAAGAAAATTGTATTTATTCAGGAATGAGTATTGCAATGGGAATATAGTGGGTGTATTCAGGGAGGTAAAGAAAGACAAGGGCTTTTAAAGAAGTGAGGAGGGTTACATGAGTTTTTTGAAACAATTATCTTTGGCTACAAGGATCACTAACAAAGGTGGTAGTAGTTCAAGGTTGGACAGCCAGTTGCTGGGCAGCTGTCTTAACCAAAGTATTTTTGTATGTGTAAGGTTGTGGTGGCCTTTGTGCAAGGTTGTTGTGATTTTTGCAGTCTTTGTGATCGTTCCTCTTATCAGGTATATGTGCATGAGAACCTTCTTTTCATCACCTTCCCTGGCTCCATTTGTCCTGCTACGGTGACACCAGTCTTTTAGTCCATACATTTGACTTCATGAGGAGTTTGCTATAATCAATTGAATGAAGAAGAAACATGTGGACCTGCTTTATAGGAATGATGCCAGGGGGATGAATAGTTTTGCTGGATGGTCATGGACTTCAAAGAAGCATGATTGATAATTGGTTGACAAGGCAAATTGACAATGAGGTATGTGAGTGGACTACTTTTAATGAGCAGAATATAAAATTACTTGCGGCCTATTTAATTGTCAATAATCAGCAACCTCACCAGAAGATGAGCTTAATAATCAGGTGATCAAGATGGTACATTCTGTGAATATTCTTCAAGATTTTTCTCTAGTCAACCATGTCCATTCCCAGTGGGTGCATGAACAGTGTAGTCATGGTGGAAGAAATGGAGCTTATTAGTTCAGTACTATGAAATTCCATTTACTAAATCCAATCTGGCTACAACCACATTTATATGGCCAAGCTATCAAAAGTATGGACTAACACTGGACCTCAGATAGGCACTGTTCTTCAAAGGGGACTACCAACCTCCTGCTGGAATTTGATTACACCGGACCACTTTGATCATGGAGGAGACAGCACTTTGTTTTCAGTGGAAAAGACAATTACTCTAGATATGAATTTGCCTTTCCTATTCCAATGTTTCTGATAAAAGCATCACATGTGGACTTTACAAAATGTTTTATTTTCTGCCATGGAATTCCACCCAGCATTTCTTGTGACCAGGGCAGTCATTTTTCAAAAAATGAATTGTATCCATTGGGCTCATGTTGATAGAATTCACTAAACTTACCATGATTCCTGTTAACAGTTCCATTTCAGTAGTGGGACATGCCTCAATTCTCAGAAGTCCTACCATCTCTGATTTGTCTTCCCATGTTTGTTTACCTAATTCCTACTTTAAAATGTCCTTGTCCCTAAAATCCTAGTGATTCTGCTTCTCTGATTGAACCCTGACTGATATTGAACCATTTCTGCTCCTTTTCAGACACTACCCCTCTCTCTCAACTATAATCACTTTCCTAACTTCTATCACCATTGACTACTTTTCCTTTTATCTTTATATATATGAAACCATATTGTATATATCCTTTTGTGTCTCTGTTTTGCCCAACATTATGTTTGTGAGATTGAACTATGCTGCTGTTTTATAGCAATTGTTTACTTATTTTGTTACTGTAGAGCAAGTGTAGGCACACTACATCCCATGGGTGAAATCTTGTATATATTTCGGGGTGCACATGTGTGTGTGTTTCTGCTTGCTAGAAGTGGAATTTCTGTGTCATGGAGAATACATAAATTTAACTCTAGCAGATACTGTGAAACATTTTCCAAAGTGATTGTACCAATTTACACTCTTACAAGGACCGTGGTAGAGTTCCATCTGCTCCACGTGCTTGCCAATGTTTGGTGTTGTCAGACTTAAATTATTTTTAAATTATTTTTTAAATTCACCATTCTAATTTTTTAAAAGAAGTAGAGTATAATGCTGGTTACCAGGGGCTGGAGTGGAGGGGTTGGGACATATTGGTCAAAAGATATAACATGTCAGTTATACACGAGTAATTTTTAAAAAATCAGTGATTCTGGTATGGCAATAGAGTTGTCTCATTGAGGGTTTAATTTATACTGCTGTAATGACTAATGAAGTTGAGCAAACAGAGCATGTATCTGAAGCCTTGTACATTTGTATATTCTTCATATAGTGCTTACTCAAGTGATTTGTTGATTTGTCTATTTGGTTGTCAGTCTTATTCTTGTATTTATAGGATTTCTTTATATTCTGCTTACAAGCCTTTTGACATATGTGTGTATTGTGATTATCTTTTCAACTGTGGCCAGCATTTTCACTTTCCTTATGGTACATTTGATAAACAACCATTCTCATTTTAAGTTTTTTAATTTTACTTTTCAGTTGGTACTTTAAAAAATCGTTGCCAACATTAGAGAAGGTCACAAAGATATTTTAGTAGCTATTTAAAAAAATCTTTTAATTTTAAGATCTATATTCCATATCATATTGATATTTACATATGGGATGTGCTAAAGGTCAAGATTAATTATTTTTCTATGTGAAGAATATACAATATCCTCACTTCTTAAGAGATTTCTCCATTTTATTATCTTTGTCAAATATCAAATGACTAGATATATGTAAATCTGTTTCTGAACTTTCTATTATCTTCCATTAGTCTATTCATATTTGCATATATAGCACACTTTTAATTACTGCAAATACATAAAATGTCTTGATGTCTTATCG</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-ZNF227-1]][[Category:NONHSAG025977]]
+[[Category:Intergenic]][[Category:lnc-ZNF227-1]][[Category:NONHSAG025977]][[Category:Transcripts]]