Difference between revisions of "NONHSAT122895"
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sequence = <dnaseq>CCATGAGGGAGATGGTGGCAGTTCAACAGGAAAATGGTAAGTTCACATCAGTTAGCATTTTGAACAAATTAATACTCCGTATGCCATCTTACCATACATTTCTTGTCTCTGCAATGAGGCTGAGCGAGACTGTCCCAAATGTGTTTTTATCCTGAGTCTGAGGCAGGCTGAACTTTAATCTGCATGATGTGCTGCAGCTTGCCATCATGTCGGGACAGCAGATCCAGTCCCTTGAGTAAGCCAGTTGGTCACAGTTCAGGAGAGGCTGAGATGATCTGTGATGAAATGATGGATGAAATGTGAAGATCCCCAGCCAATCCTTAGAGACAGGGG</dnaseq>| | sequence = <dnaseq>CCATGAGGGAGATGGTGGCAGTTCAACAGGAAAATGGTAAGTTCACATCAGTTAGCATTTTGAACAAATTAATACTCCGTATGCCATCTTACCATACATTTCTTGTCTCTGCAATGAGGCTGAGCGAGACTGTCCCAAATGTGTTTTTATCCTGAGTCTGAGGCAGGCTGAACTTTAATCTGCATGATGTGCTGCAGCTTGCCATCATGTCGGGACAGCAGATCCAGTCCCTTGAGTAAGCCAGTTGGTCACAGTTCAGGAGAGGCTGAGATGATCTGTGATGAAATGATGGATGAAATGTGAAGATCCCCAGCCAATCCTTAGAGACAGGGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG048606]] | + | [[Category:Intergenic]][[Category:NONHSAG048606]][[Category:Transcripts]] |
Latest revision as of 06:44, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT122895 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
333 nt |
| Genomic location |
chr7+:116073138..116073470 |
| Exon number |
1 |
| Exons |
116073138..116073470 |
| Genome context |
|
| Sequence |
000001 CCATGAGGGA GATGGTGGCA GTTCAACAGG AAAATGGTAA GTTCACATCA GTTAGCATTT TGAACAAATT AATACTCCGT 000080
000081 ATGCCATCTT ACCATACATT TCTTGTCTCT GCAATGAGGC TGAGCGAGAC TGTCCCAAAT GTGTTTTTAT CCTGAGTCTG 000160 000161 AGGCAGGCTG AACTTTAATC TGCATGATGT GCTGCAGCTT GCCATCATGT CGGGACAGCA GATCCAGTCC CTTGAGTAAG 000240 000241 CCAGTTGGTC ACAGTTCAGG AGAGGCTGAG ATGATCTGTG ATGAAATGAT GGATGAAATG TGAAGATCCC CAGCCAATCC 000320 000321 TTAGAGACAG GGG |
Predicted Small Protein
| Name | NONHSAT122895_smProtein_2:154 |
| Length | 51 |
| Molecular weight | 5714.7029 |
| Aromaticity | 0.08 |
| Instability index | 48.15 |
| Isoelectric point | 9.69085693359 |
| Runs | 9 |
| Runs residual | 0.0153216374269 |
| Runs probability | 0.0327975033858 |
| Amino acid sequence | MREMVAVQQENGKFTSVSILNKLILRMPSYHTFLVSAMRLSETVPNVFLS |
| Secondary structure | LEEEEHHHHLLLLEEEHHHHHHHHHHLLLHHHHHHHHHHHLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
